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PMC:3291650 / 36929-37129 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16751 194-199 NN denotes M-CSF
T16750 182-193 JJ denotes recombinant
T16749 176-181 NN denotes ng/ml
T16748 173-175 CD denotes 40
T16747 169-172 CC denotes and
T16746 157-168 NN denotes antibiotics
T16745 155-156 -COMMA- denotes ,
T16744 147-155 NN denotes pyruvate
T16743 140-146 NN denotes sodium
T16742 137-139 NN denotes mM
T16741 133-136 CD denotes 0.4
T16740 131-132 -COMMA- denotes ,
T16739 120-131 NN denotes L-glutamine
T16738 117-119 NN denotes mM
T16737 115-116 CD denotes 2
T16736 113-114 -COMMA- denotes ,
T16735 110-113 NN denotes FCS
T16734 108-109 NN denotes %
T16733 106-108 CD denotes 10
T16732 101-105 IN denotes with
T16731 88-100 VB denotes supplemented
T16730 86-87 -RRB- denotes )
T16729 81-86 NNP denotes Gibco
T16728 80-81 -LRB- denotes (
T16727 75-79 CD denotes 1640
T16726 70-74 NN denotes RPMI
T16725 67-69 IN denotes in
T16724 62-66 NN denotes days
T16723 60-61 CD denotes 7
T16722 51-59 VB denotes cultured
T16721 46-50 VB denotes were
T16720 40-45 NN denotes cells
T16719 33-39 NN denotes marrow
T16718 28-32 NN denotes bone
T16717 26-27 -COMMA- denotes ,
T16716 22-26 NN denotes BMDM
T16715 19-21 IN denotes of
T16714 8-18 NN denotes generation
T16713 4-7 DT denotes the
T16712 0-3 IN denotes For
R12558 T16714 T16712 arg2Of generation,For
R12559 T16714 T16713 arg1Of generation,the
R12560 T16714 T16715 arg1Of generation,of
R12561 T16716 T16715 arg2Of BMDM,of
R12562 T16720 T16718 arg1Of cells,bone
R12563 T16720 T16719 arg1Of cells,marrow
R12564 T16720 T16721 arg1Of cells,were
R12565 T16720 T16722 arg2Of cells,cultured
R12566 T16722 T16712 arg1Of cultured,For
R12567 T16722 T16717 arg1Of cultured,","
R12568 T16722 T16721 arg2Of cultured,were
R12569 T16722 T16724 arg1Of cultured,days
R12570 T16724 T16723 arg1Of days,7
R12571 T16724 T16725 arg1Of days,in
R12572 T16724 T16731 arg2Of days,supplemented
R12573 T16726 T16725 arg2Of RPMI,in
R12574 T16726 T16727 arg1Of RPMI,1640
R12575 T16726 T16728 arg1Of RPMI,(
R12576 T16729 T16728 arg2Of Gibco,(
R12577 T16730 T16728 arg3Of ),(
R12578 T16731 T16732 arg1Of supplemented,with
R12579 T16733 T16734 arg1Of 10,%
R12580 T16735 T16733 arg1Of FCS,10
R12581 T16735 T16736 arg1Of FCS,","
R12582 T16736 T16740 arg1Of ",",","
R12583 T16737 T16738 arg1Of 2,mM
R12584 T16739 T16736 arg2Of L-glutamine,","
R12585 T16739 T16737 arg1Of L-glutamine,2
R12586 T16740 T16745 arg1Of ",",","
R12587 T16741 T16742 arg1Of 0.4,mM
R12588 T16744 T16740 arg2Of pyruvate,","
R12589 T16744 T16741 arg1Of pyruvate,0.4
R12590 T16744 T16743 arg1Of pyruvate,sodium
R12591 T16745 T16747 arg1Of ",",and
R12592 T16746 T16745 arg2Of antibiotics,","
R12593 T16747 T16732 arg2Of and,with
R12594 T16751 T16747 arg2Of M-CSF,and
R12595 T16751 T16748 arg1Of M-CSF,40
R12596 T16751 T16749 arg1Of M-CSF,ng/ml
R12597 T16751 T16750 arg1Of M-CSF,recombinant

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17081 196-199 http://www.uniprot.org/uniprot/P04141 denotes CSF
T17080 194-199 http://www.uniprot.org/uniprot/P09603 denotes M-CSF

UBERON-AE

Id Subject Object Predicate Lexical cue
T16540 28-39 http://purl.obolibrary.org/obo/UBERON_0002371 denotes bone marrow

GO-BP

Id Subject Object Predicate Lexical cue
T16556 28-45 http://purl.obolibrary.org/obo/GO_0071838 denotes bone marrow cells
T16555 28-45 http://purl.obolibrary.org/obo/GO_0071839 denotes bone marrow cells

