
PMC:3291650 / 38846-39727
Annnotations
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17823 | 677-681 | Protein | denotes | CD16 |
T17822 | 649-653 | Protein | denotes | IFNγ |
T17821 | 628-632 | Protein | denotes | CD8α |
T17820 | 590-594 | Protein | denotes | Ly6G |
T17819 | 520-523 | Protein | denotes | CD3 |
T17818 | 475-485 | Protein | denotes | Granzyme B |
T17817 | 456-461 | Protein | denotes | CD62L |
T17816 | 40-59 | Protein | denotes | collagenase type IV |
T17815 | 677-681 | Protein | denotes | CD16 |
T17814 | 649-653 | Protein | denotes | IFNγ |
T17813 | 628-632 | Protein | denotes | CD8α |
T17812 | 590-594 | Protein | denotes | Ly6G |
T17811 | 520-523 | Protein | denotes | CD3 |
T17810 | 475-485 | Protein | denotes | Granzyme B |
T17809 | 456-461 | Protein | denotes | CD62L |
T17808 | 40-59 | Protein | denotes | collagenase type IV |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17943 | 861-865 | JJ | denotes | live |
T17942 | 853-860 | IN | denotes | between |
T17941 | 840-852 | VB | denotes | discriminate |
T17940 | 837-839 | TO | denotes | to |
T17939 | 832-836 | VB | denotes | used |
T17938 | 828-831 | VB | denotes | was |
T17937 | 821-827 | NN | denotes | iodide |
T17936 | 811-820 | NN | denotes | Propidium |
T17935 | 307-311 | NN | denotes | EDTA |
T17934 | 304-306 | NN | denotes | mM |
T17933 | 302-303 | CD | denotes | 1 |
T17932 | 297-301 | IN | denotes | with |
T17931 | 292-296 | NN | denotes | HBSS |
T17930 | 287-291 | IN | denotes | with |
T17929 | 281-286 | NN | denotes | times |
T17928 | 279-280 | CD | denotes | 4 |
T17927 | 271-278 | VB | denotes | flushed |
T17926 | 267-270 | VB | denotes | was |
T17925 | 261-266 | NN | denotes | lumen |
T17924 | 254-260 | NN | denotes | airway |
T17923 | 250-253 | CC | denotes | and |
T17922 | 240-249 | VB | denotes | canulated |
T17921 | 235-239 | VB | denotes | were |
T17920 | 227-234 | NN | denotes | trachea |
T17919 | 225-226 | -COMMA- | denotes | , |
T17918 | 222-225 | NN | denotes | BAL |
T17917 | 219-221 | IN | denotes | of |
T17916 | 207-218 | NN | denotes | preparation |
T17915 | 203-206 | DT | denotes | the |
T17914 | 199-202 | IN | denotes | For |
T17913 | 193-197 | NN | denotes | mesh |
T17912 | 187-192 | NN | denotes | nylon |
T17911 | 184-186 | NN | denotes | µm |
T17910 | 181-183 | CD | denotes | 40 |
T17909 | 177-180 | CC | denotes | and |
T17908 | 174-176 | NN | denotes | µm |
T17907 | 171-173 | CD | denotes | 70 |
T17906 | 169-170 | DT | denotes | a |
T17905 | 161-168 | IN | denotes | through |
T17904 | 152-160 | VB | denotes | filtered |
T17903 | 147-151 | VB | denotes | were |
T17902 | 139-146 | NN | denotes | samples |
T17901 | 137-138 | -COMMA- | denotes | , |
T17900 | 125-137 | RB | denotes | Subsequently |
T17899 | 120-123 | NN | denotes | min |
T17898 | 117-119 | CD | denotes | 30 |
T17897 | 113-116 | IN | denotes | for |
T17896 | 108-112 | NN | denotes | 37°C |
T17895 | 105-107 | IN | denotes | at |
T17894 | 103-104 | -RRB- | denotes | ) |
T17893 | 98-103 | NNP | denotes | Roche |
T17892 | 96-97 | -COLON- | denotes | ; |
T17891 | 92-96 | NN | denotes | U/ml |
T17890 | 88-91 | CD | denotes | 100 |
T17889 | 87-88 | -LRB- | denotes | ( |
T17888 | 81-86 | NN | denotes | DNAse |
T17887 | 77-80 | CC | denotes | and |
T17886 | 75-76 | -RRB- | denotes | ) |
T17885 | 70-75 | NNP | denotes | Sigma |
T17884 | 68-69 | -COLON- | denotes | ; |
T17883 | 63-68 | NN | denotes | mg/ml |
T17882 | 61-62 | CD | denotes | 1 |
T17881 | 60-61 | -LRB- | denotes | ( |
T17880 | 57-59 | CD | denotes | IV |
T17879 | 52-56 | NN | denotes | type |
T17878 | 40-51 | NN | denotes | collagenase |
T17877 | 35-39 | IN | denotes | with |
T17876 | 25-34 | VB | denotes | incubated |
T17875 | 21-24 | CC | denotes | and |
T17874 | 11-20 | VB | denotes | dissected |
T17873 | 6-10 | VB | denotes | were |
T17872 | 0-5 | NN | denotes | Lungs |
T17946 | 875-880 | NN | denotes | cells |
T17945 | 870-874 | JJ | denotes | dead |
T17944 | 866-869 | CC | denotes | and |
R13509 | T17872 | T17873 | arg1Of | Lungs,were |
R13510 | T17872 | T17874 | arg2Of | Lungs,dissected |
R13511 | T17872 | T17876 | arg2Of | Lungs,incubated |
R13512 | T17874 | T17875 | arg1Of | dissected,and |
