> top > docs > PMC:3291650 > spans > 38846-39727 > annotations

PMC:3291650 / 38846-39727 JSONTXT

Annnotations TAB JSON ListView MergeView

test3

Id Subject Object Predicate Lexical cue
T17823 677-681 Protein denotes CD16
T17822 649-653 Protein denotes IFNγ
T17821 628-632 Protein denotes CD8α
T17820 590-594 Protein denotes Ly6G
T17819 520-523 Protein denotes CD3
T17818 475-485 Protein denotes Granzyme B
T17817 456-461 Protein denotes CD62L
T17816 40-59 Protein denotes collagenase type IV
T17815 677-681 Protein denotes CD16
T17814 649-653 Protein denotes IFNγ
T17813 628-632 Protein denotes CD8α
T17812 590-594 Protein denotes Ly6G
T17811 520-523 Protein denotes CD3
T17810 475-485 Protein denotes Granzyme B
T17809 456-461 Protein denotes CD62L
T17808 40-59 Protein denotes collagenase type IV

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17943 861-865 JJ denotes live
T17942 853-860 IN denotes between
T17941 840-852 VB denotes discriminate
T17940 837-839 TO denotes to
T17939 832-836 VB denotes used
T17938 828-831 VB denotes was
T17937 821-827 NN denotes iodide
T17936 811-820 NN denotes Propidium
T17935 307-311 NN denotes EDTA
T17934 304-306 NN denotes mM
T17933 302-303 CD denotes 1
T17932 297-301 IN denotes with
T17931 292-296 NN denotes HBSS
T17930 287-291 IN denotes with
T17929 281-286 NN denotes times
T17928 279-280 CD denotes 4
T17927 271-278 VB denotes flushed
T17926 267-270 VB denotes was
T17925 261-266 NN denotes lumen
T17924 254-260 NN denotes airway
T17923 250-253 CC denotes and
T17922 240-249 VB denotes canulated
T17921 235-239 VB denotes were
T17920 227-234 NN denotes trachea
T17919 225-226 -COMMA- denotes ,
T17918 222-225 NN denotes BAL
T17917 219-221 IN denotes of
T17916 207-218 NN denotes preparation
T17915 203-206 DT denotes the
T17914 199-202 IN denotes For
T17913 193-197 NN denotes mesh
T17912 187-192 NN denotes nylon
T17911 184-186 NN denotes µm
T17910 181-183 CD denotes 40
T17909 177-180 CC denotes and
T17908 174-176 NN denotes µm
T17907 171-173 CD denotes 70
T17906 169-170 DT denotes a
T17905 161-168 IN denotes through
T17904 152-160 VB denotes filtered
T17903 147-151 VB denotes were
T17902 139-146 NN denotes samples
T17901 137-138 -COMMA- denotes ,
T17900 125-137 RB denotes Subsequently
T17899 120-123 NN denotes min
T17898 117-119 CD denotes 30
T17897 113-116 IN denotes for
T17896 108-112 NN denotes 37°C
T17895 105-107 IN denotes at
T17894 103-104 -RRB- denotes )
T17893 98-103 NNP denotes Roche
T17892 96-97 -COLON- denotes ;
T17891 92-96 NN denotes U/ml
T17890 88-91 CD denotes 100
T17889 87-88 -LRB- denotes (
T17888 81-86 NN denotes DNAse
T17887 77-80 CC denotes and
T17886 75-76 -RRB- denotes )
T17885 70-75 NNP denotes Sigma
T17884 68-69 -COLON- denotes ;
T17883 63-68 NN denotes mg/ml
T17882 61-62 CD denotes 1
T17881 60-61 -LRB- denotes (
T17880 57-59 CD denotes IV
T17879 52-56 NN denotes type
T17878 40-51 NN denotes collagenase
T17877 35-39 IN denotes with
T17876 25-34 VB denotes incubated
T17875 21-24 CC denotes and
T17874 11-20 VB denotes dissected
T17873 6-10 VB denotes were
T17872 0-5 NN denotes Lungs
T17946 875-880 NN denotes cells
T17945 870-874 JJ denotes dead
T17944 866-869 CC denotes and
R13509 T17872 T17873 arg1Of Lungs,were
R13510 T17872 T17874 arg2Of Lungs,dissected
R13511 T17872 T17876 arg2Of Lungs,incubated
