
PMC:3291650 / 36231-36451
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16630 | 218-220 | NNP | denotes | T. |
T16629 | 215-217 | IN | denotes | by |
T16628 | 206-214 | VB | denotes | provided |
T16627 | 199-205 | RB | denotes | kindly |
T16626 | 198-199 | -LRB- | denotes | ( |
T16625 | 185-197 | NN | denotes | pEF-HA-IRF-7 |
T16624 | 183-184 | -COMMA- | denotes | , |
T16623 | 182-183 | -RRB- | denotes | ) |
T16622 | 178-182 | CD | denotes | 6517 |
T16621 | 173-177 | NN | denotes | LMBP |
T16620 | 172-173 | -LRB- | denotes | ( |
T16619 | 152-171 | NN | denotes | pCAGGS-E-RIG-I-CARD |
T16618 | 150-151 | -COMMA- | denotes | , |
T16617 | 149-150 | -RRB- | denotes | ) |
T16616 | 145-149 | CD | denotes | 3778 |
T16615 | 140-144 | NN | denotes | LMBP |
T16614 | 139-140 | -LRB- | denotes | ( |
T16613 | 125-138 | NN | denotes | pCAGGS-E-hA20 |
T16612 | 124-125 | -LRB- | denotes | ( |
T16611 | 116-123 | NN | denotes | vectors |
T16610 | 105-115 | NN | denotes | expression |
T16609 | 96-104 | JJ | denotes | specific |
T16608 | 91-95 | IN | denotes | with |
T16607 | 84-90 | NN | denotes | method |
T16606 | 71-83 | NN | denotes | transfection |
T16605 | 59-70 | VB | denotes | precipitate |
T16604 | 49-58 | NN | denotes | phosphate |
T16603 | 41-48 | NN | denotes | calcium |
T16602 | 37-40 | DT | denotes | the |
T16601 | 31-36 | VB | denotes | using |
T16600 | 19-30 | VB | denotes | transfected |
T16599 | 14-18 | VB | denotes | were |
T16598 | 8-13 | NN | denotes | cells |
T16597 | 0-7 | NN | denotes | HEK293T |
R12454 | T16598 | T16597 | arg1Of | cells,HEK293T |
R12455 | T16598 | T16599 | arg1Of | cells,were |
R12456 | T16598 | T16600 | arg2Of | cells,transfected |
R12457 | T16600 | T16599 | arg2Of | transfected,were |
R12458 | T16600 | T16601 | modOf | transfected,using |
R12459 | T16604 | T16601 | arg2Of | phosphate,using |
R12460 | T16604 | T16602 | arg1Of | phosphate,the |
R12461 | T16604 | T16603 | arg1Of | phosphate,calcium |
R12462 | T16607 | T16605 | arg2Of | method,precipitate |
R12463 | T16607 | T16606 | arg1Of | method,transfection |
R12464 | T16607 | T16608 | arg1Of | method,with |
R12465 | T16611 | T16608 | arg2Of | vectors,with |
R12466 | T16611 | T16609 | arg1Of | vectors,specific |
R12467 | T16611 | T16610 | arg1Of | vectors,expression |
R12468 | T16613 | T16614 | arg1Of | pCAGGS-E-hA20,( |
R12469 | T16613 | T16618 | arg1Of | pCAGGS-E-hA20,"," |
R12470 | T16615 | T16614 | arg2Of | LMBP,( |
R12471 | T16615 | T16616 | arg1Of | LMBP,3778 |
R12472 | T16617 | T16614 | arg3Of | ),( |
R12473 | T16618 | T16624 | arg1Of | ",","," |
R12474 | T16619 | T16618 | arg2Of | pCAGGS-E-RIG-I-CARD,"," |
R12475 | T16619 | T16620 | arg1Of | pCAGGS-E-RIG-I-CARD,( |
R12476 | T16621 | T16620 | arg2Of | LMBP,( |
R12477 | T16621 | T16622 | arg1Of | LMBP,6517 |
R12478 | T16623 | T16620 | arg3Of | ),( |
R12479 | T16624 | T16612 | arg2Of | ",",( |
R12480 | T16625 | T16624 | arg2Of | pEF-HA-IRF-7,"," |
R12481 | T16628 | T16627 | arg1Of | provided,kindly |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17077 | 192-197 | http://www.uniprot.org/uniprot/Q92985 | denotes | IRF-7 |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16561 | 8-13 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T232 | 0-220 | Sentence | denotes | HEK293T cells were transfected using the calcium phosphate precipitate transfection method with specific expression vectors (pCAGGS-E-hA20 (LMBP 3778), pCAGGS-E-RIG-I-CARD (LMBP 6517), pEF-HA-IRF-7 (kindly provided by T. |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17134 | 105-115 | Gene_expression | denotes | expression |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17088 | 105-115 | Gene_expression | denotes | expression |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17148 | 37-58 | Entity | denotes | the calcium phosphate |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16883 | 218-220 | NNP | denotes | T. |