R13513 | T17875 | T17873 | arg2Of | and,were |
R13514 | T17876 | T17875 | arg2Of | incubated,and |
R13515 | T17876 | T17877 | arg1Of | incubated,with |
R13516 | T17876 | T17897 | arg1Of | incubated,for |
R13517 | T17879 | T17878 | arg1Of | type,collagenase |
R13518 | T17879 | T17880 | arg1Of | type,IV |
R13519 | T17879 | T17881 | arg1Of | type,( |
R13520 | T17879 | T17887 | arg1Of | type,and |
R13521 | T17883 | T17881 | arg2Of | mg/ml,( |
R13522 | T17883 | T17882 | arg1Of | mg/ml,1 |
R13523 | T17883 | T17884 | arg1Of | mg/ml,; |
R13524 | T17885 | T17884 | arg2Of | Sigma,; |
R13525 | T17886 | T17881 | arg3Of | ),( |
R13526 | T17887 | T17877 | arg2Of | and,with |
R13527 | T17888 | T17887 | arg2Of | DNAse,and |
R13528 | T17888 | T17889 | arg1Of | DNAse,( |
R13529 | T17888 | T17895 | arg1Of | DNAse,at |
R13530 | T17891 | T17889 | arg2Of | U/ml,( |
R13531 | T17891 | T17890 | arg1Of | U/ml,100 |
R13532 | T17891 | T17892 | arg1Of | U/ml,; |
R13533 | T17893 | T17892 | arg2Of | Roche,; |
R13534 | T17894 | T17889 | arg3Of | ),( |
R13535 | T17896 | T17895 | arg2Of | 37°C,at |
R13536 | T17899 | T17897 | arg2Of | min,for |
R13537 | T17899 | T17898 | arg1Of | min,30 |
R13538 | T17902 | T17903 | arg1Of | samples,were |
R13539 | T17902 | T17904 | arg2Of | samples,filtered |
R13540 | T17904 | T17900 | arg1Of | filtered,Subsequently |
R13541 | T17904 | T17901 | arg1Of | filtered,"," |
R13542 | T17904 | T17903 | arg2Of | filtered,were |
R13543 | T17904 | T17905 | arg1Of | filtered,through |
R13544 | T17908 | T17909 | arg1Of | µm,and |
R13545 | T17909 | T17907 | arg1Of | and,70 |
R13546 | T17910 | T17909 | arg2Of | 40,and |
R13547 | T17913 | T17905 | arg2Of | mesh,through |
R13548 | T17913 | T17906 | arg1Of | mesh,a |
R13549 | T17913 | T17908 | arg1Of | mesh,µm |
R13550 | T17913 | T17910 | arg1Of | mesh,40 |
R13551 | T17913 | T17911 | arg1Of | mesh,µm |
R13552 | T17913 | T17912 | arg1Of | mesh,nylon |
R13553 | T17916 | T17914 | arg2Of | preparation,For |
R13554 | T17916 | T17915 | arg1Of | preparation,the |
R13555 | T17916 | T17917 | arg1Of | preparation,of |
R13556 | T17918 | T17917 | arg2Of | BAL,of |
R13557 | T17920 | T17921 | arg1Of | trachea,were |
R13558 | T17920 | T17922 | arg2Of | trachea,canulated |
R13559 | T17922 | T17921 | arg2Of | canulated,were |
R13560 | T17922 | T17923 | arg1Of | canulated,and |
R13561 | T17923 | T17914 | arg1Of | and,For |
R13562 | T17923 | T17919 | arg1Of | and,"," |
R13563 | T17925 | T17924 | arg1Of | lumen,airway |
R13564 | T17925 | T17926 | arg1Of | lumen,was |
R13565 | T17925 | T17927 | arg2Of | lumen,flushed |
R13566 | T17927 | T17923 | arg2Of | flushed,and |
R13567 | T17927 | T17926 | arg2Of | flushed,was |
R13568 | T17927 | T17929 | arg1Of | flushed,times |
R13569 | T17927 | T17930 | arg1Of | flushed,with |
R13570 | T17929 | T17928 | arg1Of | times,4 |
R13571 | T17931 | T17930 | arg2Of | HBSS,with |
R13572 | T17931 | T17932 | arg1Of | HBSS,with |
R13573 | T17933 | T17934 | arg1Of | 1,mM |
R13574 | T17935 | T17932 | arg2Of | EDTA,with |
R13575 | T17935 | T17933 | arg1Of | EDTA,1 |
R13576 | T17937 | T17936 | arg1Of | iodide,Propidium |
R13577 | T17937 | T17938 | arg1Of | iodide,was |
R13578 | T17937 | T17939 | arg2Of | iodide,used |
R13579 | T17939 | T17938 | arg2Of | used,was |
R13580 | T17941 | T17939 | arg3Of | discriminate,used |
R13581 | T17941 | T17940 | arg1Of | discriminate,to |
R13582 | T17941 | T17942 | arg1Of | discriminate,between |
R13583 | T17943 | T17944 | arg1Of | live,and |
R13584 | T17945 | T17944 | arg2Of | dead,and |
R13585 | T17946 | T17942 | arg2Of | cells,between |
R13586 | T17946 | T17943 | arg1Of | cells,live |
R13587 | T17946 | T17945 | arg1Of | cells,dead |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17847 | 677-681 | Protein | denotes | CD16 |
T17846 | 649-653 | Protein | denotes | IFNγ |
T17845 | 628-632 | Protein | denotes | CD8α |
T17844 | 590-594 | Protein | denotes | Ly6G |
T17843 | 520-523 | Protein | denotes | CD3 |
T17842 | 475-485 | Protein | denotes | Granzyme B |
T17841 | 456-461 | Protein | denotes | CD62L |
T17840 | 40-59 | Protein | denotes | collagenase type IV |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18149 | 520-523 | http://www.uniprot.org/uniprot/P09693 | denotes | CD3 |