R13512 T17874 T17875 arg1Of dissected,and
R13513 T17875 T17873 arg2Of and,were
R13514 T17876 T17875 arg2Of incubated,and
R13515 T17876 T17877 arg1Of incubated,with
R13516 T17876 T17897 arg1Of incubated,for
R13517 T17879 T17878 arg1Of type,collagenase
R13518 T17879 T17880 arg1Of type,IV
R13519 T17879 T17881 arg1Of type,(
R13520 T17879 T17887 arg1Of type,and
R13521 T17883 T17881 arg2Of mg/ml,(
R13522 T17883 T17882 arg1Of mg/ml,1
R13523 T17883 T17884 arg1Of mg/ml,;
R13524 T17885 T17884 arg2Of Sigma,;
R13525 T17886 T17881 arg3Of ),(
R13526 T17887 T17877 arg2Of and,with
R13527 T17888 T17887 arg2Of DNAse,and
R13528 T17888 T17889 arg1Of DNAse,(
R13529 T17888 T17895 arg1Of DNAse,at
R13530 T17891 T17889 arg2Of U/ml,(
R13531 T17891 T17890 arg1Of U/ml,100
R13532 T17891 T17892 arg1Of U/ml,;
R13533 T17893 T17892 arg2Of Roche,;
R13534 T17894 T17889 arg3Of ),(
R13535 T17896 T17895 arg2Of 37°C,at
R13536 T17899 T17897 arg2Of min,for
R13537 T17899 T17898 arg1Of min,30
R13538 T17902 T17903 arg1Of samples,were
R13539 T17902 T17904 arg2Of samples,filtered
R13540 T17904 T17900 arg1Of filtered,Subsequently
R13541 T17904 T17901 arg1Of filtered,","
R13542 T17904 T17903 arg2Of filtered,were
R13543 T17904 T17905 arg1Of filtered,through
R13544 T17908 T17909 arg1Of µm,and
R13545 T17909 T17907 arg1Of and,70
R13546 T17910 T17909 arg2Of 40,and
R13547 T17913 T17905 arg2Of mesh,through
R13548 T17913 T17906 arg1Of mesh,a
R13549 T17913 T17908 arg1Of mesh,µm
R13550 T17913 T17910 arg1Of mesh,40
R13551 T17913 T17911 arg1Of mesh,µm
R13552 T17913 T17912 arg1Of mesh,nylon
R13553 T17916 T17914 arg2Of preparation,For
R13554 T17916 T17915 arg1Of preparation,the
R13555 T17916 T17917 arg1Of preparation,of
R13556 T17918 T17917 arg2Of BAL,of
R13557 T17920 T17921 arg1Of trachea,were
R13558 T17920 T17922 arg2Of trachea,canulated
R13559 T17922 T17921 arg2Of canulated,were
R13560 T17922 T17923 arg1Of canulated,and
R13561 T17923 T17914 arg1Of and,For
R13562 T17923 T17919 arg1Of and,","
R13563 T17925 T17924 arg1Of lumen,airway
R13564 T17925 T17926 arg1Of lumen,was
R13565 T17925 T17927 arg2Of lumen,flushed
R13566 T17927 T17923 arg2Of flushed,and
R13567 T17927 T17926 arg2Of flushed,was
R13568 T17927 T17929 arg1Of flushed,times
R13569 T17927 T17930 arg1Of flushed,with
R13570 T17929 T17928 arg1Of times,4
R13571 T17931 T17930 arg2Of HBSS,with
R13572 T17931 T17932 arg1Of HBSS,with
R13573 T17933 T17934 arg1Of 1,mM
R13574 T17935 T17932 arg2Of EDTA,with
R13575 T17935 T17933 arg1Of EDTA,1
R13576 T17937 T17936 arg1Of iodide,Propidium
R13577 T17937 T17938 arg1Of iodide,was
R13578 T17937 T17939 arg2Of iodide,used
R13579 T17939 T17938 arg2Of used,was
R13580 T17941 T17939 arg3Of discriminate,used
R13581 T17941 T17940 arg1Of discriminate,to
R13582 T17941 T17942 arg1Of discriminate,between
R13583 T17943 T17944 arg1Of live,and
R13584 T17945 T17944 arg2Of dead,and
R13585 T17946 T17942 arg2Of cells,between
R13586 T17946 T17943 arg1Of cells,live
R13587 T17946 T17945 arg1Of cells,dead

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17847 677-681 Protein denotes CD16
T17846 649-653 Protein denotes IFNγ
T17845 628-632 Protein denotes CD8α
T17844 590-594 Protein denotes Ly6G
T17843 520-523 Protein denotes CD3
T17842 475-485 Protein denotes Granzyme B
T17841 456-461 Protein denotes CD62L
T17840 40-59 Protein denotes collagenase type IV

