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PMC:3291650 / 652-928 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T181 166-169 DT denotes the
T180 163-165 IN denotes in
T179 159-162 NN denotes A20
T178 151-158 NN denotes protein
T177 133-150 JJ denotes ubiquitin-editing
T176 129-132 DT denotes the
T175 126-128 IN denotes of
T174 121-125 NN denotes role
T173 117-120 DT denotes the
T172 109-116 VB denotes examine
T171 106-108 TO denotes to
T170 101-105 NN denotes mice
T169 92-100 NN denotes knockout
T168 88-91 NN denotes A20
T167 79-87 JJ denotes specific
T166 74-78 NN denotes cell
T165 66-73 JJ denotes myeloid
T164 61-65 VB denotes used
T163 58-60 PRP denotes we
T162 53-57 RB denotes Here
T161 41-51 NN denotes strategies
T160 29-40 JJ denotes therapeutic
T159 23-28 JJ denotes novel
T158 15-22 VB denotes develop
T157 12-14 TO denotes to
T156 1-11 NN denotes importance
T195 264-270 VB denotes double
T194 261-263 TO denotes to
T193 245-260 JJ denotes hyperresponsive
T192 240-244 VB denotes were
T191 228-239 NN denotes macrophages
T190 218-227 JJ denotes deficient
T189 214-217 NN denotes A20
T188 203-212 NN denotes infection
T187 199-202 NN denotes IAV
T186 196-198 TO denotes to
T185 190-195 NN denotes cells
T184 182-189 JJ denotes myeloid
T183 179-181 IN denotes of
T182 170-178 NN denotes response
R89 T158 T157 arg1Of develop,to
R90 T161 T158 arg2Of strategies,develop
R91 T161 T159 arg1Of strategies,novel
R92 T161 T160 arg1Of strategies,therapeutic
R93 T163 T164 arg1Of we,used
R94 T163 T172 arg1Of we,examine
R95 T164 T162 arg1Of used,Here
R96 T164 T171 modOf used,to
R97 T170 T164 arg2Of mice,used
R98 T170 T165 arg1Of mice,myeloid
R99 T170 T166 arg1Of mice,cell
R100 T170 T167 arg1Of mice,specific
R101 T170 T168 arg1Of mice,A20
R102 T170 T169 arg1Of mice,knockout
R103 T172 T171 arg1Of examine,to
R104 T174 T172 arg2Of role,examine
R105 T174 T173 arg1Of role,the
R106 T174 T175 arg1Of role,of
R107 T174 T180 arg1Of role,in
R108 T179 T175 arg2Of A20,of
R109 T179 T176 arg1Of A20,the
R110 T179 T177 arg1Of A20,ubiquitin-editing
R111 T179 T178 arg1Of A20,protein
R112 T182 T180 arg2Of response,in
R113 T182 T181 arg1Of response,the
R114 T182 T183 arg1Of response,of
R115 T182 T186 arg1Of response,to
R116 T185 T183 arg2Of cells,of
R117 T185 T184 arg1Of cells,myeloid
R118 T188 T186 arg2Of infection,to
R119 T188 T187 arg1Of infection,IAV
R120 T191 T189 arg1Of macrophages,A20
R121 T191 T190 arg1Of macrophages,deficient
R122 T191 T192 arg1Of macrophages,were
R123 T191 T193 arg1Of macrophages,hyperresponsive
R124 T191 T195 arg1Of macrophages,double
R127 T193 T192 arg2Of hyperresponsive,were
R128 T195 T193 arg2Of double,hyperresponsive
R129 T195 T194 arg1Of double,to

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T538 214-217 http://www.uniprot.org/uniprot/P21580 denotes A20
T537 159-162 http://www.uniprot.org/uniprot/P21580 denotes A20
T536 88-91 http://www.uniprot.org/uniprot/P21580 denotes A20

GO-MF

Id Subject Object Predicate Lexical cue
T60 133-142 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin

