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PMC:3291650 / 421-676 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T20 42-47 Protein denotes RIG-I
T19 12-41 Protein denotes pathogen recognition receptor
T15 42-47 Protein denotes RIG-I
T14 12-41 Protein denotes pathogen recognition receptor

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T158 246-253 VB denotes develop
T157 243-245 TO denotes to
T156 232-242 NN denotes importance
T155 228-231 JJ denotes key
T154 225-227 IN denotes of
T153 222-224 VB denotes is
T152 214-221 NN denotes viruses
T151 208-213 JJ denotes other
T150 204-207 CC denotes and
T149 200-203 NN denotes IAV
T148 197-199 TO denotes to
T147 187-196 NN denotes responses
T146 180-186 JJ denotes immune
T145 173-179 JJ denotes innate
T144 164-172 VB denotes regulate
T143 159-163 WDT denotes that
T142 148-158 NN denotes mechanisms
T141 144-147 DT denotes the
T140 130-143 VB denotes Understanding
T139 118-128 NN denotes interferon
T138 108-117 JJ denotes antiviral
T137 104-107 CC denotes and
T136 94-103 NN denotes cytokines
T135 78-93 JJ denotes proinflammatory
T134 75-77 IN denotes of
T133 64-74 NN denotes production
T132 60-63 DT denotes the
T131 52-59 VB denotes induces
T130 48-51 CC denotes and
T129 42-47 NN denotes RIG-I
T128 33-41 NN denotes receptor
T127 21-32 NN denotes recognition
T126 12-20 NN denotes pathogen
R59 T129 T126 arg1Of RIG-I,pathogen
R60 T129 T127 arg1Of RIG-I,recognition
R61 T129 T128 arg1Of RIG-I,receptor
R62 T131 T130 arg2Of induces,and
R63 T133 T131 arg2Of production,induces
R64 T133 T132 arg1Of production,the
R65 T133 T134 arg1Of production,of
R66 T136 T135 arg1Of cytokines,proinflammatory
R67 T136 T137 arg1Of cytokines,and
R68 T137 T134 arg2Of and,of
R69 T139 T137 arg2Of interferon,and
R70 T139 T138 arg1Of interferon,antiviral
R71 T140 T153 arg1Of Understanding,is
R72 T140 T154 arg1Of Understanding,of
R73 T142 T140 arg2Of mechanisms,Understanding
R74 T142 T141 arg1Of mechanisms,the
R75 T142 T143 arg1Of mechanisms,that
R76 T142 T144 arg1Of mechanisms,regulate
R77 T147 T144 arg2Of responses,regulate
R78 T147 T145 arg1Of responses,innate
R79 T147 T146 arg1Of responses,immune
R80 T147 T148 arg1Of responses,to
R81 T149 T150 arg1Of IAV,and
R82 T150 T148 arg2Of and,to
R83 T152 T150 arg2Of viruses,and
R84 T152 T151 arg1Of viruses,other
R85 T153 T157 modOf is,to
R86 T154 T153 arg2Of of,is
R87 T156 T154 arg2Of importance,of
R88 T156 T155 arg1Of importance,key
R89 T158 T157 arg1Of develop,to

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T41 12-41 Protein denotes pathogen recognition receptor
T42 42-47 Protein denotes RIG-I

GO-BP

Id Subject Object Predicate Lexical cue
T58 180-196 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T46 173-196 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune responses
T48 173-196 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune responses
T50 173-196 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune responses
T52 173-196 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune responses
T54 173-196 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune responses
T56 173-196 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune responses

simple1

Id Subject Object Predicate Lexical cue
T67 42-47 Protein denotes RIG-I
T66 12-41 Protein denotes pathogen recognition receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T608 12-41 Protein denotes pathogen recognition receptor
T609 42-47 Protein denotes RIG-I

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T543 12-41 Protein denotes pathogen recognition receptor
T544 42-47 Protein denotes RIG-I