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18149 520-523 http://www.uniprot.org/uniprot/P09693 denotes CD3
T18148 520-523 http://www.uniprot.org/uniprot/P07766 denotes CD3
T18147 520-523 http://www.uniprot.org/uniprot/P04234 denotes CD3
T18146 520-523 http://www.uniprot.org/uniprot/P20963 denotes CD3
T18145 456-461 http://www.uniprot.org/uniprot/P14151 denotes CD62L

UBERON-AE

Id Subject Object Predicate Lexical cue
T17825 227-234 http://purl.obolibrary.org/obo/UBERON_0003126 denotes trachea
T17824 0-5 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lungs

GO-MF

Id Subject Object Predicate Lexical cue
T17848 348-358 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T17853 875-880 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T17852 611-614 http://purl.obolibrary.org/obo/GO_0005680 denotes APC
T17851 445-448 http://purl.obolibrary.org/obo/GO_0005680 denotes APC
T17850 348-358 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T17849 348-358 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T17831 811-881 Sentence denotes Propidium iodide was used to discriminate between live and dead cells.
T17830 313-810 Sentence denotes Cells were stained with monoclonal antibodies directed against MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5.5 (N418), F4/80 APC (BM8), CD62L PE (MEL-14), Granzyme B FITC (NGZB) from eBiosciences and CD3 Molecular Complex Horizon v450 (17A2), Ly6C Horizon v450 (AL-21), Ly6G PE (1A8), CD11b APC-Cy7 (M1/70), CD8α PerCP (53-6.7), IFNγ Alexa 647 (XMG1.2) and CD16/32 (2.4G2) from BD Pharmingen. Samples were acquired on a LSRII Cytometer and analyzed using FACSDiva software (BD Biosciences).
T17829 199-312 Sentence denotes For the preparation of BAL, trachea were canulated and airway lumen was flushed 4 times with HBSS with 1 mM EDTA.
T17828 125-198 Sentence denotes Subsequently, samples were filtered through a 70 µm and 40 µm nylon mesh.
T17827 0-124 Sentence denotes Lungs were dissected and incubated with collagenase type IV (1 mg/ml; Sigma) and DNAse (100 U/ml; Roche) at 37°C for 30 min.
T250 0-124 Sentence denotes Lungs were dissected and incubated with collagenase type IV (1 mg/ml; Sigma) and DNAse (100 U/ml; Roche) at 37°C for 30 min.
T251 125-198 Sentence denotes Subsequently, samples were filtered through a 70 µm and 40 µm nylon mesh.
T252 199-312 Sentence denotes For the preparation of BAL, trachea were canulated and airway lumen was flushed 4 times with HBSS with 1 mM EDTA.
T253 313-712 Sentence denotes Cells were stained with monoclonal antibodies directed against MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5.5 (N418), F4/80 APC (BM8), CD62L PE (MEL-14), Granzyme B FITC (NGZB) from eBiosciences and CD3 Molecular Complex Horizon v450 (17A2), Ly6C Horizon v450 (AL-21), Ly6G PE (1A8), CD11b APC-Cy7 (M1/70), CD8α PerCP (53-6.7), IFNγ Alexa 647 (XMG1.2) and CD16/32 (2.4G2) from BD Pharmingen.
T254 713-810 Sentence denotes Samples were acquired on a LSRII Cytometer and analyzed using FACSDiva software (BD Biosciences).
T255 811-881 Sentence denotes Propidium iodide was used to discriminate between live and dead cells.

simple1

Id Subject Object Predicate Lexical cue
T17869 677-681 Protein denotes CD16
T17868 649-653 Protein denotes IFNγ
T17867 628-632 Protein denotes CD8α
T17866 590-594 Protein denotes Ly6G
T17865 520-523 Protein denotes CD3
T17864 475-485 Protein denotes Granzyme B
T17863 456-461 Protein denotes CD62L
T17862 40-59 Protein denotes collagenase type IV

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T18199 677-681 Protein denotes CD16
T18198 649-653 Protein denotes IFNγ
T18197 628-632 Protein denotes CD8α
T18196 590-594 Protein denotes Ly6G
T18195 520-523 Protein denotes CD3
T18194 475-485 Protein denotes Granzyme B
T18193 456-461 Protein denotes CD62L
T18192 40-59 Protein denotes collagenase type IV

