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PMC:3291650 / 5581-5711 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T866 0-5 Protein denotes RIG-I
T807 0-5 Protein denotes RIG-I

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1834 122-129 NN denotes domains
T1833 117-121 NN denotes CARD
T1832 106-116 JJ denotes N-terminal
T1831 102-105 CD denotes two
T1830 98-101 CC denotes and
T1829 96-97 -COMMA- denotes ,
T1828 85-96 NN denotes recognition
T1827 78-84 NN denotes ligand
T1826 74-77 IN denotes for
T1825 65-73 VB denotes required
T1824 62-64 VB denotes is
T1823 56-61 WDT denotes which
T1822 54-55 -COMMA- denotes ,
T1821 48-54 NN denotes domain
T1820 39-47 NN denotes helicase
T1819 35-38 NN denotes box
T1818 28-34 NN denotes DExD/H
T1817 17-27 JJ denotes C-terminal
T1816 15-16 DT denotes a
T1815 6-14 VB denotes contains
T1814 0-5 NN denotes RIG-I
R1083 T1814 T1815 arg1Of RIG-I,contains
R1084 T1821 T1815 arg2Of domain,contains
R1085 T1821 T1816 arg1Of domain,a
R1086 T1821 T1817 arg1Of domain,C-terminal
R1087 T1821 T1818 arg1Of domain,DExD/H
R1088 T1821 T1819 arg1Of domain,box
R1089 T1821 T1820 arg1Of domain,helicase
R1090 T1821 T1822 arg1Of domain,","
R1091 T1821 T1823 arg1Of domain,which
R1092 T1821 T1824 arg1Of domain,is
R1093 T1821 T1825 arg2Of domain,required
R1094 T1825 T1824 arg2Of required,is
R1095 T1825 T1826 arg1Of required,for
R1096 T1828 T1827 arg1Of recognition,ligand
R1097 T1828 T1830 arg1Of recognition,and
R1098 T1830 T1826 arg2Of and,for
R1099 T1830 T1829 arg1Of and,","
R1100 T1834 T1830 arg2Of domains,and
R1101 T1834 T1831 arg1Of domains,two
R1102 T1834 T1832 arg1Of domains,N-terminal
R1103 T1834 T1833 arg1Of domains,CARD

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1053 0-5 Protein denotes RIG-I

GO-MF

Id Subject Object Predicate Lexical cue
T1172 78-84 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand

sentences

Id Subject Object Predicate Lexical cue
T926 0-130 Sentence denotes RIG-I contains a C-terminal DExD/H box helicase domain, which is required for ligand recognition, and two N-terminal CARD domains.
T37 0-130 Sentence denotes RIG-I contains a C-terminal DExD/H box helicase domain, which is required for ligand recognition, and two N-terminal CARD domains.

simple1

Id Subject Object Predicate Lexical cue
T1306 0-5 Protein denotes RIG-I

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4117 0-5 Protein denotes RIG-I

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3706 0-5 Protein denotes RIG-I

DLUT931

Id Subject Object Predicate Lexical cue
T3774 0-5 Protein denotes RIG-I

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4330 15-54 Entity denotes a C-terminal DExD/H box helicase domain
T4325 102-116 Entity denotes two N-terminal
T4279 39-47 Protein denotes helicase
T4260 102-129 Entity denotes two N-terminal CARD domains
T4246 78-84 Entity denotes ligand
T4232 15-54 Entity denotes a C-terminal DExD/H box helicase domain
T4226 0-5 Protein denotes RIG-I
T4209 15-54 Entity denotes a C-terminal DExD/H box helicase domain

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2988 129-130 . denotes .
T2987 122-129 NNS denotes domains
T2986 117-121 NNP denotes CARD
T2985 106-116 JJ denotes N-terminal
T2984 102-105 CD denotes two
T2983 98-101 CC denotes and
T2982 96-97 , denotes ,
T2981 85-96 NN denotes recognition
T2980 78-84 NN denotes ligand
T2979 74-77 IN denotes for
T2978 65-73 VBN denotes required
T2977 62-64 VBZ denotes is
T2976 56-61 WDT denotes which
T2975 54-55 , denotes ,
T2974 48-54 NN denotes domain
T2973 39-47 NN denotes helicase
T2972 35-38 NN denotes box
T2971 28-34 NNP denotes DExD/H
T2970 17-27 JJ denotes C-terminal
T2969 15-16 DT denotes a
T2968 6-14 VBZ denotes contains
T2967 0-5 NNP denotes RIG-I
R2234 T2967 T2968 nsubj RIG-I,contains
R2236 T2968 T2968 ROOT contains,contains
R2237 T2969 T2974 det a,domain
R2238 T2970 T2972 amod C-terminal,box
R2240 T2971 T2972 compound DExD/H,box
R2241 T2972 T2974 compound box,domain
R2242 T2973 T2974 compound helicase,domain
R2243 T2974 T2968 dobj domain,contains
R2246 T2975 T2974 punct ",",domain
R2248 T2976 T2978 nsubjpass which,required
R2249 T2977 T2978 auxpass is,required
R2250 T2978 T2974 relcl required,domain
R2252 T2979 T2978 prep for,required
R2253 T2980 T2981 compound ligand,recognition
R2254 T2981 T2979 pobj recognition,for
R2256 T2982 T2974 punct ",",domain
R2257 T2983 T2974 cc and,domain
R2258 T2984 T2987 nummod two,domains
R2260 T2985 T2986 compound N-terminal,CARD
R2261 T2986 T2987 compound CARD,domains
R2262 T2987 T2974 conj domains,domain
R2263 T2988 T2968 punct .,contains

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3935 28-47 Protein denotes DExD/H box helicase

testone

Id Subject Object Predicate Lexical cue
T739 0-5 Protein denotes RIG-I