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PMC:3291650 / 36452-36668 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T16539 100-104 Protein denotes IRF7
T16538 94-98 Protein denotes IRF3
T16537 100-104 Protein denotes IRF7
T16536 94-98 Protein denotes IRF3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16672 214-216 NNP denotes J.
T16671 211-213 IN denotes by
T16670 202-210 VB denotes provided
T16669 195-201 RB denotes kindly
T16668 194-195 -LRB- denotes (
T16667 179-193 NN denotes pGL3-IFNα4-luc
T16666 177-178 -COMMA- denotes ,
T16665 176-177 -RRB- denotes )
T16664 168-176 NN denotes LMBP4011
T16663 167-168 -LRB- denotes (
T16662 157-166 NN denotes pISRE-luc
T16661 155-156 -COMMA- denotes ,
T16660 154-155 -RRB- denotes )
T16659 146-154 NN denotes LMBP3248
T16658 145-146 -LRB- denotes (
T16657 137-144 NN denotes pConLuc
T16656 124-136 RB denotes respectively
T16655 123-124 -LRB- denotes (
T16654 114-122 NN denotes plasmids
T16653 105-113 NN denotes reporter
T16652 100-104 NN denotes IRF7
T16651 98-99 -COMMA- denotes ,
T16650 94-98 NN denotes IRF3
T16649 92-93 -COMMA- denotes ,
T16648 87-92 NN denotes NF-κB
T16647 85-86 -COMMA- denotes ,
T16646 84-85 -RRB- denotes )
T16645 83-84 -RRB- denotes )
T16644 78-83 NNP denotes Tokyo
T16643 75-77 IN denotes of
T16642 64-74 NNP denotes University
T16641 62-63 -COMMA- denotes ,
T16640 54-62 NNP denotes Medicine
T16639 51-53 IN denotes of
T16638 43-50 NNP denotes Faculty
T16637 39-42 CC denotes and
T16636 30-38 NNP denotes Medicine
T16635 27-29 IN denotes of
T16634 20-26 NNP denotes School
T16633 11-19 NNP denotes Graduate
T16632 9-10 -COMMA- denotes ,
T16631 0-9 NNP denotes Taniguchi
R12483 T16631 T16632 arg1Of Taniguchi,","
R12484 T16632 T16637 arg1Of ",",and
R12485 T16634 T16632 arg2Of School,","
R12486 T16634 T16633 arg1Of School,Graduate
R12487 T16634 T16635 arg1Of School,of
R12488 T16636 T16635 arg2Of Medicine,of
R12491 T16638 T16637 arg2Of Faculty,and
R12492 T16638 T16639 arg1Of Faculty,of
R12493 T16640 T16639 arg2Of Medicine,of
R12494 T16642 T16641 arg2Of University,","
R12495 T16642 T16643 arg1Of University,of
R12496 T16644 T16643 arg2Of Tokyo,of
R12497 T16648 T16649 arg1Of NF-κB,","
R12498 T16649 T16651 arg1Of ",",","
R12499 T16650 T16649 arg2Of IRF3,","
R12500 T16654 T16651 arg2Of plasmids,","
R12501 T16654 T16652 arg1Of plasmids,IRF7
R12502 T16654 T16653 arg1Of plasmids,reporter
R12503 T16657 T16658 arg1Of pConLuc,(
R12504 T16657 T16661 arg1Of pConLuc,","
R12505 T16659 T16658 arg2Of LMBP3248,(
R12506 T16660 T16658 arg3Of ),(
R12507 T16661 T16655 arg2Of ",",(
R12508 T16661 T16656 arg1Of ",",respectively
R12509 T16661 T16666 arg1Of ",",","
R12510 T16662 T16661 arg2Of pISRE-luc,","
R12511 T16662 T16663 arg1Of pISRE-luc,(
R12512 T16664 T16663 arg2Of LMBP4011,(
R12513 T16665 T16663 arg3Of ),(
R12514 T16667 T16668 arg1Of pGL3-IFNα4-luc,(
R12516 T16670 T16668 arg2Of provided,(
R12517 T16670 T16669 arg1Of provided,kindly

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T16554 100-104 Protein denotes IRF7
T16553 94-98 Protein denotes IRF3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17079 94-98 http://www.uniprot.org/uniprot/Q14653 denotes IRF3
T17078 100-104 http://www.uniprot.org/uniprot/Q92985 denotes IRF7

sentences

Id Subject Object Predicate Lexical cue
T233 0-216 Sentence denotes Taniguchi, Graduate School of Medicine and Faculty of Medicine, University of Tokyo)), NF-κB, IRF3, IRF7 reporter plasmids (respectively pConLuc (LMBP3248), pISRE-luc (LMBP4011), pGL3-IFNα4-luc (kindly provided by J.

simple1

Id Subject Object Predicate Lexical cue
T16566 100-104 Protein denotes IRF7
T16565 94-98 Protein denotes IRF3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17133 100-104 Protein denotes IRF7
T17132 94-98 Protein denotes IRF3

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T17083 100-104 Protein denotes IRF7
T17082 94-98 Protein denotes IRF3