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T18157 677-681 Protein denotes CD16
T18156 649-653 Protein denotes IFNγ
T18155 628-632 Protein denotes CD8α
T18154 590-594 Protein denotes Ly6G
T18153 520-523 Protein denotes CD3
T18152 475-485 Protein denotes Granzyme B
T18151 456-461 Protein denotes CD62L
T18150 40-59 Protein denotes collagenase type IV

DLUT931

Id Subject Object Predicate Lexical cue
T18162 590-594 Protein denotes Ly6G
T18161 520-523 Protein denotes CD3
T18160 475-485 Protein denotes Granzyme B
T18159 456-461 Protein denotes CD62L
T18158 40-59 Protein denotes collagenase type IV
T18165 677-681 Protein denotes CD16
T18164 649-653 Protein denotes IFNγ
T18163 628-632 Protein denotes CD8α

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18225 439-448 Protein denotes F4/80 APC
T18224 61-75 Protein denotes 1 mg/ml; Sigma
T18223 811-827 Entity denotes Propidium iodide
T18222 376-428 Protein denotes MHC-II (I-A/I-E) FITC (M5/114.15.2), CD11c PerCP-Cy5
T18221 677-692 Protein denotes CD16/32 (2.4G2)
T18220 313-318 Entity denotes Cells
T18219 40-76 Protein denotes collagenase type IV (1 mg/ml; Sigma)
T18218 393-412 Entity denotes FITC (M5/114.15.2),
T18217 590-604 Protein denotes Ly6G PE (1A8),
T18216 222-234 Protein denotes BAL, trachea
T18215 475-497 Entity denotes Granzyme B FITC (NGZB)
T18214 337-358 Protein denotes monoclonal antibodies
T18213 590-594 Protein denotes Ly6G
T18212 81-86 Protein denotes DNAse
T18211 475-483 Protein denotes Granzyme
T18210 302-311 Entity denotes 1 mM EDTA
T18209 384-387 Entity denotes I-A
T18208 456-474 Protein denotes CD62L PE (MEL-14),
T18207 649-653 Protein denotes IFNγ
T18206 169-192 Entity denotes a 70 µm and 40 µm nylon
T18205 40-51 Protein denotes collagenase
T18204 628-632 Protein denotes CD8α
T18203 861-880 Entity denotes live and dead cells
T18202 520-523 Protein denotes CD3
T18201 811-820 Entity denotes Propidium
T18200 456-461 Protein denotes CD62L

