
PMC:3291650 / 8165-8543
Annnotations
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T908 | 362-367 | Protein | denotes | IRF-3 |
T907 | 331-338 | Positive_regulation | denotes | induced |
T906 | 326-330 | Protein | denotes | TLR3 |
T905 | 315-320 | Protein | denotes | RIG-I |
T904 | 306-314 | Regulation | denotes | regulate |
T839 | 362-367 | Protein | denotes | IRF-3 |
T838 | 326-330 | Protein | denotes | TLR3 |
T837 | 315-320 | Protein | denotes | RIG-I |
R549 | T905 | T907 | causeOf | RIG-I,induced |
R550 | T906 | T907 | causeOf | TLR3,induced |
R551 | T907 | T904 | themeOf | induced,regulate |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22396652-16765340-98461845 | 369-371 | 16765340 | denotes | 49 |
22396652-15661910-98461846 | 374-376 | 15661910 | denotes | 52 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2339 | 376-377 | -RRB- | denotes | ] |
T2338 | 374-376 | CD | denotes | 52 |
T2337 | 373-374 | -LRB- | denotes | [ |
T2336 | 372-373 | CD | denotes | – |
T2335 | 371-372 | -RRB- | denotes | ] |
T2334 | 369-371 | CD | denotes | 49 |
T2333 | 368-369 | -LRB- | denotes | [ |
T2332 | 362-367 | NN | denotes | IRF-3 |
T2331 | 358-361 | CC | denotes | and |
T2330 | 352-357 | NN | denotes | NF-κB |
T2329 | 349-351 | TO | denotes | to |
T2328 | 339-348 | NN | denotes | signaling |
T2327 | 326-338 | JJ | denotes | TLR3-induced |
T2326 | 322-325 | CC | denotes | and |
T2325 | 315-321 | NN | denotes | RIG-I- |
T2324 | 306-314 | VB | denotes | regulate |
T2323 | 302-305 | MD | denotes | may |
T2322 | 298-301 | NN | denotes | A20 |
T2321 | 293-297 | IN | denotes | that |
T2320 | 282-292 | VB | denotes | indicating |
T2319 | 280-281 | -COMMA- | denotes | , |
T2318 | 275-280 | NN | denotes | lines |
T2317 | 270-274 | NN | denotes | cell |
T2316 | 261-269 | JJ | denotes | specific |
T2315 | 258-260 | IN | denotes | in |
T2314 | 248-257 | NN | denotes | silencing |
T2313 | 245-247 | CC | denotes | or |
T2312 | 230-244 | NN | denotes | overexpression |
T2311 | 224-229 | VB | denotes | using |
T2310 | 216-223 | NN | denotes | studies |
T2309 | 210-215 | FW | denotes | vitro |
T2308 | 207-209 | FW | denotes | in |
T2307 | 204-206 | IN | denotes | of |
T2306 | 197-203 | NN | denotes | number |
T2305 | 195-196 | DT | denotes | a |
T2304 | 192-194 | TO | denotes | to |
T2303 | 184-191 | VB | denotes | limited |
T2302 | 180-183 | CC | denotes | and |
T2301 | 170-179 | VB | denotes | described |
T2300 | 165-169 | RB | denotes | well |
T2299 | 160-164 | RB | denotes | less |
T2298 | 157-159 | VB | denotes | is |
T2297 | 147-156 | NN | denotes | responses |
T2296 | 140-146 | JJ | denotes | immune |
T2295 | 130-139 | JJ | denotes | antiviral |
T2294 | 127-129 | IN | denotes | of |
T2293 | 116-126 | NN | denotes | regulation |
T2292 | 112-115 | DT | denotes | the |
T2291 | 109-111 | IN | denotes | in |
T2290 | 105-108 | NN | denotes | A20 |
T2289 | 102-104 | IN | denotes | of |
T2288 | 97-101 | NN | denotes | role |
T2287 | 93-96 | DT | denotes | the |
T2286 | 91-92 | -COMMA- | denotes | , |
T2285 | 82-91 | NN | denotes | responses |
T2284 | 66-81 | JJ | denotes | proinflammatory |
T2283 | 63-65 | IN | denotes | of |
T2282 | 52-62 | NN | denotes | regulation |