DLUT931

Id Subject Object Predicate Lexical cue
T17087 100-104 Protein denotes IRF7
T17086 94-98 Protein denotes IRF3

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17140 30-38 Entity denotes Medicine
T17136 100-104 Protein denotes IRF7
T17151 87-99 Protein denotes NF-κB, IRF3,
T17146 54-62 Entity denotes Medicine
T17144 94-98 Protein denotes IRF3

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16925 214-216 NNP denotes J.
T16924 211-213 IN denotes by
T16923 202-210 VBN denotes provided
T16922 195-201 RB denotes kindly
T16921 194-195 -LRB- denotes (
T16920 179-193 JJ denotes pGL3-IFNα4-luc
T16919 177-178 , denotes ,
T16918 176-177 -RRB- denotes )
T16917 168-176 NNP denotes LMBP4011
T16916 167-168 -LRB- denotes (
T16915 157-166 NNP denotes pISRE-luc
T16914 155-156 , denotes ,
T16913 154-155 -RRB- denotes )
T16912 146-154 NNP denotes LMBP3248
T16911 145-146 -LRB- denotes (
T16910 137-144 NNP denotes pConLuc
T16909 124-136 RB denotes respectively
T16908 123-124 -LRB- denotes (
T16907 114-122 NNS denotes plasmids
T16906 105-113 NN denotes reporter
T16905 100-104 NNP denotes IRF7
T16904 98-99 , denotes ,
T16903 94-98 NNP denotes IRF3
T16902 92-93 , denotes ,
T16901 87-92 NNP denotes NF-κB
T16900 85-86 , denotes ,
T16899 84-85 -RRB- denotes )
T16898 83-84 -RRB- denotes )
T16897 78-83 NNP denotes Tokyo
T16896 75-77 IN denotes of
T16895 64-74 NNP denotes University
T16894 62-63 , denotes ,
T16893 54-62 NNP denotes Medicine
T16892 51-53 IN denotes of
T16891 43-50 NNP denotes Faculty
T16890 39-42 CC denotes and
T16889 30-38 NNP denotes Medicine
T16888 27-29 IN denotes of
T16887 20-26 NNP denotes School
T16886 11-19 NNP denotes Graduate
T16885 9-10 , denotes ,
T16884 0-9 NNP denotes Taniguchi
R12732 T16884 T16887 poss Taniguchi,School
R12733 T16885 T16884 punct ",",Taniguchi
R12734 T16886 T16887 compound Graduate,School
R12736 T16888 T16887 prep of,School
R12737 T16889 T16888 pobj Medicine,of
R12738 T16890 T16889 cc and,Medicine
R12739 T16891 T16889 conj Faculty,Medicine
R12740 T16892 T16891 prep of,Faculty
R12741 T16893 T16892 pobj Medicine,of
R12742 T16894 T16891 punct ",",Faculty
R12743 T16895 T16887 conj University,School
R12744 T16896 T16895 prep of,University
R12745 T16897 T16896 pobj Tokyo,of
R12746 T16898 T16895 punct ),University
R12747 T16899 T16887 punct ),School
R12748 T16900 T16887 punct ",",School
R12749 T16901 T16887 conj NF-κB,School
R12750 T16902 T16901 punct ",",NF-κB
R12751 T16903 T16901 conj IRF3,NF-κB
R12752 T16904 T16903 punct ",",IRF3
R12753 T16905 T16906 compound IRF7,reporter
R12754 T16906 T16907 compound reporter,plasmids
R12755 T16907 T16903 conj plasmids,IRF3
R12756 T16908 T16907 punct (,plasmids
R12757 T16909 T16910 advmod respectively,pConLuc
R12758 T16910 T16907 appos pConLuc,plasmids
R12759 T16911 T16912 punct (,LMBP3248
R12760 T16912 T16910 appos LMBP3248,pConLuc
R12761 T16913 T16910 punct ),pConLuc
R12762 T16914 T16910 punct ",",pConLuc
R12763 T16915 T16910 conj pISRE-luc,pConLuc
R12764 T16916 T16917 punct (,LMBP4011
R12765 T16917 T16915 appos LMBP4011,pISRE-luc
R12766 T16918 T16915 punct ),pISRE-luc
R12767 T16919 T16915 punct ",",pISRE-luc
R12768 T16920 T16915 conj pGL3-IFNα4-luc,pISRE-luc
R12769 T16921 T16923 punct (,provided
R12770 T16922 T16923 advmod kindly,provided
R12771 T16923 T16907 parataxis provided,plasmids
R12772 T16924 T16923 agent by,provided

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T17099 179-193 Protein denotes pGL3-IFNα4-luc
T17098 168-176 Protein denotes LMBP4011
T17097 157-166 Protein denotes pISRE-luc
T17096 100-104 Protein denotes IRF7
T17095 94-98 Protein denotes IRF3
T17094 87-92 Protein denotes NF-κB

testone

Id Subject Object Predicate Lexical cue
T16535 100-104 Protein denotes IRF7
T16534 94-98 Protein denotes IRF3