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18144 880-881 . denotes .
T18143 875-880 NNS denotes cells
T18142 870-874 JJ denotes dead
T18141 866-869 CC denotes and
T18140 861-865 JJ denotes live
T18139 853-860 IN denotes between
T18138 840-852 JJ denotes discriminate
T18137 837-839 TO denotes to
T18136 832-836 VBN denotes used
T18135 828-831 VBD denotes was
T18134 821-827 NN denotes iodide
T18133 811-820 NNP denotes Propidium
T18132 809-810 . denotes .
T18131 808-809 -RRB- denotes )
T18130 797-808 NNPS denotes Biosciences
T18129 794-796 NNP denotes BD
T18128 793-794 -LRB- denotes (
T18127 784-792 NN denotes software
T18126 775-783 NNP denotes FACSDiva
T18125 769-774 VBG denotes using
T18124 760-768 VBD denotes analyzed
T18123 756-759 CC denotes and
T18122 746-755 NNP denotes Cytometer
T18121 740-745 NNP denotes LSRII
T18120 738-739 DT denotes a
T18119 735-737 IN denotes on
T18118 726-734 VBN denotes acquired
T18117 721-725 VBD denotes were
T18116 713-720 NNS denotes Samples
T18115 711-712 . denotes .
T18114 701-711 NNP denotes Pharmingen
T18113 698-700 NNP denotes BD
T18112 693-697 IN denotes from
T18111 691-692 -RRB- denotes )
T18110 689-691 NNP denotes G2
T18109 686-689 CD denotes 2.4
T18108 685-686 -LRB- denotes (
T18107 677-684 NNP denotes CD16/32
T18106 673-676 CC denotes and
T18105 671-672 -RRB- denotes )
T18104 669-671 CD denotes .2
T18103 665-669 NNP denotes XMG1
T18102 664-665 -LRB- denotes (
T18101 660-663 CD denotes 647
T18100 654-659 NNP denotes Alexa
T18099 649-653 NNP denotes IFNγ
T18098 647-648 , denotes ,
T18097 646-647 -RRB- denotes )
T18096 644-646 CD denotes .7
T18095 640-644 CD denotes 53-6
T18094 639-640 -LRB- denotes (
T18093 633-638 NNP denotes PerCP
T18092 628-632 NNP denotes CD8α
T18091 626-627 , denotes ,
T18090 625-626 -RRB- denotes )
T18089 620-625 NNP denotes M1/70
T18088 619-620 -LRB- denotes (
T18087 611-618 NNP denotes APC-Cy7
T18086 605-610 NNP denotes CD11b
T18085 603-604 , denotes ,
T18084 602-603 -RRB- denotes )
T18083 599-602 NNP denotes 1A8
T18082 598-599 -LRB- denotes (
T18081 595-597 NNP denotes PE
T18080 590-594 NNP denotes Ly6G
T18079 588-589 , denotes ,
T18078 587-588 -RRB- denotes )
T18077 582-587 NN denotes AL-21
T18076 581-582 -LRB- denotes (
T18075 576-580 CD denotes v450
T18074 568-575 NNP denotes Horizon
T18073 563-567 NNP denotes Ly6C
T18072 561-562 , denotes ,
T18071 560-561 -RRB- denotes )
T18070 556-560 NNP denotes 17A2
T18069 555-556 -LRB- denotes (
T18068 550-554 NN denotes v450
T18067 542-549 NNP denotes Horizon
T18066 534-541 JJ denotes Complex
T18065 524-533 NNP denotes Molecular
T18064 520-523 NNP denotes CD3
T18063 516-519 CC denotes and
T18062 503-515 NNPS denotes eBiosciences
T18061 498-502 IN denotes from
T18060 496-497 -RRB- denotes )
T18059 492-496 NNP denotes NGZB
T18058 491-492 -LRB- denotes (
T18057 486-490 NNP denotes FITC
T18056 484-485 NNP denotes B
T18055 475-483 NNP denotes Granzyme
T18054 473-474 , denotes ,
T18053 472-473 -RRB- denotes )
T18052 466-472 NNP denotes MEL-14
T18051 465-466 -LRB- denotes (
T18050 462-464 NNP denotes PE
T18049 456-461 NNP denotes CD62L
T18048 454-455 , denotes ,
T18047 453-454 -RRB- denotes )
T18046 450-453 NNP denotes BM8
T18045 449-450 -LRB- denotes (
T18044 445-448 NNP denotes APC
T18043 439-444 NNP denotes F4/80
T18042 437-438 , denotes ,
T18041 436-437 -RRB- denotes )
T18040 432-436 NN denotes N418
T18039 431-432 -LRB- denotes (
T18038 428-430 CD denotes .5
T18037 419-428 NNP denotes PerCP-Cy5
T18036 413-418 NNP denotes CD11c
T18035 411-412 , denotes ,
T18034 410-411 -RRB- denotes )
T18033 405-410 CD denotes .15.2
T18032 399-405 NNP denotes M5/114
T18031 398-399 -LRB- denotes (