T2281 | 48-51 | DT | denotes | the |
T2280 | 45-47 | IN | denotes | in |
T2279 | 36-44 | NN | denotes | function |
T2278 | 24-35 | VB | denotes | established |
T2277 | 19-23 | RB | denotes | well |
T2276 | 15-18 | PRP-DOLLAR- | denotes | its |
T2275 | 12-14 | TO | denotes | to |
T2274 | 3-11 | NN | denotes | contrast |
T2273 | 0-2 | IN | denotes | In |
R1486 | T2273 | T2275 | arg1Of | In,to |
R1488 | T2274 | T2273 | arg2Of | contrast,In |
R1490 | T2278 | T2277 | arg1Of | established,well |
R1492 | T2279 | T2273 | arg3Of | function,In |
R1493 | T2279 | T2276 | arg1Of | function,its |
R1494 | T2279 | T2278 | arg1Of | function,established |
R1495 | T2279 | T2280 | arg1Of | function,in |
R1497 | T2282 | T2280 | arg2Of | regulation,in |
R1498 | T2282 | T2281 | arg1Of | regulation,the |
R1499 | T2282 | T2283 | arg1Of | regulation,of |
R1501 | T2285 | T2283 | arg2Of | responses,of |
R1502 | T2285 | T2284 | arg1Of | responses,proinflammatory |
R1503 | T2288 | T2287 | arg1Of | role,the |
R1504 | T2288 | T2289 | arg1Of | role,of |
R1505 | T2288 | T2291 | arg1Of | role,in |
R1506 | T2288 | T2298 | arg1Of | role,is |
R1507 | T2288 | T2301 | arg2Of | role,described |
R1508 | T2288 | T2303 | arg2Of | role,limited |
R1509 | T2290 | T2289 | arg2Of | A20,of |
R1513 | T2293 | T2291 | arg2Of | regulation,in |
R1514 | T2293 | T2292 | arg1Of | regulation,the |
R1515 | T2293 | T2294 | arg1Of | regulation,of |
R1517 | T2297 | T2294 | arg2Of | responses,of |
R1518 | T2297 | T2295 | arg1Of | responses,antiviral |
R1519 | T2297 | T2296 | arg1Of | responses,immune |
R1522 | T2300 | T2299 | arg1Of | well,less |
R1524 | T2301 | T2302 | arg1Of | described,and |
R1525 | T2302 | T2273 | arg1Of | and,In |
R1526 | T2302 | T2286 | arg1Of | and,"," |
R1527 | T2302 | T2298 | arg2Of | and,is |
R1528 | T2302 | T2300 | arg1Of | and,well |
R1529 | T2303 | T2302 | arg2Of | limited,and |
R1530 | T2303 | T2304 | arg1Of | limited,to |
R1531 | T2306 | T2304 | arg2Of | number,to |
R1532 | T2306 | T2305 | arg1Of | number,a |
R1533 | T2306 | T2307 | arg1Of | number,of |
R1534 | T2309 | T2308 | arg1Of | vitro,in |
R1535 | T2310 | T2307 | arg2Of | studies,of |
R1536 | T2310 | T2309 | arg1Of | studies,vitro |
R1537 | T2310 | T2311 | arg1Of | studies,using |
R1538 | T2311 | T2319 | arg1Of | using,"," |
R1539 | T2311 | T2320 | modOf | using,indicating |
R1541 | T2312 | T2313 | arg1Of | overexpression,or |
R1542 | T2313 | T2311 | arg2Of | or,using |
R1543 | T2313 | T2315 | arg1Of | or,in |
R1545 | T2314 | T2313 | arg2Of | silencing,or |
R1547 | T2318 | T2315 | arg2Of | lines,in |
R1548 | T2318 | T2316 | arg1Of | lines,specific |
R1549 | T2318 | T2317 | arg1Of | lines,cell |
R1551 | T2322 | T2323 | arg1Of | A20,may |
R1554 | T2322 | T2324 | arg1Of | A20,regulate |
R1556 | T2324 | T2320 | arg2Of | regulate,indicating |
R1557 | T2324 | T2321 | arg1Of | regulate,that |
R1558 | T2324 | T2323 | arg2Of | regulate,may |
R1559 | T2325 | T2326 | arg1Of | RIG-I-,and |
R1561 | T2326 | T2329 | arg1Of | and,to |
R1562 | T2326 | T2331 | arg1Of | and,and |
R1564 | T2328 | T2326 | arg2Of | signaling,and |
R1565 | T2328 | T2327 | arg1Of | signaling,TLR3-induced |
R1566 | T2330 | T2329 | arg2Of | NF-κB,to |
R1567 | T2331 | T2324 | arg2Of | and,regulate |