T18148 | 520-523 | http://www.uniprot.org/uniprot/P07766 | denotes | CD3 |
T18147 | 520-523 | http://www.uniprot.org/uniprot/P04234 | denotes | CD3 |
T18146 | 520-523 | http://www.uniprot.org/uniprot/P20963 | denotes | CD3 |
T18145 | 456-461 | http://www.uniprot.org/uniprot/P14151 | denotes | CD62L |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17825 | 227-234 | http://purl.obolibrary.org/obo/UBERON_0003126 | denotes | trachea |
T17824 | 0-5 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | Lungs |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17848 | 348-358 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17853 | 875-880 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T17852 | 611-614 | http://purl.obolibrary.org/obo/GO_0005680 | denotes | APC |
T17851 | 445-448 | http://purl.obolibrary.org/obo/GO_0005680 | denotes | APC |
T17850 | 348-358 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
T17849 | 348-358 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17831 | 811-881 | Sentence | denotes | Propidium iodide was used to discriminate between live and dead cells. |
T17830 | 313-810 | Sentence | denotes | Cells were stained with monoclonal antibodies directed against MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5.5 (N418), F4/80 APC (BM8), CD62L PE (MEL-14), Granzyme B FITC (NGZB) from eBiosciences and CD3 Molecular Complex Horizon v450 (17A2), Ly6C Horizon v450 (AL-21), Ly6G PE (1A8), CD11b APC-Cy7 (M1/70), CD8α PerCP (53-6.7), IFNγ Alexa 647 (XMG1.2) and CD16/32 (2.4G2) from BD Pharmingen. Samples were acquired on a LSRII Cytometer and analyzed using FACSDiva software (BD Biosciences). |
T17829 | 199-312 | Sentence | denotes | For the preparation of BAL, trachea were canulated and airway lumen was flushed 4 times with HBSS with 1 mM EDTA. |
T17828 | 125-198 | Sentence | denotes | Subsequently, samples were filtered through a 70 µm and 40 µm nylon mesh. |
T17827 | 0-124 | Sentence | denotes | Lungs were dissected and incubated with collagenase type IV (1 mg/ml; Sigma) and DNAse (100 U/ml; Roche) at 37°C for 30 min. |
T250 | 0-124 | Sentence | denotes | Lungs were dissected and incubated with collagenase type IV (1 mg/ml; Sigma) and DNAse (100 U/ml; Roche) at 37°C for 30 min. |
T251 | 125-198 | Sentence | denotes | Subsequently, samples were filtered through a 70 µm and 40 µm nylon mesh. |
T252 | 199-312 | Sentence | denotes | For the preparation of BAL, trachea were canulated and airway lumen was flushed 4 times with HBSS with 1 mM EDTA. |
T253 | 313-712 | Sentence | denotes | Cells were stained with monoclonal antibodies directed against MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5.5 (N418), F4/80 APC (BM8), CD62L PE (MEL-14), Granzyme B FITC (NGZB) from eBiosciences and CD3 Molecular Complex Horizon v450 (17A2), Ly6C Horizon v450 (AL-21), Ly6G PE (1A8), CD11b APC-Cy7 (M1/70), CD8α PerCP (53-6.7), IFNγ Alexa 647 (XMG1.2) and CD16/32 (2.4G2) from BD Pharmingen. |
T254 | 713-810 | Sentence | denotes | Samples were acquired on a LSRII Cytometer and analyzed using FACSDiva software (BD Biosciences). |
T255 | 811-881 | Sentence | denotes | Propidium iodide was used to discriminate between live and dead cells. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17869 | 677-681 | Protein | denotes | CD16 |
T17868 | 649-653 | Protein | denotes | IFNγ |
T17867 | 628-632 | Protein | denotes | CD8α |
T17866 | 590-594 | Protein | denotes | Ly6G |
T17865 | 520-523 | Protein | denotes | CD3 |
T17864 | 475-485 | Protein | denotes | Granzyme B |
T17863 | 456-461 | Protein | denotes | CD62L |
T17862 | 40-59 | Protein | denotes | collagenase type IV |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18199 | 677-681 | Protein | denotes | CD16 |
T18198 | 649-653 | Protein | denotes | IFNγ |
T18197 | 628-632 | Protein | denotes | CD8α |
T18196 | 590-594 | Protein | denotes | Ly6G |
T18195 | 520-523 | Protein | denotes | CD3 |
T18194 | 475-485 | Protein | denotes | Granzyme B |
T18193 | 456-461 | Protein | denotes | CD62L |
T18192 | 40-59 | Protein | denotes | collagenase type IV |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18157 | 677-681 | Protein | denotes | CD16 |