T18030 393-397 NNP denotes FITC
T18029 391-392 -RRB- denotes )
T18028 384-391 NNP denotes I-A/I-E
T18027 383-384 -LRB- denotes (
T17996 203-206 DT denotes the
T17995 199-202 IN denotes For
T17994 197-198 . denotes .
T17993 193-197 NN denotes mesh
T17992 187-192 NN denotes nylon
T17991 184-186 NN denotes µm
T17990 181-183 CD denotes 40
T17989 177-180 CC denotes and
T17988 174-176 NN denotes µm
T17987 171-173 CD denotes 70
T17986 169-170 DT denotes a
T17985 161-168 IN denotes through
T17984 152-160 VBN denotes filtered
T17983 147-151 VBD denotes were
T17982 139-146 NNS denotes samples
T17981 137-138 , denotes ,
T17980 125-137 RB denotes Subsequently
T17979 123-124 . denotes .
T17978 120-123 NN denotes min
T17977 117-119 CD denotes 30
T17976 113-116 IN denotes for
T17975 111-112 NNP denotes C
T17974 110-111 CD denotes °
T17973 108-110 CD denotes 37
T17972 105-107 IN denotes at
T17971 103-104 -RRB- denotes )
T17970 98-103 NNP denotes Roche
T17969 96-97 : denotes ;
T17968 92-96 NNP denotes U/ml
T17967 88-91 CD denotes 100
T17966 87-88 -LRB- denotes (
T17965 81-86 NNP denotes DNAse
T17964 77-80 CC denotes and
T17963 75-76 -RRB- denotes )
T17962 70-75 NNP denotes Sigma
T17961 68-69 : denotes ;
T17960 63-68 NN denotes mg/ml
T17959 61-62 CD denotes 1
T17958 60-61 -LRB- denotes (
T17957 57-59 NNP denotes IV
T17956 52-56 NN denotes type
T17955 40-51 NN denotes collagenase
T17954 35-39 IN denotes with
T17953 25-34 VBN denotes incubated
T17952 21-24 CC denotes and
T17951 11-20 VBN denotes dissected
T17950 6-10 VBD denotes were
T18024 359-367 VBN denotes directed
T18023 348-358 NNS denotes antibodies
T18022 337-347 JJ denotes monoclonal
T18021 332-336 IN denotes with
T18020 324-331 VBN denotes stained
T18019 319-323 VBD denotes were
T17949 0-5 NNS denotes Lungs
T18026 376-382 NNP denotes MHC-II
T18025 368-375 IN denotes against
T18018 313-318 NNS denotes Cells
T18017 311-312 . denotes .
T18016 307-311 NNP denotes EDTA
T18015 304-306 NNP denotes mM
T18014 302-303 CD denotes 1
T18013 297-301 IN denotes with
T18012 292-296 NNP denotes HBSS
T18011 287-291 IN denotes with
T18010 281-286 NNS denotes times
T18009 279-280 CD denotes 4
T18008 271-278 VBN denotes flushed
T18007 267-270 VBD denotes was
T18006 261-266 NNS denotes lumen
T18005 254-260 NN denotes airway
T18004 250-253 CC denotes and
T18003 240-249 VBN denotes canulated
T18002 235-239 VBD denotes were
T18001 227-234 NN denotes trachea
T18000 225-226 , denotes ,
T17999 222-225 NNP denotes BAL
T17998 219-221 IN denotes of
T17997 207-218 NN denotes preparation
R13590 T17949 T17951 nsubjpass Lungs,dissected
R13591 T17950 T17951 auxpass were,dissected
R13592 T17951 T17951 ROOT dissected,dissected
R13593 T17952 T17951 cc and,dissected
R13594 T17953 T17951 conj incubated,dissected
R13595 T17954 T17953 prep with,incubated
R13596 T17955 T17956 compound collagenase,type
R13597 T17956 T17957 compound type,IV
R13598 T17957 T17954 pobj IV,with
R13599 T17958 T17960 punct (,mg/ml
R13600 T17959 T17960 nummod 1,mg/ml
R13601 T17960 T17957 appos mg/ml,IV
R13602 T17961 T17962 punct ;,Sigma
R13603 T17962 T17962 ROOT Sigma,Sigma
R13604 T17963 T17962 punct ),Sigma
R13605 T17964 T17962 cc and,Sigma
R13606 T17965 T17962 conj DNAse,Sigma
R13607 T17966 T17968 punct (,U/ml
R13608 T17967 T17968 nummod 100,U/ml
R13609 T17968 T17962 conj U/ml,Sigma
R13610 T17969 T17968 punct ;,U/ml
R13611 T17970 T17968 conj Roche,U/ml
R13612 T17971 T17968 punct ),U/ml
R13613 T17972 T17962 prep at,Sigma
R13614 T17973 T17974 nummod 37,°
R13615 T17974 T17972 pobj °,at
R13616 T17975 T17962 conj C,Sigma
R13617 T17976 T17962 prep for,Sigma
R13618 T17977 T17978 nummod 30,min
R13619 T17978 T17976 pobj min,for