R1570 | T2334 | T2333 | arg2Of | 49,[ |
R1572 | T2335 | T2333 | arg3Of | ],[ |
R1573 | T2336 | T2331 | arg2Of | –,and |
R1574 | T2336 | T2332 | arg1Of | –,IRF-3 |
R1575 | T2336 | T2333 | arg1Of | –,[ |
R1576 | T2336 | T2337 | arg1Of | –,[ |
R1577 | T2338 | T2337 | arg2Of | 52,[ |
R1578 | T2339 | T2337 | arg3Of | ],[ |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1085 | 362-367 | Protein | denotes | IRF-3 |
T1084 | 326-330 | Protein | denotes | TLR3 |
T1083 | 315-320 | Protein | denotes | RIG-I |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3677 | 298-301 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
T3676 | 105-108 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
T3663 | 326-330 | http://www.uniprot.org/uniprot/O15455 | denotes | TLR3 |
T3657 | 362-367 | http://www.uniprot.org/uniprot/Q14653 | denotes | IRF-3 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1153 | 116-126 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
T1152 | 52-62 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
T1095 | 339-348 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1211 | 270-274 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T940 | 0-378 | Sentence | denotes | In contrast to its well established function in the regulation of proinflammatory responses, the role of A20 in the regulation of antiviral immune responses is less well described and limited to a number of in vitro studies using overexpression or silencing in specific cell lines, indicating that A20 may regulate RIG-I- and TLR3-induced signaling to NF-κB and IRF-3 [49]–[52]. |
T51 | 0-378 | Sentence | denotes | In contrast to its well established function in the regulation of proinflammatory responses, the role of A20 in the regulation of antiviral immune responses is less well described and limited to a number of in vitro studies using overexpression or silencing in specific cell lines, indicating that A20 may regulate RIG-I- and TLR3-induced signaling to NF-κB and IRF-3 [49]–[52]. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1338 | 362-367 | Protein | denotes | IRF-3 |
T1337 | 326-330 | Protein | denotes | TLR3 |
T1336 | 315-320 | Protein | denotes | RIG-I |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4149 | 362-367 | Protein | denotes | IRF-3 |
T4148 | 326-330 | Protein | denotes | TLR3 |
T4147 | 315-320 | Protein | denotes | RIG-I |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3738 | 362-367 | Protein | denotes | IRF-3 |
T3737 | 326-330 | Protein | denotes | TLR3 |
T3736 | 315-320 | Protein | denotes | RIG-I |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3821 | 306-314 | Regulation | denotes | regulate |
T3806 | 362-367 | Protein | denotes | IRF-3 |
T3805 | 326-330 | Protein | denotes | TLR3 |
T3804 | 315-320 | Protein | denotes | RIG-I |
R2970 | T3804 | T3821 | themeOf | RIG-I,regulate |
R2972 | T3806 | T3821 | causeOf | IRF-3,regulate |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4301 | 298-301 | Protein | denotes | A20 |
T4290 | 315-321 | Protein | denotes | RIG-I- |
T4269 | 362-367 | Protein | denotes | IRF-3 |
T4256 | 102-108 | Protein | denotes | of A20 |
T4247 | 127-156 | Entity | denotes | of antiviral immune responses |
