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PMC:3291650 / 36231-36451 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16630 218-220 NNP denotes T.
T16629 215-217 IN denotes by
T16628 206-214 VB denotes provided
T16627 199-205 RB denotes kindly
T16626 198-199 -LRB- denotes (
T16625 185-197 NN denotes pEF-HA-IRF-7
T16624 183-184 -COMMA- denotes ,
T16623 182-183 -RRB- denotes )
T16622 178-182 CD denotes 6517
T16621 173-177 NN denotes LMBP
T16620 172-173 -LRB- denotes (
T16619 152-171 NN denotes pCAGGS-E-RIG-I-CARD
T16618 150-151 -COMMA- denotes ,
T16617 149-150 -RRB- denotes )
T16616 145-149 CD denotes 3778
T16615 140-144 NN denotes LMBP
T16614 139-140 -LRB- denotes (
T16613 125-138 NN denotes pCAGGS-E-hA20
T16612 124-125 -LRB- denotes (
T16611 116-123 NN denotes vectors
T16610 105-115 NN denotes expression
T16609 96-104 JJ denotes specific
T16608 91-95 IN denotes with
T16607 84-90 NN denotes method
T16606 71-83 NN denotes transfection
T16605 59-70 VB denotes precipitate
T16604 49-58 NN denotes phosphate
T16603 41-48 NN denotes calcium
T16602 37-40 DT denotes the
T16601 31-36 VB denotes using
T16600 19-30 VB denotes transfected
T16599 14-18 VB denotes were
T16598 8-13 NN denotes cells
T16597 0-7 NN denotes HEK293T
R12454 T16598 T16597 arg1Of cells,HEK293T
R12455 T16598 T16599 arg1Of cells,were
R12456 T16598 T16600 arg2Of cells,transfected
R12457 T16600 T16599 arg2Of transfected,were
R12458 T16600 T16601 modOf transfected,using
R12459 T16604 T16601 arg2Of phosphate,using
R12460 T16604 T16602 arg1Of phosphate,the
R12461 T16604 T16603 arg1Of phosphate,calcium
R12462 T16607 T16605 arg2Of method,precipitate
R12463 T16607 T16606 arg1Of method,transfection
R12464 T16607 T16608 arg1Of method,with
R12465 T16611 T16608 arg2Of vectors,with
R12466 T16611 T16609 arg1Of vectors,specific
R12467 T16611 T16610 arg1Of vectors,expression
R12468 T16613 T16614 arg1Of pCAGGS-E-hA20,(
R12469 T16613 T16618 arg1Of pCAGGS-E-hA20,","
R12470 T16615 T16614 arg2Of LMBP,(
R12471 T16615 T16616 arg1Of LMBP,3778
R12472 T16617 T16614 arg3Of ),(
R12473 T16618 T16624 arg1Of ",",","
R12474 T16619 T16618 arg2Of pCAGGS-E-RIG-I-CARD,","
R12475 T16619 T16620 arg1Of pCAGGS-E-RIG-I-CARD,(
R12476 T16621 T16620 arg2Of LMBP,(
R12477 T16621 T16622 arg1Of LMBP,6517
R12478 T16623 T16620 arg3Of ),(
R12479 T16624 T16612 arg2Of ",",(
R12480 T16625 T16624 arg2Of pEF-HA-IRF-7,","
R12481 T16628 T16627 arg1Of provided,kindly

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17077 192-197 http://www.uniprot.org/uniprot/Q92985 denotes IRF-7

GO-CC

Id Subject Object Predicate Lexical cue
T16561 8-13 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T232 0-220 Sentence denotes HEK293T cells were transfected using the calcium phosphate precipitate transfection method with specific expression vectors (pCAGGS-E-hA20 (LMBP 3778), pCAGGS-E-RIG-I-CARD (LMBP 6517), pEF-HA-IRF-7 (kindly provided by T.