GO-CC

Id Subject Object Predicate Lexical cue
T62 74-78 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T28 53-213 Sentence denotes Here we used myeloid cell specific A20 knockout mice to examine the role of the ubiquitin-editing protein A20 in the response of myeloid cells to IAV infection.
T7 53-213 Sentence denotes Here we used myeloid cell specific A20 knockout mice to examine the role of the ubiquitin-editing protein A20 in the response of myeloid cells to IAV infection.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T653 143-212 Gene_expression denotes editing protein A20 in the response of myeloid cells to IAV infection
T643 66-105 Protein denotes myeloid cell specific A20 knockout mice
T617 151-162 Protein denotes protein A20
T618 182-195 Entity denotes myeloid cells
T620 126-142 Protein denotes of the ubiquitin
T624 88-91 Protein denotes A20
T625 214-217 Protein denotes A20
T626 66-87 Entity denotes myeloid cell specific
T627 151-162 Protein denotes protein A20
T639 214-239 Entity denotes A20 deficient macrophages
R511 T617 T653 themeOf protein A20,editing protein A20 in the response of myeloid cells to IAV infection

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T430 264-270 VB denotes double
T429 261-263 TO denotes to
T428 245-260 JJ denotes hyperresponsive
T427 240-244 VBD denotes were
T426 228-239 NNS denotes macrophages
T425 218-227 JJ denotes deficient
T424 214-217 CD denotes A20
T423 212-213 . denotes .
T422 203-212 NN denotes infection
T421 199-202 NNP denotes IAV
T420 196-198 TO denotes to
T419 190-195 NNS denotes cells
T418 182-189 JJ denotes myeloid
T417 179-181 IN denotes of
T416 170-178 NN denotes response
T415 166-169 DT denotes the
T414 163-165 IN denotes in
T413 159-162 NNP denotes A20
T412 151-158 NN denotes protein
T411 133-150 JJ denotes ubiquitin-editing
T410 129-132 DT denotes the
T409 126-128 IN denotes of
T408 121-125 NN denotes role
T407 117-120 DT denotes the
T406 109-116 VB denotes examine
T405 106-108 TO denotes to
T404 101-105 NNS denotes mice
T403 92-100 NN denotes knockout
T402 88-91 NNP denotes A20
T401 79-87 JJ denotes specific
T400 74-78 NN denotes cell
T399 66-73 JJ denotes myeloid
T398 61-65 VBD denotes used
T397 58-60 PRP denotes we
T396 53-57 RB denotes Here
T395 51-52 . denotes .
T394 41-51 NNS denotes strategies
T393 29-40 JJ denotes therapeutic
T392 23-28 JJ denotes novel
T391 15-22 VB denotes develop
T390 12-14 TO denotes to
T389 1-11 NN denotes importance
R310 T390 T391 aux to,develop
R312 T392 T394 amod novel,strategies
R313 T393 T394 amod therapeutic,strategies
R314 T394 T391 dobj strategies,develop
R316 T396 T398 advmod Here,used
R317 T397 T398 nsubj we,used
R318 T398 T398 ROOT used,used
R319 T399 T400 compound myeloid,cell
R320 T400 T398 dobj cell,used
R321 T401 T404 amod specific,mice
R322 T402 T404 compound A20,mice
R323 T403 T404 compound knockout,mice
R324 T404 T400 dobj mice,cell
R325 T405 T406 aux to,examine
R326 T406 T400 advcl examine,cell
R327 T407 T408 det the,role
R328 T408 T406 dobj role,examine
R329 T409 T408 prep of,role
R330 T410 T412 det the,protein
R331 T411 T412 compound ubiquitin-editing,protein
R332 T412 T409 pobj protein,of
R333 T413 T412 appos A20,protein
R334 T414 T408 prep in,role
R335 T415 T416 det the,response
R336 T416 T414 pobj response,in
R337 T417 T416 prep of,response
R338 T418 T419 amod myeloid,cells
R339 T419 T417 pobj cells,of
R340 T420 T416 prep to,response
R341 T421 T422 compound IAV,infection
R342 T422 T420 pobj infection,to
R343 T423 T398 punct .,used
R344 T424 T426 nummod A20,macrophages
R345 T425 T426 amod deficient,macrophages
R346 T426 T427 nsubj macrophages,were
R347 T427 T427 ROOT were,were
R348 T428 T427 acomp hyperresponsive,were
R349 T429 T430 aux to,double
R350 T430 T428 xcomp double,hyperresponsive

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T572 121-125 Gene_expression denotes role
T571 121-125 Gene_expression denotes role
T570 159-162 Protein denotes A20
T569 133-158 Protein denotes ubiquitin-editing protein
R460 T570 T572 themeOf A20,role
R459 T569 T571 themeOf ubiquitin-editing protein,role

testone

Id Subject Object Predicate Lexical cue
T11 218-227 Negative_regulation denotes deficient
T10 92-100 Negative_regulation denotes knockout