T4222 | 326-338 | Protein | denotes | TLR3-induced |
T4202 | 352-357 | Protein | denotes | NF-κB |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3490 | 320-321 | : | denotes | - |
T3489 | 315-320 | NNP | denotes | RIG-I |
T3488 | 306-314 | VB | denotes | regulate |
T3487 | 302-305 | MD | denotes | may |
T3486 | 298-301 | NNP | denotes | A20 |
T3485 | 293-297 | IN | denotes | that |
T3484 | 282-292 | VBG | denotes | indicating |
T3483 | 280-281 | , | denotes | , |
T3482 | 275-280 | NNS | denotes | lines |
T3481 | 270-274 | NN | denotes | cell |
T3480 | 261-269 | JJ | denotes | specific |
T3479 | 258-260 | IN | denotes | in |
T3478 | 248-257 | VBG | denotes | silencing |
T3477 | 245-247 | CC | denotes | or |
T3476 | 230-244 | NN | denotes | overexpression |
T3475 | 224-229 | VBG | denotes | using |
T3474 | 216-223 | NNS | denotes | studies |
T3473 | 210-215 | NN | denotes | vitro |
T3472 | 207-209 | IN | denotes | in |
T3471 | 204-206 | IN | denotes | of |
T3470 | 197-203 | NN | denotes | number |
T3469 | 195-196 | DT | denotes | a |
T3468 | 192-194 | TO | denotes | to |
T3467 | 184-191 | VBN | denotes | limited |
T3466 | 180-183 | CC | denotes | and |
T3465 | 170-179 | VBN | denotes | described |
T3464 | 165-169 | RB | denotes | well |
T3463 | 160-164 | RBR | denotes | less |
T3462 | 157-159 | VBZ | denotes | is |
T3461 | 147-156 | NNS | denotes | responses |
T3460 | 140-146 | JJ | denotes | immune |
T3459 | 130-139 | JJ | denotes | antiviral |
T3458 | 127-129 | IN | denotes | of |
T3457 | 116-126 | NN | denotes | regulation |
T3456 | 112-115 | DT | denotes | the |
T3455 | 109-111 | IN | denotes | in |
T3454 | 105-108 | NNP | denotes | A20 |
T3453 | 102-104 | IN | denotes | of |
T3452 | 97-101 | NN | denotes | role |
T3451 | 93-96 | DT | denotes | the |
T3450 | 91-92 | , | denotes | , |
T3449 | 82-91 | NNS | denotes | responses |
T3448 | 66-81 | JJ | denotes | proinflammatory |
T3447 | 63-65 | IN | denotes | of |
T3446 | 52-62 | NN | denotes | regulation |
T3445 | 48-51 | DT | denotes | the |
T3444 | 45-47 | IN | denotes | in |
T3443 | 36-44 | NN | denotes | function |
T3442 | 24-35 | VBN | denotes | established |
T3441 | 19-23 | RB | denotes | well |
T3440 | 15-18 | PRP$ | denotes | its |
T3439 | 12-14 | TO | denotes | to |
T3438 | 3-11 | NN | denotes | contrast |
T3437 | 0-2 | IN | denotes | In |
T3504 | 377-378 | . | denotes | . |
T3503 | 376-377 | NNP | denotes | ] |
T3502 | 374-376 | CD | denotes | 52 |
T3501 | 373-374 | NNP | denotes | [ |
T3500 | 371-372 | NNP | denotes | ] |
T3499 | 369-371 | CD | denotes | 49 |
T3498 | 368-369 | NNP | denotes | [ |
T3497 | 362-367 | NNP | denotes | IRF-3 |
T3496 | 358-361 | CC | denotes | and |
T3495 | 352-357 | NNP | denotes | NF-κB |
T3494 | 349-351 | TO | denotes | to |
T3493 | 339-348 | VBG | denotes | signaling |
T3492 | 326-338 | JJ | denotes | TLR3-induced |
T3491 | 322-325 | CC | denotes | and |
R2713 | T3437 | T3462 | prep | In,is |
R2717 | T3438 | T3437 | pobj | contrast,In |
R2721 | T3439 | T3438 | prep | to,contrast |
R2723 | T3440 | T3443 | poss | its,function |
R2724 | T3441 | T3442 | advmod | well,established |
R2725 | T3442 | T3443 | amod | established,function |
R2727 | T3443 | T3439 | pobj | function,to |