R13620 T17979 T17951 punct .,dissected
R13621 T17980 T17984 advmod Subsequently,filtered
R13622 T17981 T17984 punct ",",filtered
R13623 T17982 T17984 nsubjpass samples,filtered
R13624 T17983 T17984 auxpass were,filtered
R13625 T17984 T17984 ROOT filtered,filtered
R13626 T17985 T17984 prep through,filtered
R13627 T17986 T17988 det a,µm
R13628 T17987 T17988 nummod 70,µm
R13629 T17988 T17985 pobj µm,through
R13630 T17989 T17988 cc and,µm
R13631 T17990 T17991 nummod 40,µm
R13632 T17991 T17993 compound µm,mesh
R13633 T17992 T17993 compound nylon,mesh
R13634 T17993 T17988 conj mesh,µm
R13635 T17994 T17984 punct .,filtered
R13636 T17995 T18003 prep For,canulated
R13637 T17996 T17997 det the,preparation
R13638 T17997 T17995 pobj preparation,For
R13639 T17998 T17997 prep of,preparation
R13640 T17999 T17998 pobj BAL,of
R13641 T18000 T18003 punct ",",canulated
R13642 T18001 T18003 nsubjpass trachea,canulated
R13643 T18002 T18003 auxpass were,canulated
R13644 T18003 T18003 ROOT canulated,canulated
R13645 T18004 T18003 cc and,canulated
R13646 T18005 T18006 compound airway,lumen
R13647 T18006 T18008 nsubjpass lumen,flushed
R13648 T18007 T18008 auxpass was,flushed
R13649 T18008 T18003 conj flushed,canulated
R13650 T18009 T18010 nummod 4,times
R13651 T18010 T18008 npadvmod times,flushed
R13652 T18011 T18008 prep with,flushed
R13653 T18012 T18011 pobj HBSS,with
R13654 T18013 T18008 prep with,flushed
R13655 T18014 T18016 nummod 1,EDTA
R13656 T18015 T18016 compound mM,EDTA
R13657 T18016 T18013 pobj EDTA,with
R13658 T18017 T18008 punct .,flushed
R13659 T18018 T18020 nsubjpass Cells,stained
R13660 T18019 T18020 auxpass were,stained
R13661 T18020 T18020 ROOT stained,stained
R13662 T18021 T18020 prep with,stained
R13663 T18022 T18023 amod monoclonal,antibodies
R13664 T18023 T18021 pobj antibodies,with
R13665 T18024 T18020 conj directed,stained
R13666 T18025 T18024 prep against,directed
R13667 T18026 T18025 pobj MHC-II,against
R13668 T18027 T18026 punct (,MHC-II
R13669 T18028 T18026 appos I-A/I-E,MHC-II
R13670 T18029 T18026 punct ),MHC-II
R13671 T18030 T18026 conj FITC,MHC-II
R13672 T18031 T18030 punct (,FITC
R13673 T18032 T18030 appos M5/114,FITC
R13674 T18033 T18032 nummod .15.2,M5/114
R13675 T18034 T18030 punct ),FITC
R13676 T18035 T18024 punct ",",directed
R13677 T18036 T18037 compound CD11c,PerCP-Cy5
R13678 T18037 T18038 compound PerCP-Cy5,.5
R13679 T18038 T18040 nummod .5,N418
R13680 T18039 T18040 punct (,N418
R13681 T18040 T18020 npadvmod N418,stained
R13682 T18041 T18040 punct ),N418
R13683 T18042 T18040 punct ",",N418
R13684 T18043 T18044 compound F4/80,APC
R13685 T18044 T18040 appos APC,N418
R13686 T18045 T18046 punct (,BM8
R13687 T18046 T18044 appos BM8,APC
R13688 T18047 T18046 punct ),BM8
R13689 T18048 T18044 punct ",",APC
R13690 T18049 T18050 compound CD62L,PE
R13691 T18050 T18044 appos PE,APC
R13692 T18051 T18052 punct (,MEL-14
R13693 T18052 T18050 appos MEL-14,PE
R13694 T18053 T18050 punct ),PE
R13695 T18054 T18044 punct ",",APC
R13696 T18055 T18057 compound Granzyme,FITC
R13697 T18056 T18057 compound B,FITC
R13698 T18057 T18044 appos FITC,APC
R13699 T18058 T18059 punct (,NGZB
R13700 T18059 T18057 appos NGZB,FITC
R13701 T18060 T18057 punct ),FITC
R13702 T18061 T18057 prep from,FITC
R13703 T18062 T18061 pobj eBiosciences,from
R13704 T18063 T18062 cc and,eBiosciences
R13705 T18064 T18065 compound CD3,Molecular
R13706 T18065 T18062 conj Molecular,eBiosciences
R13707 T18066 T18068 amod Complex,v450
R13708 T18067 T18068 compound Horizon,v450
R13709 T18068 T18065 appos v450,Molecular
R13710 T18069 T18070 punct (,17A2
R13711 T18070 T18068 appos 17A2,v450
R13712 T18071 T18070 punct ),17A2
