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PMC:3291650 / 39159-39558 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T17823 364-368 Protein denotes CD16
T17822 336-340 Protein denotes IFNγ
T17821 315-319 Protein denotes CD8α
T17820 277-281 Protein denotes Ly6G
T17819 207-210 Protein denotes CD3
T17818 162-172 Protein denotes Granzyme B
T17817 143-148 Protein denotes CD62L
T17815 364-368 Protein denotes CD16
T17814 336-340 Protein denotes IFNγ
T17813 315-319 Protein denotes CD8α
T17812 277-281 Protein denotes Ly6G
T17811 207-210 Protein denotes CD3
T17810 162-172 Protein denotes Granzyme B
T17809 143-148 Protein denotes CD62L

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17847 364-368 Protein denotes CD16
T17846 336-340 Protein denotes IFNγ
T17845 315-319 Protein denotes CD8α
T17844 277-281 Protein denotes Ly6G
T17843 207-210 Protein denotes CD3
T17842 162-172 Protein denotes Granzyme B
T17841 143-148 Protein denotes CD62L

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18149 207-210 http://www.uniprot.org/uniprot/P09693 denotes CD3
T18148 207-210 http://www.uniprot.org/uniprot/P07766 denotes CD3
T18147 207-210 http://www.uniprot.org/uniprot/P04234 denotes CD3
T18146 207-210 http://www.uniprot.org/uniprot/P20963 denotes CD3
T18145 143-148 http://www.uniprot.org/uniprot/P14151 denotes CD62L

GO-MF

Id Subject Object Predicate Lexical cue
T17848 35-45 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T17852 298-301 http://purl.obolibrary.org/obo/GO_0005680 denotes APC
T17851 132-135 http://purl.obolibrary.org/obo/GO_0005680 denotes APC
T17850 35-45 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T17849 35-45 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T253 0-399 Sentence denotes Cells were stained with monoclonal antibodies directed against MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5.5 (N418), F4/80 APC (BM8), CD62L PE (MEL-14), Granzyme B FITC (NGZB) from eBiosciences and CD3 Molecular Complex Horizon v450 (17A2), Ly6C Horizon v450 (AL-21), Ly6G PE (1A8), CD11b APC-Cy7 (M1/70), CD8α PerCP (53-6.7), IFNγ Alexa 647 (XMG1.2) and CD16/32 (2.4G2) from BD Pharmingen.

simple1

Id Subject Object Predicate Lexical cue
T17869 364-368 Protein denotes CD16
T17868 336-340 Protein denotes IFNγ
T17867 315-319 Protein denotes CD8α
T17866 277-281 Protein denotes Ly6G
T17865 207-210 Protein denotes CD3
T17864 162-172 Protein denotes Granzyme B
T17863 143-148 Protein denotes CD62L

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T18199 364-368 Protein denotes CD16
T18198 336-340 Protein denotes IFNγ
T18197 315-319 Protein denotes CD8α
T18196 277-281 Protein denotes Ly6G
T18195 207-210 Protein denotes CD3
T18194 162-172 Protein denotes Granzyme B
T18193 143-148 Protein denotes CD62L

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18157 364-368 Protein denotes CD16
T18156 336-340 Protein denotes IFNγ
T18155 315-319 Protein denotes CD8α
T18154 277-281 Protein denotes Ly6G
T18153 207-210 Protein denotes CD3
T18152 162-172 Protein denotes Granzyme B
T18151 143-148 Protein denotes CD62L

DLUT931

Id Subject Object Predicate Lexical cue
T18162 277-281 Protein denotes Ly6G
T18161 207-210 Protein denotes CD3
T18160 162-172 Protein denotes Granzyme B
T18159 143-148 Protein denotes CD62L
T18165 364-368 Protein denotes CD16
T18164 336-340 Protein denotes IFNγ
T18163 315-319 Protein denotes CD8α