T18156 | 649-653 | Protein | denotes | IFNγ |
T18155 | 628-632 | Protein | denotes | CD8α |
T18154 | 590-594 | Protein | denotes | Ly6G |
T18153 | 520-523 | Protein | denotes | CD3 |
T18152 | 475-485 | Protein | denotes | Granzyme B |
T18151 | 456-461 | Protein | denotes | CD62L |
T18150 | 40-59 | Protein | denotes | collagenase type IV |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18162 | 590-594 | Protein | denotes | Ly6G |
T18161 | 520-523 | Protein | denotes | CD3 |
T18160 | 475-485 | Protein | denotes | Granzyme B |
T18159 | 456-461 | Protein | denotes | CD62L |
T18158 | 40-59 | Protein | denotes | collagenase type IV |
T18165 | 677-681 | Protein | denotes | CD16 |
T18164 | 649-653 | Protein | denotes | IFNγ |
T18163 | 628-632 | Protein | denotes | CD8α |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18225 | 439-448 | Protein | denotes | F4/80 APC |
T18224 | 61-75 | Protein | denotes | 1 mg/ml; Sigma |
T18223 | 811-827 | Entity | denotes | Propidium iodide |
T18222 | 376-428 | Protein | denotes | MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5 |
T18221 | 677-692 | Protein | denotes | CD16/32 (2.4G2) |
T18220 | 313-318 | Entity | denotes | Cells |
T18219 | 40-76 | Protein | denotes | collagenase type IV (1 mg/ml; Sigma) |
T18218 | 393-412 | Entity | denotes | FITC (M5/114.15.2), |
T18217 | 590-604 | Protein | denotes | Ly6G PE (1A8), |
T18216 | 222-234 | Protein | denotes | BAL, trachea |
T18215 | 475-497 | Entity | denotes | Granzyme B FITC (NGZB) |
T18214 | 337-358 | Protein | denotes | monoclonal antibodies |
T18213 | 590-594 | Protein | denotes | Ly6G |
T18212 | 81-86 | Protein | denotes | DNAse |
T18211 | 475-483 | Protein | denotes | Granzyme |
T18210 | 302-311 | Entity | denotes | 1 mM EDTA |
T18209 | 384-387 | Entity | denotes | I-A |
T18208 | 456-474 | Protein | denotes | CD62L PE (MEL-14), |
T18207 | 649-653 | Protein | denotes | IFNγ |
T18206 | 169-192 | Entity | denotes | a 70 µm and 40 µm nylon |
T18205 | 40-51 | Protein | denotes | collagenase |
T18204 | 628-632 | Protein | denotes | CD8α |
T18203 | 861-880 | Entity | denotes | live and dead cells |
T18202 | 520-523 | Protein | denotes | CD3 |
T18201 | 811-820 | Entity | denotes | Propidium |
T18200 | 456-461 | Protein | denotes | CD62L |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18144 | 880-881 | . | denotes | . |
T18143 | 875-880 | NNS | denotes | cells |
T18142 | 870-874 | JJ | denotes | dead |
T18141 | 866-869 | CC | denotes | and |
T18140 | 861-865 | JJ | denotes | live |
T18139 | 853-860 | IN | denotes | between |
T18138 | 840-852 | JJ | denotes | discriminate |
T18137 | 837-839 | TO | denotes | to |
T18136 | 832-836 | VBN | denotes | used |
T18135 | 828-831 | VBD | denotes | was |
T18134 | 821-827 | NN | denotes | iodide |
T18133 | 811-820 | NNP | denotes | Propidium |
T18132 | 809-810 | . | denotes | . |
T18131 | 808-809 | -RRB- | denotes | ) |
T18130 | 797-808 | NNPS | denotes | Biosciences |
T18129 | 794-796 | NNP | denotes | BD |
T18128 | 793-794 | -LRB- | denotes | ( |
T18127 | 784-792 | NN | denotes | software |
T18126 | 775-783 | NNP | denotes | FACSDiva |
T18125 | 769-774 | VBG | denotes | using |
T18124 | 760-768 | VBD | denotes | analyzed |
T18123 | 756-759 | CC | denotes | and |
T18122 | 746-755 | NNP | denotes | Cytometer |
T18121 | 740-745 | NNP | denotes | LSRII |
T18120 | 738-739 | DT | denotes | a |
T18119 | 735-737 | IN | denotes | on |
T18118 | 726-734 | VBN | denotes | acquired |
T18117 | 721-725 | VBD | denotes | were |
T18116 | 713-720 | NNS | denotes | Samples |
T18115 | 711-712 | . | denotes | . |
T18114 | 701-711 | NNP | denotes | Pharmingen |
T18113 | 698-700 | NNP | denotes | BD |
T18112 | 693-697 | IN | denotes | from |
T18111 | 691-692 | -RRB- | denotes | ) |
T18110 | 689-691 | NNP | denotes | G2 |
T18109 | 686-689 | CD | denotes | 2.4 |
T18108 | 685-686 | -LRB- | denotes | ( |
T18107 | 677-684 | NNP | denotes | CD16/32 |
T18106 | 673-676 | CC | denotes | and |
T18105 | 671-672 | -RRB- | denotes | ) |
T18104 | 669-671 | CD | denotes | .2 |
T18103 | 665-669 | NNP | denotes | XMG1 |
T18102 | 664-665 | -LRB- | denotes | ( |
T18101 | 660-663 | CD | denotes | 647 |