R13713 T18072 T18065 punct ",",Molecular
R13714 T18073 T18074 compound Ly6C,Horizon
R13715 T18074 T18065 appos Horizon,Molecular
R13716 T18075 T18074 nummod v450,Horizon
R13717 T18076 T18077 punct (,AL-21
R13718 T18077 T18074 appos AL-21,Horizon
R13719 T18078 T18077 punct ),AL-21
R13720 T18079 T18074 punct ",",Horizon
R13721 T18080 T18081 compound Ly6G,PE
R13722 T18081 T18065 appos PE,Molecular
R13723 T18082 T18083 punct (,1A8
R13724 T18083 T18081 appos 1A8,PE
R13725 T18084 T18081 punct ),PE
R13726 T18085 T18065 punct ",",Molecular
R13727 T18086 T18087 compound CD11b,APC-Cy7
R13728 T18087 T18065 appos APC-Cy7,Molecular
R13729 T18088 T18089 punct (,M1/70
R13730 T18089 T18087 appos M1/70,APC-Cy7
R13731 T18090 T18087 punct ),APC-Cy7
R13732 T18091 T18065 punct ",",Molecular
R13733 T18092 T18093 compound CD8α,PerCP
R13734 T18093 T18065 appos PerCP,Molecular
R13735 T18094 T18095 punct (,53-6
R13736 T18095 T18096 nummod 53-6,.7
R13737 T18096 T18093 appos .7,PerCP
R13738 T18097 T18093 punct ),PerCP
R13739 T18098 T18065 punct ",",Molecular
R13740 T18099 T18100 compound IFNγ,Alexa
R13741 T18100 T18065 appos Alexa,Molecular
R13742 T18101 T18100 nummod 647,Alexa
R13743 T18102 T18103 punct (,XMG1
R13744 T18103 T18100 appos XMG1,Alexa
R13745 T18104 T18103 nummod .2,XMG1
R13746 T18105 T18103 punct ),XMG1
R13747 T18106 T18100 cc and,Alexa
R13748 T18107 T18100 conj CD16/32,Alexa
R13749 T18108 T18110 punct (,G2
R13750 T18109 T18110 nummod 2.4,G2
R13751 T18110 T18107 appos G2,CD16/32
R13752 T18111 T18110 punct ),G2
R13753 T18112 T18110 prep from,G2
R13754 T18113 T18114 compound BD,Pharmingen
R13755 T18114 T18112 pobj Pharmingen,from
R13756 T18115 T18040 punct .,N418
R13757 T18116 T18118 nsubjpass Samples,acquired
R13758 T18117 T18118 auxpass were,acquired
R13759 T18118 T18118 ROOT acquired,acquired
R13760 T18119 T18118 prep on,acquired
R13761 T18120 T18122 det a,Cytometer
R13762 T18121 T18122 compound LSRII,Cytometer
R13763 T18122 T18119 pobj Cytometer,on
R13764 T18123 T18118 cc and,acquired
R13765 T18124 T18118 conj analyzed,acquired
R13766 T18125 T18124 xcomp using,analyzed
R13767 T18126 T18127 compound FACSDiva,software
R13768 T18127 T18125 dobj software,using
R13769 T18128 T18127 punct (,software
R13770 T18129 T18130 compound BD,Biosciences
R13771 T18130 T18127 appos Biosciences,software
R13772 T18131 T18127 punct ),software
R13773 T18132 T18118 punct .,acquired
R13774 T18133 T18134 compound Propidium,iodide
R13775 T18134 T18136 nsubjpass iodide,used
R13776 T18135 T18136 auxpass was,used
R13777 T18136 T18136 ROOT used,used
R13778 T18137 T18138 aux to,discriminate
R13779 T18138 T18136 xcomp discriminate,used
R13780 T18139 T18138 prep between,discriminate
R13781 T18140 T18143 amod live,cells
R13782 T18141 T18140 cc and,live
R13783 T18142 T18140 conj dead,live
R13784 T18143 T18139 pobj cells,between
R13785 T18144 T18136 punct .,used

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T18182 698-711 Protein denotes BD Pharmingen
T18181 628-663 Protein denotes CD8α PerCP (53-6.7), IFNγ Alexa 647
T18180 605-610 Protein denotes CD11b
T18179 599-602 Protein denotes 1A8
T18178 590-597 Protein denotes Ly6G PE
T18177 563-580 Protein denotes Ly6C Horizon v450
T18176 456-461 Protein denotes CD62L
T18175 413-418 Protein denotes CD11c
T18174 40-51 Protein denotes collagenase

testone

Id Subject Object Predicate Lexical cue
T17807 677-681 Protein denotes CD16
T17806 649-653 Protein denotes IFNγ
T17805 628-632 Protein denotes CD8α
T17804 590-594 Protein denotes Ly6G
T17803 520-523 Protein denotes CD3
T17802 475-485 Protein denotes Granzyme B
T17801 456-461 Protein denotes CD62L
T17800 40-59 Protein denotes collagenase type IV