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18225 126-135 Protein denotes F4/80 APC
T18222 63-115 Protein denotes MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5
T18221 364-379 Protein denotes CD16/32 (2.4G2)
T18220 0-5 Entity denotes Cells
T18218 80-99 Entity denotes FITC (M5/114.15.2),
T18217 277-291 Protein denotes Ly6G PE (1A8),
T18215 162-184 Entity denotes Granzyme B FITC (NGZB)
T18214 24-45 Protein denotes monoclonal antibodies
T18213 277-281 Protein denotes Ly6G
T18211 162-170 Protein denotes Granzyme
T18209 71-74 Entity denotes I-A
T18208 143-161 Protein denotes CD62L PE (MEL-14),
T18207 336-340 Protein denotes IFNγ
T18204 315-319 Protein denotes CD8α
T18202 207-210 Protein denotes CD3
T18200 143-148 Protein denotes CD62L

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18115 398-399 . denotes .
T18114 388-398 NNP denotes Pharmingen
T18113 385-387 NNP denotes BD
T18112 380-384 IN denotes from
T18111 378-379 -RRB- denotes )
T18110 376-378 NNP denotes G2
T18109 373-376 CD denotes 2.4
T18108 372-373 -LRB- denotes (
T18107 364-371 NNP denotes CD16/32
T18106 360-363 CC denotes and
T18105 358-359 -RRB- denotes )
T18104 356-358 CD denotes .2
T18103 352-356 NNP denotes XMG1
T18102 351-352 -LRB- denotes (
T18101 347-350 CD denotes 647
T18100 341-346 NNP denotes Alexa
T18099 336-340 NNP denotes IFNγ
T18098 334-335 , denotes ,
T18097 333-334 -RRB- denotes )
T18096 331-333 CD denotes .7
T18095 327-331 CD denotes 53-6
T18094 326-327 -LRB- denotes (
T18093 320-325 NNP denotes PerCP
T18092 315-319 NNP denotes CD8α
T18091 313-314 , denotes ,
T18090 312-313 -RRB- denotes )
T18089 307-312 NNP denotes M1/70
T18088 306-307 -LRB- denotes (
T18087 298-305 NNP denotes APC-Cy7
T18086 292-297 NNP denotes CD11b
T18085 290-291 , denotes ,
T18084 289-290 -RRB- denotes )
T18083 286-289 NNP denotes 1A8
T18082 285-286 -LRB- denotes (
T18081 282-284 NNP denotes PE
T18080 277-281 NNP denotes Ly6G
T18079 275-276 , denotes ,
T18078 274-275 -RRB- denotes )
T18077 269-274 NN denotes AL-21
T18076 268-269 -LRB- denotes (
T18075 263-267 CD denotes v450
T18074 255-262 NNP denotes Horizon
T18073 250-254 NNP denotes Ly6C
T18072 248-249 , denotes ,
T18071 247-248 -RRB- denotes )
T18070 243-247 NNP denotes 17A2
T18069 242-243 -LRB- denotes (
T18068 237-241 NN denotes v450
T18067 229-236 NNP denotes Horizon
T18066 221-228 JJ denotes Complex
T18065 211-220 NNP denotes Molecular
T18064 207-210 NNP denotes CD3
T18063 203-206 CC denotes and
T18062 190-202 NNPS denotes eBiosciences
T18061 185-189 IN denotes from
T18060 183-184 -RRB- denotes )
T18059 179-183 NNP denotes NGZB
T18058 178-179 -LRB- denotes (
T18057 173-177 NNP denotes FITC
T18056 171-172 NNP denotes B
T18055 162-170 NNP denotes Granzyme
T18054 160-161 , denotes ,
T18053 159-160 -RRB- denotes )