T18100 | 654-659 | NNP | denotes | Alexa |
T18099 | 649-653 | NNP | denotes | IFNγ |
T18098 | 647-648 | , | denotes | , |
T18097 | 646-647 | -RRB- | denotes | ) |
T18096 | 644-646 | CD | denotes | .7 |
T18095 | 640-644 | CD | denotes | 53-6 |
T18094 | 639-640 | -LRB- | denotes | ( |
T18093 | 633-638 | NNP | denotes | PerCP |
T18092 | 628-632 | NNP | denotes | CD8α |
T18091 | 626-627 | , | denotes | , |
T18090 | 625-626 | -RRB- | denotes | ) |
T18089 | 620-625 | NNP | denotes | M1/70 |
T18088 | 619-620 | -LRB- | denotes | ( |
T18087 | 611-618 | NNP | denotes | APC-Cy7 |
T18086 | 605-610 | NNP | denotes | CD11b |
T18085 | 603-604 | , | denotes | , |
T18084 | 602-603 | -RRB- | denotes | ) |
T18083 | 599-602 | NNP | denotes | 1A8 |
T18082 | 598-599 | -LRB- | denotes | ( |
T18081 | 595-597 | NNP | denotes | PE |
T18080 | 590-594 | NNP | denotes | Ly6G |
T18079 | 588-589 | , | denotes | , |
T18078 | 587-588 | -RRB- | denotes | ) |
T18077 | 582-587 | NN | denotes | AL-21 |
T18076 | 581-582 | -LRB- | denotes | ( |
T18075 | 576-580 | CD | denotes | v450 |
T18074 | 568-575 | NNP | denotes | Horizon |
T18073 | 563-567 | NNP | denotes | Ly6C |
T18072 | 561-562 | , | denotes | , |
T18071 | 560-561 | -RRB- | denotes | ) |
T18070 | 556-560 | NNP | denotes | 17A2 |
T18069 | 555-556 | -LRB- | denotes | ( |
T18068 | 550-554 | NN | denotes | v450 |
T18067 | 542-549 | NNP | denotes | Horizon |
T18066 | 534-541 | JJ | denotes | Complex |
T18065 | 524-533 | NNP | denotes | Molecular |
T18064 | 520-523 | NNP | denotes | CD3 |
T18063 | 516-519 | CC | denotes | and |
T18062 | 503-515 | NNPS | denotes | eBiosciences |
T18061 | 498-502 | IN | denotes | from |
T18060 | 496-497 | -RRB- | denotes | ) |
T18059 | 492-496 | NNP | denotes | NGZB |
T18058 | 491-492 | -LRB- | denotes | ( |
T18057 | 486-490 | NNP | denotes | FITC |
T18056 | 484-485 | NNP | denotes | B |
T18055 | 475-483 | NNP | denotes | Granzyme |
T18054 | 473-474 | , | denotes | , |
T18053 | 472-473 | -RRB- | denotes | ) |
T18052 | 466-472 | NNP | denotes | MEL-14 |
T18051 | 465-466 | -LRB- | denotes | ( |
T18050 | 462-464 | NNP | denotes | PE |
T18049 | 456-461 | NNP | denotes | CD62L |
T18048 | 454-455 | , | denotes | , |
T18047 | 453-454 | -RRB- | denotes | ) |
T18046 | 450-453 | NNP | denotes | BM8 |
T18045 | 449-450 | -LRB- | denotes | ( |
T18044 | 445-448 | NNP | denotes | APC |
T18043 | 439-444 | NNP | denotes | F4/80 |
T18042 | 437-438 | , | denotes | , |
T18041 | 436-437 | -RRB- | denotes | ) |
T18040 | 432-436 | NN | denotes | N418 |
T18039 | 431-432 | -LRB- | denotes | ( |
T18038 | 428-430 | CD | denotes | .5 |
T18037 | 419-428 | NNP | denotes | PerCP-Cy5 |
T18036 | 413-418 | NNP | denotes | CD11c |
T18035 | 411-412 | , | denotes | , |
T18034 | 410-411 | -RRB- | denotes | ) |
T18033 | 405-410 | CD | denotes | .15.2 |
T18032 | 399-405 | NNP | denotes | M5/114 |
T18031 | 398-399 | -LRB- | denotes | ( |
T18030 | 393-397 | NNP | denotes | FITC |
T18029 | 391-392 | -RRB- | denotes | ) |
T18028 | 384-391 | NNP | denotes | I-A/I-E |
T18027 | 383-384 | -LRB- | denotes | ( |
T17996 | 203-206 | DT | denotes | the |
T17995 | 199-202 | IN | denotes | For |
T17994 | 197-198 | . | denotes | . |
T17993 | 193-197 | NN | denotes | mesh |
T17992 | 187-192 | NN | denotes | nylon |
T17991 | 184-186 | NN | denotes | µm |
T17990 | 181-183 | CD | denotes | 40 |
T17989 | 177-180 | CC | denotes | and |
T17988 | 174-176 | NN | denotes | µm |
T17987 | 171-173 | CD | denotes | 70 |
T17986 | 169-170 | DT | denotes | a |
T17985 | 161-168 | IN | denotes | through |
T17984 | 152-160 | VBN | denotes | filtered |
T17983 | 147-151 | VBD | denotes | were |
T17982 | 139-146 | NNS | denotes | samples |
T17981 | 137-138 | , | denotes | , |
T17980 | 125-137 | RB | denotes | Subsequently |
T17979 | 123-124 | . | denotes | . |
T17978 | 120-123 | NN | denotes | min |
T17977 | 117-119 | CD | denotes | 30 |
T17976 | 113-116 | IN | denotes | for |
T17975 | 111-112 | NNP | denotes | C |
T17974 | 110-111 | CD | denotes | ° |
T17973 | 108-110 | CD | denotes | 37 |
T17972 | 105-107 | IN | denotes | at |
T17971 | 103-104 | -RRB- | denotes | ) |
T17970 | 98-103 | NNP | denotes | Roche |
T17969 | 96-97 | : | denotes | ; |