DLUT931

Id Subject Object Predicate Lexical cue
T550 12-41 Protein denotes pathogen recognition receptor
T551 42-47 Protein denotes RIG-I

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T651 60-128 Gene_expression denotes the production of proinflammatory cytokines and antiviral interferon
T650 60-128 Gene_expression denotes the production of proinflammatory cytokines and antiviral interferon
T615 78-103 Protein denotes proinflammatory cytokines
T623 108-117 Entity denotes antiviral
T628 108-128 Protein denotes antiviral interferon
R510 T615 T651 themeOf proinflammatory cytokines,the production of proinflammatory cytokines and antiviral interferon
R513 T628 T650 themeOf antiviral interferon,the production of proinflammatory cytokines and antiviral interferon

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T391 246-253 VB denotes develop
T390 243-245 TO denotes to
T389 232-242 NN denotes importance
T388 228-231 JJ denotes key
T387 225-227 IN denotes of
T386 222-224 VBZ denotes is
T385 214-221 NNS denotes viruses
T384 208-213 JJ denotes other
T383 204-207 CC denotes and
T382 200-203 NNP denotes IAV
T381 197-199 TO denotes to
T380 187-196 NNS denotes responses
T379 180-186 JJ denotes immune
T378 173-179 JJ denotes innate
T377 164-172 VBP denotes regulate
T376 159-163 WDT denotes that
T375 148-158 NNS denotes mechanisms
T374 144-147 DT denotes the
T373 130-143 VBG denotes Understanding
T372 128-129 . denotes .
T371 118-128 NN denotes interferon
T370 108-117 JJ denotes antiviral
T369 104-107 CC denotes and
T368 94-103 NNS denotes cytokines
T367 78-93 JJ denotes proinflammatory
T366 75-77 IN denotes of
T365 64-74 NN denotes production
T364 60-63 DT denotes the
T363 52-59 VBZ denotes induces
T362 48-51 CC denotes and
T361 42-47 NNP denotes RIG-I
T360 33-41 NN denotes receptor
T359 21-32 NN denotes recognition
T358 12-20 NN denotes pathogen
R278 T358 T359 compound pathogen,recognition
R280 T360 T361 compound receptor,RIG-I
R281 T361 T359 appos RIG-I,recognition
R284 T364 T365 det the,production
R285 T365 T363 dobj production,induces
R286 T366 T365 prep of,production
R287 T367 T368 amod proinflammatory,cytokines
R288 T368 T366 pobj cytokines,of
R289 T369 T368 cc and,cytokines
R290 T370 T371 amod antiviral,interferon
R291 T371 T368 conj interferon,cytokines
R293 T373 T386 csubj Understanding,is
R294 T374 T375 det the,mechanisms
R295 T375 T373 dobj mechanisms,Understanding
R296 T376 T377 nsubj that,regulate
R297 T377 T375 relcl regulate,mechanisms
R298 T378 T380 amod innate,responses
R299 T379 T380 amod immune,responses
R300 T380 T377 dobj responses,regulate
R301 T381 T380 prep to,responses
R302 T382 T381 pobj IAV,to
R303 T383 T382 cc and,IAV
R304 T384 T385 amod other,viruses
R305 T385 T382 conj viruses,IAV
R306 T386 T386 ROOT is,is
R307 T387 T386 prep of,is
R308 T388 T389 amod key,importance
R309 T389 T387 pobj importance,of
R310 T390 T391 aux to,develop
R311 T391 T386 advcl develop,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T568 52-59 Positive_regulation denotes induces
T567 64-74 Gene_expression denotes production
T566 118-128 Protein denotes interferon
T565 42-47 Protein denotes RIG-I
R457 T566 T567 themeOf interferon,production
R458 T567 T568 themeOf production,induces

testone

Id Subject Object Predicate Lexical cue
T7 42-47 Protein denotes RIG-I
T6 12-41 Protein denotes pathogen recognition receptor