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17134 105-115 Gene_expression denotes expression

DLUT931

Id Subject Object Predicate Lexical cue
T17088 105-115 Gene_expression denotes expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17148 37-58 Entity denotes the calcium phosphate

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16883 218-220 NNP denotes T.
T16882 215-217 IN denotes by
T16881 206-214 VBN denotes provided
T16880 199-205 RB denotes kindly
T16879 198-199 -LRB- denotes (
T16878 185-197 NNP denotes pEF-HA-IRF-7
T16877 183-184 , denotes ,
T16876 182-183 -RRB- denotes )
T16875 178-182 CD denotes 6517
T16874 173-177 NNP denotes LMBP
T16873 172-173 -LRB- denotes (
T16872 152-171 NNP denotes pCAGGS-E-RIG-I-CARD
T16871 150-151 , denotes ,
T16870 149-150 -RRB- denotes )
T16869 145-149 CD denotes 3778
T16868 140-144 NNP denotes LMBP
T16867 139-140 -LRB- denotes (
T16866 125-138 NN denotes pCAGGS-E-hA20
T16865 124-125 -LRB- denotes (
T16864 116-123 NNS denotes vectors
T16863 105-115 NN denotes expression
T16862 96-104 JJ denotes specific
T16861 91-95 IN denotes with
T16860 84-90 NN denotes method
T16859 71-83 NN denotes transfection
T16858 59-70 NN denotes precipitate
T16857 49-58 NN denotes phosphate
T16856 41-48 NN denotes calcium
T16855 37-40 DT denotes the
T16854 31-36 VBG denotes using
T16853 19-30 VBN denotes transfected
T16852 14-18 VBD denotes were
T16851 8-13 NNS denotes cells
T16850 0-7 CD denotes HEK293T
R12698 T16850 T16851 nummod HEK293T,cells
R12699 T16851 T16853 nsubjpass cells,transfected
R12700 T16852 T16853 auxpass were,transfected
R12701 T16853 T16853 ROOT transfected,transfected
R12702 T16854 T16853 advcl using,transfected
R12703 T16855 T16860 det the,method
R12704 T16856 T16858 nsubj calcium,precipitate
R12705 T16857 T16858 compound phosphate,precipitate
R12706 T16858 T16860 compound precipitate,method
R12707 T16859 T16860 compound transfection,method
R12708 T16860 T16854 dobj method,using
R12709 T16861 T16854 prep with,using
R12710 T16862 T16864 amod specific,vectors
R12711 T16863 T16864 compound expression,vectors
R12712 T16864 T16861 pobj vectors,with
R12713 T16865 T16866 punct (,pCAGGS-E-hA20
R12714 T16866 T16864 appos pCAGGS-E-hA20,vectors
R12715 T16867 T16868 punct (,LMBP
R12716 T16868 T16866 dep LMBP,pCAGGS-E-hA20
R12717 T16869 T16868 nummod 3778,LMBP
R12718 T16870 T16868 punct ),LMBP
R12719 T16871 T16868 punct ",",LMBP
R12720 T16872 T16868 conj pCAGGS-E-RIG-I-CARD,LMBP
R12721 T16873 T16872 punct (,pCAGGS-E-RIG-I-CARD
R12722 T16874 T16872 appos LMBP,pCAGGS-E-RIG-I-CARD
R12723 T16875 T16874 nummod 6517,LMBP
R12724 T16876 T16872 punct ),pCAGGS-E-RIG-I-CARD
R12725 T16877 T16872 punct ",",pCAGGS-E-RIG-I-CARD
R12726 T16878 T16872 conj pEF-HA-IRF-7,pCAGGS-E-RIG-I-CARD
R12727 T16879 T16881 punct (,provided
R12728 T16880 T16881 advmod kindly,provided
R12729 T16881 T16868 parataxis provided,LMBP
R12730 T16882 T16881 agent by,provided

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T17110 105-115 Gene_expression denotes expression
T17109 105-115 Gene_expression denotes expression
T17108 105-115 Gene_expression denotes expression
T17107 105-115 Gene_expression denotes expression
T17106 105-115 Gene_expression denotes expression
T17105 105-115 Gene_expression denotes expression
T17104 105-115 Gene_expression denotes expression
T17103 105-115 Gene_expression denotes expression
T17102 105-115 Gene_expression denotes expression
T17093 185-197 Protein denotes pEF-HA-IRF-7
R12929 T17093 T17102 themeOf pEF-HA-IRF-7,expression