T17968 | 92-96 | NNP | denotes | U/ml |
T17967 | 88-91 | CD | denotes | 100 |
T17966 | 87-88 | -LRB- | denotes | ( |
T17965 | 81-86 | NNP | denotes | DNAse |
T17964 | 77-80 | CC | denotes | and |
T17963 | 75-76 | -RRB- | denotes | ) |
T17962 | 70-75 | NNP | denotes | Sigma |
T17961 | 68-69 | : | denotes | ; |
T17960 | 63-68 | NN | denotes | mg/ml |
T17959 | 61-62 | CD | denotes | 1 |
T17958 | 60-61 | -LRB- | denotes | ( |
T17957 | 57-59 | NNP | denotes | IV |
T17956 | 52-56 | NN | denotes | type |
T17955 | 40-51 | NN | denotes | collagenase |
T17954 | 35-39 | IN | denotes | with |
T17953 | 25-34 | VBN | denotes | incubated |
T17952 | 21-24 | CC | denotes | and |
T17951 | 11-20 | VBN | denotes | dissected |
T17950 | 6-10 | VBD | denotes | were |
T18024 | 359-367 | VBN | denotes | directed |
T18023 | 348-358 | NNS | denotes | antibodies |
T18022 | 337-347 | JJ | denotes | monoclonal |
T18021 | 332-336 | IN | denotes | with |
T18020 | 324-331 | VBN | denotes | stained |
T18019 | 319-323 | VBD | denotes | were |
T17949 | 0-5 | NNS | denotes | Lungs |
T18026 | 376-382 | NNP | denotes | MHC-II |
T18025 | 368-375 | IN | denotes | against |
T18018 | 313-318 | NNS | denotes | Cells |
T18017 | 311-312 | . | denotes | . |
T18016 | 307-311 | NNP | denotes | EDTA |
T18015 | 304-306 | NNP | denotes | mM |
T18014 | 302-303 | CD | denotes | 1 |
T18013 | 297-301 | IN | denotes | with |
T18012 | 292-296 | NNP | denotes | HBSS |
T18011 | 287-291 | IN | denotes | with |
T18010 | 281-286 | NNS | denotes | times |
T18009 | 279-280 | CD | denotes | 4 |
T18008 | 271-278 | VBN | denotes | flushed |
T18007 | 267-270 | VBD | denotes | was |
T18006 | 261-266 | NNS | denotes | lumen |
T18005 | 254-260 | NN | denotes | airway |
T18004 | 250-253 | CC | denotes | and |
T18003 | 240-249 | VBN | denotes | canulated |
T18002 | 235-239 | VBD | denotes | were |
T18001 | 227-234 | NN | denotes | trachea |
T18000 | 225-226 | , | denotes | , |
T17999 | 222-225 | NNP | denotes | BAL |
T17998 | 219-221 | IN | denotes | of |
T17997 | 207-218 | NN | denotes | preparation |
R13590 | T17949 | T17951 | nsubjpass | Lungs,dissected |
R13591 | T17950 | T17951 | auxpass | were,dissected |
R13592 | T17951 | T17951 | ROOT | dissected,dissected |
R13593 | T17952 | T17951 | cc | and,dissected |
R13594 | T17953 | T17951 | conj | incubated,dissected |
R13595 | T17954 | T17953 | prep | with,incubated |
R13596 | T17955 | T17956 | compound | collagenase,type |
R13597 | T17956 | T17957 | compound | type,IV |
R13598 | T17957 | T17954 | pobj | IV,with |
R13599 | T17958 | T17960 | punct | (,mg/ml |
R13600 | T17959 | T17960 | nummod | 1,mg/ml |
R13601 | T17960 | T17957 | appos | mg/ml,IV |
R13602 | T17961 | T17962 | punct | ;,Sigma |
R13603 | T17962 | T17962 | ROOT | Sigma,Sigma |
R13604 | T17963 | T17962 | punct | ),Sigma |
R13605 | T17964 | T17962 | cc | and,Sigma |
R13606 | T17965 | T17962 | conj | DNAse,Sigma |
R13607 | T17966 | T17968 | punct | (,U/ml |
R13608 | T17967 | T17968 | nummod | 100,U/ml |
R13609 | T17968 | T17962 | conj | U/ml,Sigma |
R13610 | T17969 | T17968 | punct | ;,U/ml |
R13611 | T17970 | T17968 | conj | Roche,U/ml |
R13612 | T17971 | T17968 | punct | ),U/ml |
R13613 | T17972 | T17962 | prep | at,Sigma |
R13614 | T17973 | T17974 | nummod | 37,° |
R13615 | T17974 | T17972 | pobj | °,at |
R13616 | T17975 | T17962 | conj | C,Sigma |
R13617 | T17976 | T17962 | prep | for,Sigma |
R13618 | T17977 | T17978 | nummod | 30,min |
R13619 | T17978 | T17976 | pobj | min,for |
R13620 | T17979 | T17951 | punct | .,dissected |
R13621 | T17980 | T17984 | advmod | Subsequently,filtered |
R13622 | T17981 | T17984 | punct | ",",filtered |
R13623 | T17982 | T17984 | nsubjpass | samples,filtered |
R13624 | T17983 | T17984 | auxpass | were,filtered |
R13625 | T17984 | T17984 | ROOT | filtered,filtered |
R13626 | T17985 | T17984 | prep | through,filtered |
R13627 | T17986 | T17988 | det | a,µm |
R13628 | T17987 | T17988 | nummod | 70,µm |
R13629 | T17988 | T17985 | pobj | µm,through |
R13630 | T17989 | T17988 | cc | and,µm |
R13631 | T17990 | T17991 | nummod | 40,µm |
R13632 | T17991 | T17993 | compound | µm,mesh |
R13633 | T17992 | T17993 | compound | nylon,mesh |
R13634 | T17993 | T17988 | conj | mesh,µm |