T18052 153-159 NNP denotes MEL-14
T18051 152-153 -LRB- denotes (
T18050 149-151 NNP denotes PE
T18049 143-148 NNP denotes CD62L
T18048 141-142 , denotes ,
T18047 140-141 -RRB- denotes )
T18046 137-140 NNP denotes BM8
T18045 136-137 -LRB- denotes (
T18044 132-135 NNP denotes APC
T18043 126-131 NNP denotes F4/80
T18042 124-125 , denotes ,
T18041 123-124 -RRB- denotes )
T18040 119-123 NN denotes N418
T18039 118-119 -LRB- denotes (
T18038 115-117 CD denotes .5
T18037 106-115 NNP denotes PerCP-Cy5
T18036 100-105 NNP denotes CD11c
T18035 98-99 , denotes ,
T18034 97-98 -RRB- denotes )
T18033 92-97 CD denotes .15.2
T18032 86-92 NNP denotes M5/114
T18031 85-86 -LRB- denotes (
T18030 80-84 NNP denotes FITC
T18029 78-79 -RRB- denotes )
T18028 71-78 NNP denotes I-A/I-E
T18027 70-71 -LRB- denotes (
T18024 46-54 VBN denotes directed
T18023 35-45 NNS denotes antibodies
T18022 24-34 JJ denotes monoclonal
T18021 19-23 IN denotes with
T18020 11-18 VBN denotes stained
T18019 6-10 VBD denotes were
T18026 63-69 NNP denotes MHC-II
T18025 55-62 IN denotes against
T18018 0-5 NNS denotes Cells
R13659 T18018 T18020 nsubjpass Cells,stained
R13660 T18019 T18020 auxpass were,stained
R13661 T18020 T18020 ROOT stained,stained
R13662 T18021 T18020 prep with,stained
R13663 T18022 T18023 amod monoclonal,antibodies
R13664 T18023 T18021 pobj antibodies,with
R13665 T18024 T18020 conj directed,stained
R13666 T18025 T18024 prep against,directed
R13667 T18026 T18025 pobj MHC-II,against
R13668 T18027 T18026 punct (,MHC-II
R13669 T18028 T18026 appos I-A/I-E,MHC-II
R13670 T18029 T18026 punct ),MHC-II
R13671 T18030 T18026 conj FITC,MHC-II
R13672 T18031 T18030 punct (,FITC
R13673 T18032 T18030 appos M5/114,FITC
R13674 T18033 T18032 nummod .15.2,M5/114
R13675 T18034 T18030 punct ),FITC
R13676 T18035 T18024 punct ",",directed
R13677 T18036 T18037 compound CD11c,PerCP-Cy5
R13678 T18037 T18038 compound PerCP-Cy5,.5
R13679 T18038 T18040 nummod .5,N418
R13680 T18039 T18040 punct (,N418
R13681 T18040 T18020 npadvmod N418,stained
R13682 T18041 T18040 punct ),N418
R13683 T18042 T18040 punct ",",N418
R13684 T18043 T18044 compound F4/80,APC
R13685 T18044 T18040 appos APC,N418
R13686 T18045 T18046 punct (,BM8
R13687 T18046 T18044 appos BM8,APC
R13688 T18047 T18046 punct ),BM8
R13689 T18048 T18044 punct ",",APC
R13690 T18049 T18050 compound CD62L,PE
R13691 T18050 T18044 appos PE,APC
R13692 T18051 T18052 punct (,MEL-14
R13693 T18052 T18050 appos MEL-14,PE
R13694 T18053 T18050 punct ),PE
R13695 T18054 T18044 punct ",",APC
R13696 T18055 T18057 compound Granzyme,FITC
R13697 T18056 T18057 compound B,FITC
R13698 T18057 T18044 appos FITC,APC
R13699 T18058 T18059 punct (,NGZB
R13700 T18059 T18057 appos NGZB,FITC
R13701 T18060 T18057 punct ),FITC
R13702 T18061 T18057 prep from,FITC