R2731 | T3444 | T3443 | prep | in,function |
R2734 | T3445 | T3446 | det | the,regulation |
R2740 | T3446 | T3444 | pobj | regulation,in |
R2745 | T3447 | T3446 | prep | of,regulation |
R2749 | T3448 | T3449 | amod | proinflammatory,responses |
R2752 | T3449 | T3447 | pobj | responses,of |
R2756 | T3450 | T3443 | punct | ",",function |
R2760 | T3451 | T3452 | det | the,role |
R2765 | T3452 | T3462 | nsubj | role,is |
R2769 | T3453 | T3452 | prep | of,role |
R2772 | T3454 | T3453 | pobj | A20,of |
R2776 | T3455 | T3452 | prep | in,role |
R2781 | T3456 | T3457 | det | the,regulation |
R2785 | T3457 | T3455 | pobj | regulation,in |
R2792 | T3458 | T3457 | prep | of,regulation |
R2797 | T3459 | T3461 | amod | antiviral,responses |
R2800 | T3460 | T3461 | amod | immune,responses |
R2804 | T3461 | T3458 | pobj | responses,of |
R2808 | T3462 | T3462 | ROOT | is,is |
R2809 | T3463 | T3465 | advmod | less,described |
R2812 | T3464 | T3465 | advmod | well,described |
R2816 | T3465 | T3462 | acomp | described,is |
R2820 | T3466 | T3465 | cc | and,described |
R2823 | T3467 | T3465 | conj | limited,described |
R2827 | T3468 | T3467 | prep | to,limited |
R2830 | T3469 | T3470 | det | a,number |
R2835 | T3470 | T3468 | pobj | number,to |
R2842 | T3471 | T3470 | prep | of,number |
R2846 | T3472 | T3470 | prep | in,number |
R2850 | T3473 | T3474 | amod | vitro,studies |
R2853 | T3474 | T3472 | pobj | studies,in |
R2855 | T3475 | T3467 | advcl | using,limited |
R2856 | T3476 | T3475 | dobj | overexpression,using |
R2859 | T3477 | T3475 | cc | or,using |
R2863 | T3478 | T3475 | conj | silencing,using |
R2867 | T3479 | T3478 | prep | in,silencing |
R2871 | T3480 | T3482 | amod | specific,lines |
R2874 | T3481 | T3482 | compound | cell,lines |
R2878 | T3482 | T3479 | pobj | lines,in |
R2881 | T3483 | T3462 | punct | ",",is |
R2885 | T3484 | T3462 | advcl | indicating,is |
R2892 | T3485 | T3488 | mark | that,regulate |
R2896 | T3486 | T3488 | nsubj | A20,regulate |
R2899 | T3487 | T3488 | aux | may,regulate |
R2903 | T3488 | T3484 | ccomp | regulate,indicating |
R2904 | T3489 | T3488 | dobj | RIG-I,regulate |
R2905 | T3490 | T3489 | punct | -,RIG-I |
R2906 | T3491 | T3489 | cc | and,RIG-I |
R2907 | T3492 | T3493 | amod | TLR3-induced,signaling |
R2908 | T3493 | T3488 | dobj | signaling,regulate |
R2909 | T3494 | T3501 | prep | to,[ |
R2910 | T3495 | T3494 | pobj | NF-κB,to |
R2911 | T3496 | T3495 | cc | and,NF-κB |
R2912 | T3497 | T3498 | compound | IRF-3,[ |
R2913 | T3498 | T3495 | conj | [,NF-κB |
R2914 | T3499 | T3500 | nummod | 49,] |
R2915 | T3500 | T3501 | nmod | ],[ |
R2916 | T3501 | T3488 | xcomp | [,regulate |
R2917 | T3502 | T3503 | nummod | 52,] |
R2918 | T3503 | T3501 | dobj | ],[ |
R2919 | T3504 | T3462 | punct | .,is |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3985 | 362-367 | Protein | denotes | IRF-3 |
T3984 | 352-357 | Protein | denotes | NF-κB |
T3983 | 326-330 | Protein | denotes | TLR3 |
T3982 | 298-301 | Protein | denotes | A20 |
T3981 | 105-108 | Protein | denotes | A20 |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T771 | 362-367 | Protein | denotes | IRF-3 |
T770 | 326-330 | Protein | denotes | TLR3 |
T769 | 315-320 | Protein | denotes | RIG-I |