R13635 | T17994 | T17984 | punct | .,filtered |
R13636 | T17995 | T18003 | prep | For,canulated |
R13637 | T17996 | T17997 | det | the,preparation |
R13638 | T17997 | T17995 | pobj | preparation,For |
R13639 | T17998 | T17997 | prep | of,preparation |
R13640 | T17999 | T17998 | pobj | BAL,of |
R13641 | T18000 | T18003 | punct | ",",canulated |
R13642 | T18001 | T18003 | nsubjpass | trachea,canulated |
R13643 | T18002 | T18003 | auxpass | were,canulated |
R13644 | T18003 | T18003 | ROOT | canulated,canulated |
R13645 | T18004 | T18003 | cc | and,canulated |
R13646 | T18005 | T18006 | compound | airway,lumen |
R13647 | T18006 | T18008 | nsubjpass | lumen,flushed |
R13648 | T18007 | T18008 | auxpass | was,flushed |
R13649 | T18008 | T18003 | conj | flushed,canulated |
R13650 | T18009 | T18010 | nummod | 4,times |
R13651 | T18010 | T18008 | npadvmod | times,flushed |
R13652 | T18011 | T18008 | prep | with,flushed |
R13653 | T18012 | T18011 | pobj | HBSS,with |
R13654 | T18013 | T18008 | prep | with,flushed |
R13655 | T18014 | T18016 | nummod | 1,EDTA |
R13656 | T18015 | T18016 | compound | mM,EDTA |
R13657 | T18016 | T18013 | pobj | EDTA,with |
R13658 | T18017 | T18008 | punct | .,flushed |
R13659 | T18018 | T18020 | nsubjpass | Cells,stained |
R13660 | T18019 | T18020 | auxpass | were,stained |
R13661 | T18020 | T18020 | ROOT | stained,stained |
R13662 | T18021 | T18020 | prep | with,stained |
R13663 | T18022 | T18023 | amod | monoclonal,antibodies |
R13664 | T18023 | T18021 | pobj | antibodies,with |
R13665 | T18024 | T18020 | conj | directed,stained |
R13666 | T18025 | T18024 | prep | against,directed |
R13667 | T18026 | T18025 | pobj | MHC-II,against |
R13668 | T18027 | T18026 | punct | (,MHC-II |
R13669 | T18028 | T18026 | appos | I-A/I-E,MHC-II |
R13670 | T18029 | T18026 | punct | ),MHC-II |
R13671 | T18030 | T18026 | conj | FITC,MHC-II |
R13672 | T18031 | T18030 | punct | (,FITC |
R13673 | T18032 | T18030 | appos | M5/114,FITC |
R13674 | T18033 | T18032 | nummod | .15.2,M5/114 |
R13675 | T18034 | T18030 | punct | ),FITC |
R13676 | T18035 | T18024 | punct | ",",directed |
R13677 | T18036 | T18037 | compound | CD11c,PerCP-Cy5 |
R13678 | T18037 | T18038 | compound | PerCP-Cy5,.5 |
R13679 | T18038 | T18040 | nummod | .5,N418 |
R13680 | T18039 | T18040 | punct | (,N418 |
R13681 | T18040 | T18020 | npadvmod | N418,stained |
R13682 | T18041 | T18040 | punct | ),N418 |
R13683 | T18042 | T18040 | punct | ",",N418 |
R13684 | T18043 | T18044 | compound | F4/80,APC |
R13685 | T18044 | T18040 | appos | APC,N418 |
R13686 | T18045 | T18046 | punct | (,BM8 |
R13687 | T18046 | T18044 | appos | BM8,APC |
R13688 | T18047 | T18046 | punct | ),BM8 |
R13689 | T18048 | T18044 | punct | ",",APC |
R13690 | T18049 | T18050 | compound | CD62L,PE |
R13691 | T18050 | T18044 | appos | PE,APC |
R13692 | T18051 | T18052 | punct | (,MEL-14 |
R13693 | T18052 | T18050 | appos | MEL-14,PE |
R13694 | T18053 | T18050 | punct | ),PE |
R13695 | T18054 | T18044 | punct | ",",APC |
R13696 | T18055 | T18057 | compound | Granzyme,FITC |
R13697 | T18056 | T18057 | compound | B,FITC |
R13698 | T18057 | T18044 | appos | FITC,APC |
R13699 | T18058 | T18059 | punct | (,NGZB |
R13700 | T18059 | T18057 | appos | NGZB,FITC |
R13701 | T18060 | T18057 | punct | ),FITC |
R13702 | T18061 | T18057 | prep | from,FITC |
R13703 | T18062 | T18061 | pobj | eBiosciences,from |
R13704 | T18063 | T18062 | cc | and,eBiosciences |
R13705 | T18064 | T18065 | compound | CD3,Molecular |
R13706 | T18065 | T18062 | conj | Molecular,eBiosciences |
R13707 | T18066 | T18068 | amod | Complex,v450 |
R13708 | T18067 | T18068 | compound | Horizon,v450 |
R13709 | T18068 | T18065 | appos | v450,Molecular |
R13710 | T18069 | T18070 | punct | (,17A2 |
R13711 | T18070 | T18068 | appos | 17A2,v450 |
R13712 | T18071 | T18070 | punct | ),17A2 |
R13713 | T18072 | T18065 | punct | ",",Molecular |
R13714 | T18073 | T18074 | compound | Ly6C,Horizon |
R13715 | T18074 | T18065 | appos | Horizon,Molecular |
R13716 | T18075 | T18074 | nummod | v450,Horizon |
R13717 | T18076 | T18077 | punct | (,AL-21 |
R13718 | T18077 | T18074 | appos | AL-21,Horizon |
R13719 | T18078 | T18077 | punct | ),AL-21 |