R13703 T18062 T18061 pobj eBiosciences,from
R13704 T18063 T18062 cc and,eBiosciences
R13705 T18064 T18065 compound CD3,Molecular
R13706 T18065 T18062 conj Molecular,eBiosciences
R13707 T18066 T18068 amod Complex,v450
R13708 T18067 T18068 compound Horizon,v450
R13709 T18068 T18065 appos v450,Molecular
R13710 T18069 T18070 punct (,17A2
R13711 T18070 T18068 appos 17A2,v450
R13712 T18071 T18070 punct ),17A2
R13713 T18072 T18065 punct ",",Molecular
R13714 T18073 T18074 compound Ly6C,Horizon
R13715 T18074 T18065 appos Horizon,Molecular
R13716 T18075 T18074 nummod v450,Horizon
R13717 T18076 T18077 punct (,AL-21
R13718 T18077 T18074 appos AL-21,Horizon
R13719 T18078 T18077 punct ),AL-21
R13720 T18079 T18074 punct ",",Horizon
R13721 T18080 T18081 compound Ly6G,PE
R13722 T18081 T18065 appos PE,Molecular
R13723 T18082 T18083 punct (,1A8
R13724 T18083 T18081 appos 1A8,PE
R13725 T18084 T18081 punct ),PE
R13726 T18085 T18065 punct ",",Molecular
R13727 T18086 T18087 compound CD11b,APC-Cy7
R13728 T18087 T18065 appos APC-Cy7,Molecular
R13729 T18088 T18089 punct (,M1/70
R13730 T18089 T18087 appos M1/70,APC-Cy7
R13731 T18090 T18087 punct ),APC-Cy7
R13732 T18091 T18065 punct ",",Molecular
R13733 T18092 T18093 compound CD8α,PerCP
R13734 T18093 T18065 appos PerCP,Molecular
R13735 T18094 T18095 punct (,53-6
R13736 T18095 T18096 nummod 53-6,.7
R13737 T18096 T18093 appos .7,PerCP
R13738 T18097 T18093 punct ),PerCP
R13739 T18098 T18065 punct ",",Molecular
R13740 T18099 T18100 compound IFNγ,Alexa
R13741 T18100 T18065 appos Alexa,Molecular
R13742 T18101 T18100 nummod 647,Alexa
R13743 T18102 T18103 punct (,XMG1
R13744 T18103 T18100 appos XMG1,Alexa
R13745 T18104 T18103 nummod .2,XMG1
R13746 T18105 T18103 punct ),XMG1
R13747 T18106 T18100 cc and,Alexa
R13748 T18107 T18100 conj CD16/32,Alexa
R13749 T18108 T18110 punct (,G2
R13750 T18109 T18110 nummod 2.4,G2
R13751 T18110 T18107 appos G2,CD16/32
R13752 T18111 T18110 punct ),G2
R13753 T18112 T18110 prep from,G2
R13754 T18113 T18114 compound BD,Pharmingen
R13755 T18114 T18112 pobj Pharmingen,from
R13756 T18115 T18040 punct .,N418

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T18182 385-398 Protein denotes BD Pharmingen
T18181 315-350 Protein denotes CD8α PerCP (53-6.7), IFNγ Alexa 647
T18180 292-297 Protein denotes CD11b
T18179 286-289 Protein denotes 1A8
T18178 277-284 Protein denotes Ly6G PE
T18177 250-267 Protein denotes Ly6C Horizon v450
T18176 143-148 Protein denotes CD62L
T18175 100-105 Protein denotes CD11c

testone

Id Subject Object Predicate Lexical cue
T17807 364-368 Protein denotes CD16
T17806 336-340 Protein denotes IFNγ
T17805 315-319 Protein denotes CD8α
T17804 277-281 Protein denotes Ly6G
T17803 207-210 Protein denotes CD3
T17802 162-172 Protein denotes Granzyme B
T17801 143-148 Protein denotes CD62L