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PMC:3291650 / 379-595 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T20 84-89 Protein denotes RIG-I
T19 54-83 Protein denotes pathogen recognition receptor
T15 84-89 Protein denotes RIG-I
T14 54-83 Protein denotes pathogen recognition receptor

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T144 206-214 VB denotes regulate
T143 201-205 WDT denotes that
T142 190-200 NN denotes mechanisms
T141 186-189 DT denotes the
T140 172-185 VB denotes Understanding
T139 160-170 NN denotes interferon
T138 150-159 JJ denotes antiviral
T137 146-149 CC denotes and
T136 136-145 NN denotes cytokines
T135 120-135 JJ denotes proinflammatory
T134 117-119 IN denotes of
T133 106-116 NN denotes production
T132 102-105 DT denotes the
T131 94-101 VB denotes induces
T130 90-93 CC denotes and
T129 84-89 NN denotes RIG-I
T128 75-83 NN denotes receptor
T127 63-74 NN denotes recognition
T126 54-62 NN denotes pathogen
T125 40-53 JJ denotes intracellular
T124 36-39 DT denotes the
T123 26-35 VB denotes activates
T122 20-25 WDT denotes which
T121 18-19 -COMMA- denotes ,
T120 13-18 NN denotes cycle
T119 8-12 NN denotes life
R50 T120 T119 arg1Of cycle,life
R51 T120 T121 arg1Of cycle,","
R52 T120 T122 arg1Of cycle,which
R53 T120 T123 arg1Of cycle,activates
R54 T120 T131 arg1Of cycle,induces
R55 T123 T130 arg1Of activates,and
R56 T129 T123 arg2Of RIG-I,activates
R57 T129 T124 arg1Of RIG-I,the
R58 T129 T125 arg1Of RIG-I,intracellular
R59 T129 T126 arg1Of RIG-I,pathogen
R60 T129 T127 arg1Of RIG-I,recognition
R61 T129 T128 arg1Of RIG-I,receptor
R62 T131 T130 arg2Of induces,and
R63 T133 T131 arg2Of production,induces
R64 T133 T132 arg1Of production,the
R65 T133 T134 arg1Of production,of
R66 T136 T135 arg1Of cytokines,proinflammatory
R67 T136 T137 arg1Of cytokines,and
R68 T137 T134 arg2Of and,of
R69 T139 T137 arg2Of interferon,and
R70 T139 T138 arg1Of interferon,antiviral
R73 T142 T140 arg2Of mechanisms,Understanding
R74 T142 T141 arg1Of mechanisms,the
R75 T142 T143 arg1Of mechanisms,that
R76 T142 T144 arg1Of mechanisms,regulate

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T41 54-83 Protein denotes pathogen recognition receptor
T42 84-89 Protein denotes RIG-I

GO-CC

Id Subject Object Predicate Lexical cue
T61 40-53 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular

simple1

Id Subject Object Predicate Lexical cue
T67 84-89 Protein denotes RIG-I
T66 54-83 Protein denotes pathogen recognition receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T608 54-83 Protein denotes pathogen recognition receptor
T609 84-89 Protein denotes RIG-I
T612 26-35 Positive_regulation denotes activates
R506 T608 T612 themeOf pathogen recognition receptor,activates
R507 T609 T612 themeOf RIG-I,activates

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T543 54-83 Protein denotes pathogen recognition receptor
T544 84-89 Protein denotes RIG-I
T547 26-35 Positive_regulation denotes activates
R498 T544 T547 themeOf RIG-I,activates

DLUT931

Id Subject Object Predicate Lexical cue
T550 54-83 Protein denotes pathogen recognition receptor
T551 84-89 Protein denotes RIG-I
T554 26-35 Positive_regulation denotes activates
R501 T550 T554 themeOf pathogen recognition receptor,activates
R502 T551 T554 themeOf RIG-I,activates

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T651 102-170 Gene_expression denotes the production of proinflammatory cytokines and antiviral interferon
T650 102-170 Gene_expression denotes the production of proinflammatory cytokines and antiviral interferon
T649 36-90 Localization denotes the intracellular pathogen recognition receptor RIG-I
T642 36-89 Protein denotes the intracellular pathogen recognition receptor RIG-I
T615 120-145 Protein denotes proinflammatory cytokines
T623 150-159 Entity denotes antiviral
T628 150-170 Protein denotes antiviral interferon
T634 36-89 Protein denotes the intracellular pathogen recognition receptor RIG-I
T637 40-53 Entity denotes intracellular
R510 T615 T651 themeOf proinflammatory cytokines,the production of proinflammatory cytokines and antiviral interferon
R513 T628 T650 themeOf antiviral interferon,the production of proinflammatory cytokines and antiviral interferon
R515 T634 T649 themeOf the intracellular pathogen recognition receptor RIG-I,the intracellular pathogen recognition receptor RIG-I
R516 T637 T649 locationOf intracellular,the intracellular pathogen recognition receptor RIG-I

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T377 206-214 VBP denotes regulate
T376 201-205 WDT denotes that
T375 190-200 NNS denotes mechanisms
T374 186-189 DT denotes the
T373 172-185 VBG denotes Understanding
T372 170-171 . denotes .
T371 160-170 NN denotes interferon
T370 150-159 JJ denotes antiviral
T369 146-149 CC denotes and
T368 136-145 NNS denotes cytokines
T367 120-135 JJ denotes proinflammatory
T366 117-119 IN denotes of
T365 106-116 NN denotes production
T364 102-105 DT denotes the
T363 94-101 VBZ denotes induces
T362 90-93 CC denotes and
T361 84-89 NNP denotes RIG-I
T360 75-83 NN denotes receptor
T359 63-74 NN denotes recognition
T358 54-62 NN denotes pathogen
T357 40-53 JJ denotes intracellular
T356 36-39 DT denotes the
T355 26-35 VBZ denotes activates
T354 20-25 WDT denotes which
T353 18-19 , denotes ,
T352 13-18 NN denotes cycle
T351 8-12 NN denotes life
R271 T351 T352 compound life,cycle
R273 T353 T352 punct ",",cycle
R274 T354 T355 nsubj which,activates
R275 T355 T352 relcl activates,cycle
R276 T356 T359 det the,recognition
R277 T357 T359 amod intracellular,recognition
R278 T358 T359 compound pathogen,recognition
R279 T359 T355 dobj recognition,activates
R280 T360 T361 compound receptor,RIG-I
R281 T361 T359 appos RIG-I,recognition
R282 T362 T355 cc and,activates
R283 T363 T355 conj induces,activates
R284 T364 T365 det the,production
R285 T365 T363 dobj production,induces
R286 T366 T365 prep of,production
R287 T367 T368 amod proinflammatory,cytokines
R288 T368 T366 pobj cytokines,of
R289 T369 T368 cc and,cytokines
R290 T370 T371 amod antiviral,interferon
R291 T371 T368 conj interferon,cytokines
R294 T374 T375 det the,mechanisms
R295 T375 T373 dobj mechanisms,Understanding
R296 T376 T377 nsubj that,regulate
R297 T377 T375 relcl regulate,mechanisms

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T568 94-101 Positive_regulation denotes induces
T567 106-116 Gene_expression denotes production
T566 160-170 Protein denotes interferon
T565 84-89 Protein denotes RIG-I
R457 T566 T567 themeOf interferon,production
R458 T567 T568 themeOf production,induces

testone

Id Subject Object Predicate Lexical cue
T7 84-89 Protein denotes RIG-I
T6 54-83 Protein denotes pathogen recognition receptor