R13720 | T18079 | T18074 | punct | ",",Horizon |
R13721 | T18080 | T18081 | compound | Ly6G,PE |
R13722 | T18081 | T18065 | appos | PE,Molecular |
R13723 | T18082 | T18083 | punct | (,1A8 |
R13724 | T18083 | T18081 | appos | 1A8,PE |
R13725 | T18084 | T18081 | punct | ),PE |
R13726 | T18085 | T18065 | punct | ",",Molecular |
R13727 | T18086 | T18087 | compound | CD11b,APC-Cy7 |
R13728 | T18087 | T18065 | appos | APC-Cy7,Molecular |
R13729 | T18088 | T18089 | punct | (,M1/70 |
R13730 | T18089 | T18087 | appos | M1/70,APC-Cy7 |
R13731 | T18090 | T18087 | punct | ),APC-Cy7 |
R13732 | T18091 | T18065 | punct | ",",Molecular |
R13733 | T18092 | T18093 | compound | CD8α,PerCP |
R13734 | T18093 | T18065 | appos | PerCP,Molecular |
R13735 | T18094 | T18095 | punct | (,53-6 |
R13736 | T18095 | T18096 | nummod | 53-6,.7 |
R13737 | T18096 | T18093 | appos | .7,PerCP |
R13738 | T18097 | T18093 | punct | ),PerCP |
R13739 | T18098 | T18065 | punct | ",",Molecular |
R13740 | T18099 | T18100 | compound | IFNγ,Alexa |
R13741 | T18100 | T18065 | appos | Alexa,Molecular |
R13742 | T18101 | T18100 | nummod | 647,Alexa |
R13743 | T18102 | T18103 | punct | (,XMG1 |
R13744 | T18103 | T18100 | appos | XMG1,Alexa |
R13745 | T18104 | T18103 | nummod | .2,XMG1 |
R13746 | T18105 | T18103 | punct | ),XMG1 |
R13747 | T18106 | T18100 | cc | and,Alexa |
R13748 | T18107 | T18100 | conj | CD16/32,Alexa |
R13749 | T18108 | T18110 | punct | (,G2 |
R13750 | T18109 | T18110 | nummod | 2.4,G2 |
R13751 | T18110 | T18107 | appos | G2,CD16/32 |
R13752 | T18111 | T18110 | punct | ),G2 |
R13753 | T18112 | T18110 | prep | from,G2 |
R13754 | T18113 | T18114 | compound | BD,Pharmingen |
R13755 | T18114 | T18112 | pobj | Pharmingen,from |
R13756 | T18115 | T18040 | punct | .,N418 |
R13757 | T18116 | T18118 | nsubjpass | Samples,acquired |
R13758 | T18117 | T18118 | auxpass | were,acquired |
R13759 | T18118 | T18118 | ROOT | acquired,acquired |
R13760 | T18119 | T18118 | prep | on,acquired |
R13761 | T18120 | T18122 | det | a,Cytometer |
R13762 | T18121 | T18122 | compound | LSRII,Cytometer |
R13763 | T18122 | T18119 | pobj | Cytometer,on |
R13764 | T18123 | T18118 | cc | and,acquired |
R13765 | T18124 | T18118 | conj | analyzed,acquired |
R13766 | T18125 | T18124 | xcomp | using,analyzed |
R13767 | T18126 | T18127 | compound | FACSDiva,software |
R13768 | T18127 | T18125 | dobj | software,using |
R13769 | T18128 | T18127 | punct | (,software |
R13770 | T18129 | T18130 | compound | BD,Biosciences |
R13771 | T18130 | T18127 | appos | Biosciences,software |
R13772 | T18131 | T18127 | punct | ),software |
R13773 | T18132 | T18118 | punct | .,acquired |
R13774 | T18133 | T18134 | compound | Propidium,iodide |
R13775 | T18134 | T18136 | nsubjpass | iodide,used |
R13776 | T18135 | T18136 | auxpass | was,used |
R13777 | T18136 | T18136 | ROOT | used,used |
R13778 | T18137 | T18138 | aux | to,discriminate |
R13779 | T18138 | T18136 | xcomp | discriminate,used |
R13780 | T18139 | T18138 | prep | between,discriminate |
R13781 | T18140 | T18143 | amod | live,cells |
R13782 | T18141 | T18140 | cc | and,live |
R13783 | T18142 | T18140 | conj | dead,live |
R13784 | T18143 | T18139 | pobj | cells,between |
R13785 | T18144 | T18136 | punct | .,used |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18182 | 698-711 | Protein | denotes | BD Pharmingen |
T18181 | 628-663 | Protein | denotes | CD8α PerCP (53-6.7), IFNγ Alexa 647 |
T18180 | 605-610 | Protein | denotes | CD11b |
T18179 | 599-602 | Protein | denotes | 1A8 |
T18178 | 590-597 | Protein | denotes | Ly6G PE |
T18177 | 563-580 | Protein | denotes | Ly6C Horizon v450 |
T18176 | 456-461 | Protein | denotes | CD62L |
T18175 | 413-418 | Protein | denotes | CD11c |
T18174 | 40-51 | Protein | denotes | collagenase |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17807 | 677-681 | Protein | denotes | CD16 |
T17806 | 649-653 | Protein | denotes | IFNγ |
T17805 | 628-632 | Protein | denotes | CD8α |
T17804 | 590-594 | Protein | denotes | Ly6G |
T17803 | 520-523 | Protein | denotes | CD3 |
T17802 | 475-485 | Protein | denotes | Granzyme B |
T17801 | 456-461 | Protein | denotes | CD62L |
T17800 | 40-59 | Protein | denotes | collagenase type IV |