GO-CC

Id Subject Object Predicate Lexical cue
T16562 40-45 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T16547 0-200 Sentence denotes For the generation of BMDM, bone marrow cells were cultured 7 days in RPMI 1640 (Gibco) supplemented with 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate, antibiotics and 40 ng/ml recombinant M-CSF.
T236 0-200 Sentence denotes For the generation of BMDM, bone marrow cells were cultured 7 days in RPMI 1640 (Gibco) supplemented with 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate, antibiotics and 40 ng/ml recombinant M-CSF.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17137 106-155 Entity denotes 10% FCS, 2 mM L-glutamine, 0.4 mM sodium pyruvate
T17156 176-199 Protein denotes ng/ml recombinant M-CSF
T17155 115-131 Entity denotes 2 mM L-glutamine
T17143 28-45 Entity denotes bone marrow cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17005 199-200 . denotes .
T17004 194-199 NNP denotes M-CSF
T17003 182-193 JJ denotes recombinant
T17002 176-181 JJ denotes ng/ml
T17001 173-175 CD denotes 40
T17000 169-172 CC denotes and
T16999 157-168 NNS denotes antibiotics
T16998 155-156 , denotes ,
T16997 147-155 NN denotes pyruvate
T16996 140-146 NN denotes sodium
T16995 137-139 NNP denotes mM
T16994 133-136 CD denotes 0.4
T16993 131-132 , denotes ,
T16992 120-131 NNP denotes L-glutamine
T16991 117-119 NNP denotes mM
T16990 115-116 CD denotes 2
T16989 113-114 , denotes ,
T16988 110-113 NNP denotes FCS
T16987 108-109 NN denotes %
T16986 106-108 CD denotes 10
T16985 101-105 IN denotes with
T16984 88-100 VBN denotes supplemented
T16983 86-87 -RRB- denotes )
T16982 81-86 NNP denotes Gibco
T16981 80-81 -LRB- denotes (
T16980 75-79 CD denotes 1640
T16979 70-74 NNP denotes RPMI
T16978 67-69 IN denotes in
T16977 62-66 NNS denotes days
T16976 60-61 CD denotes 7
T16975 51-59 VBN denotes cultured
T16974 46-50 VBD denotes were
T16973 40-45 NNS denotes cells
T16972 33-39 NN denotes marrow
T16971 28-32 NN denotes bone
T16970 26-27 , denotes ,
T16969 22-26 NNP denotes BMDM
T16968 19-21 IN denotes of
T16967 8-18 NN denotes generation
T16966 4-7 DT denotes the
T16965 0-3 IN denotes For
R12813 T16965 T16975 prep For,cultured
R12814 T16966 T16967 det the,generation
R12815 T16967 T16965 pobj generation,For
R12816 T16968 T16967 prep of,generation
R12817 T16969 T16968 pobj BMDM,of
R12818 T16970 T16969 punct ",",BMDM
R12819 T16971 T16972 compound bone,marrow
R12820 T16972 T16973 compound marrow,cells
R12821 T16973 T16975 nsubjpass cells,cultured
R12822 T16974 T16975 auxpass were,cultured
R12823 T16975 T16975 ROOT cultured,cultured
R12824 T16976 T16977 nummod 7,days
R12825 T16977 T16975 npadvmod days,cultured
R12826 T16978 T16975 prep in,cultured
R12827 T16979 T16984 nsubj RPMI,supplemented
R12828 T16980 T16979 nummod 1640,RPMI
R12829 T16981 T16982 punct (,Gibco
R12830 T16982 T16979 appos Gibco,RPMI
R12831 T16983 T16979 punct ),RPMI
R12832 T16984 T16975 conj supplemented,cultured
R12833 T16985 T16984 prep with,supplemented
R12834 T16986 T16987 nummod 10,%
R12835 T16987 T16988 compound %,FCS
R12836 T16988 T16985 pobj FCS,with
R12837 T16989 T16988 punct ",",FCS
R12838 T16990 T16992 nummod 2,L-glutamine
R12839 T16991 T16992 compound mM,L-glutamine
R12840 T16992 T16988 conj L-glutamine,FCS
R12841 T16993 T16992 punct ",",L-glutamine
R12842 T16994 T16997 nummod 0.4,pyruvate
R12843 T16995 T16997 compound mM,pyruvate
R12844 T16996 T16997 compound sodium,pyruvate
R12845 T16997 T16992 appos pyruvate,L-glutamine
R12846 T16998 T16997 punct ",",pyruvate
R12847 T16999 T16997 conj antibiotics,pyruvate
R12848 T17000 T16999 cc and,antibiotics
R12849 T17001 T17004 nummod 40,M-CSF
R12850 T17002 T17003 advmod ng/ml,recombinant
R12851 T17003 T17004 amod recombinant,M-CSF
R12852 T17004 T16999 conj M-CSF,antibiotics
R12853 T17005 T16984 punct .,supplemented