T16882 | 215-217 | IN | denotes | by |
T16881 | 206-214 | VBN | denotes | provided |
T16880 | 199-205 | RB | denotes | kindly |
T16879 | 198-199 | -LRB- | denotes | ( |
T16878 | 185-197 | NNP | denotes | pEF-HA-IRF-7 |
T16877 | 183-184 | , | denotes | , |
T16876 | 182-183 | -RRB- | denotes | ) |
T16875 | 178-182 | CD | denotes | 6517 |
T16874 | 173-177 | NNP | denotes | LMBP |
T16873 | 172-173 | -LRB- | denotes | ( |
T16872 | 152-171 | NNP | denotes | pCAGGS-E-RIG-I-CARD |
T16871 | 150-151 | , | denotes | , |
T16870 | 149-150 | -RRB- | denotes | ) |
T16869 | 145-149 | CD | denotes | 3778 |
T16868 | 140-144 | NNP | denotes | LMBP |
T16867 | 139-140 | -LRB- | denotes | ( |
T16866 | 125-138 | NN | denotes | pCAGGS-E-hA20 |
T16865 | 124-125 | -LRB- | denotes | ( |
T16864 | 116-123 | NNS | denotes | vectors |
T16863 | 105-115 | NN | denotes | expression |
T16862 | 96-104 | JJ | denotes | specific |
T16861 | 91-95 | IN | denotes | with |
T16860 | 84-90 | NN | denotes | method |
T16859 | 71-83 | NN | denotes | transfection |
T16858 | 59-70 | NN | denotes | precipitate |
T16857 | 49-58 | NN | denotes | phosphate |
T16856 | 41-48 | NN | denotes | calcium |
T16855 | 37-40 | DT | denotes | the |
T16854 | 31-36 | VBG | denotes | using |
T16853 | 19-30 | VBN | denotes | transfected |
T16852 | 14-18 | VBD | denotes | were |
T16851 | 8-13 | NNS | denotes | cells |
T16850 | 0-7 | CD | denotes | HEK293T |
R12698 | T16850 | T16851 | nummod | HEK293T,cells |
R12699 | T16851 | T16853 | nsubjpass | cells,transfected |
R12700 | T16852 | T16853 | auxpass | were,transfected |
R12701 | T16853 | T16853 | ROOT | transfected,transfected |
R12702 | T16854 | T16853 | advcl | using,transfected |
R12703 | T16855 | T16860 | det | the,method |
R12704 | T16856 | T16858 | nsubj | calcium,precipitate |
R12705 | T16857 | T16858 | compound | phosphate,precipitate |
R12706 | T16858 | T16860 | compound | precipitate,method |
R12707 | T16859 | T16860 | compound | transfection,method |
R12708 | T16860 | T16854 | dobj | method,using |
R12709 | T16861 | T16854 | prep | with,using |
R12710 | T16862 | T16864 | amod | specific,vectors |
R12711 | T16863 | T16864 | compound | expression,vectors |
R12712 | T16864 | T16861 | pobj | vectors,with |
R12713 | T16865 | T16866 | punct | (,pCAGGS-E-hA20 |
R12714 | T16866 | T16864 | appos | pCAGGS-E-hA20,vectors |
R12715 | T16867 | T16868 | punct | (,LMBP |
R12716 | T16868 | T16866 | dep | LMBP,pCAGGS-E-hA20 |
R12717 | T16869 | T16868 | nummod | 3778,LMBP |
R12718 | T16870 | T16868 | punct | ),LMBP |
R12719 | T16871 | T16868 | punct | ",",LMBP |
R12720 | T16872 | T16868 | conj | pCAGGS-E-RIG-I-CARD,LMBP |
R12721 | T16873 | T16872 | punct | (,pCAGGS-E-RIG-I-CARD |
R12722 | T16874 | T16872 | appos | LMBP,pCAGGS-E-RIG-I-CARD |
R12723 | T16875 | T16874 | nummod | 6517,LMBP |
R12724 | T16876 | T16872 | punct | ),pCAGGS-E-RIG-I-CARD |
R12725 | T16877 | T16872 | punct | ",",pCAGGS-E-RIG-I-CARD |
R12726 | T16878 | T16872 | conj | pEF-HA-IRF-7,pCAGGS-E-RIG-I-CARD |
R12727 | T16879 | T16881 | punct | (,provided |
R12728 | T16880 | T16881 | advmod | kindly,provided |
R12729 | T16881 | T16868 | parataxis | provided,LMBP |
R12730 | T16882 | T16881 | agent | by,provided |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17110 | 105-115 | Gene_expression | denotes | expression |
T17109 | 105-115 | Gene_expression | denotes | expression |
T17108 | 105-115 | Gene_expression | denotes | expression |
T17107 | 105-115 | Gene_expression | denotes | expression |
T17106 | 105-115 | Gene_expression | denotes | expression |
T17105 | 105-115 | Gene_expression | denotes | expression |
T17104 | 105-115 | Gene_expression | denotes | expression |
T17103 | 105-115 | Gene_expression | denotes | expression |
T17102 | 105-115 | Gene_expression | denotes | expression |
T17093 | 185-197 | Protein | denotes | pEF-HA-IRF-7 |
R12929 | T17093 | T17102 | themeOf | pEF-HA-IRF-7,expression |