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PMC:3291650 / 35445-35605 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T16102 37-40 Protein denotes CD8
T16101 26-36 Gene_expression denotes expressing
T16100 12-15 Protein denotes GrB
T16099 0-10 Protein denotes Granzyme B
T16093 37-40 Protein denotes CD8
T16092 12-15 Protein denotes GrB
T16091 0-10 Protein denotes Granzyme B
R12121 T16099 T16101 themeOf Granzyme B,expressing
R12122 T16100 T16099 equivalentTo GrB,Granzyme B

2_test

Id Subject Object Predicate Lexical cue
22396652-21187318-98461893 156-158 21187318 denotes 86

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16189 158-159 -RRB- denotes ]
T16188 156-158 CD denotes 86
T16187 155-156 -LRB- denotes [
T16186 145-154 VB denotes described
T16185 134-144 RB denotes previously
T16184 131-133 IN denotes as
T16183 129-130 -RRB- denotes )
T16182 124-129 NN denotes Sigma
T16181 123-124 -LRB- denotes (
T16180 121-122 NN denotes A
T16179 111-120 NN denotes Brefeldin
T16178 108-110 NN denotes µg
T16177 105-107 CD denotes 50
T16176 100-104 IN denotes with
T16175 87-99 RB denotes intranasally
T16174 82-86 NN denotes mice
T16173 78-81 DT denotes the
T16172 69-77 VB denotes treating
T16171 66-68 IN denotes by
T16170 55-65 VB denotes determined
T16169 50-54 VB denotes were
T16168 44-49 NN denotes cells
T16167 42-43 NN denotes T
T16166 37-41 JJ denotes CD8+
T16165 26-36 VB denotes expressing
T16164 21-25 NN denotes IFNγ
T16163 17-20 CC denotes and
T16162 15-16 -RRB- denotes )
T16161 12-15 NN denotes GrB
T16160 11-12 -LRB- denotes (
T16159 9-10 NN denotes B
T16158 0-8 NN denotes Granzyme
R12141 T16159 T16158 arg1Of B,Granzyme
R12142 T16159 T16160 arg1Of B,(
R12143 T16159 T16163 arg1Of B,and
R12144 T16161 T16160 arg2Of GrB,(
R12145 T16162 T16160 arg3Of ),(
R12146 T16163 T16169 arg1Of and,were
R12147 T16163 T16170 arg2Of and,determined
R12148 T16164 T16163 arg2Of IFNγ,and
R12149 T16164 T16165 arg1Of IFNγ,expressing
R12150 T16168 T16165 arg2Of cells,expressing
R12151 T16168 T16166 arg1Of cells,CD8+
R12152 T16168 T16167 arg1Of cells,T
R12153 T16170 T16169 arg2Of determined,were
R12154 T16170 T16171 arg1Of determined,by
R12155 T16172 T16171 arg2Of treating,by
R12156 T16172 T16175 arg1Of treating,intranasally
R12157 T16172 T16176 arg1Of treating,with
R12158 T16174 T16172 arg2Of mice,treating
R12159 T16174 T16173 arg1Of mice,the
R12160 T16180 T16176 arg2Of A,with
R12161 T16180 T16177 arg1Of A,50
R12162 T16180 T16178 arg1Of A,µg
R12163 T16180 T16179 arg1Of A,Brefeldin
R12164 T16180 T16181 arg1Of A,(
R12165 T16180 T16184 arg1Of A,as
R12166 T16182 T16181 arg2Of Sigma,(
R12167 T16183 T16181 arg3Of ),(
R12168 T16186 T16185 arg1Of described,previously
R12169 T16188 T16184 arg2Of 86,as
R12170 T16188 T16186 arg1Of 86,described
R12171 T16188 T16187 arg2Of 86,[
R12172 T16189 T16187 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T16129 37-40 Protein denotes CD8
T16128 12-15 Protein denotes GrB
T16127 0-10 Protein denotes Granzyme B

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T16410 37-40 http://www.uniprot.org/uniprot/P10966 denotes CD8
T16406 37-40 http://www.uniprot.org/uniprot/P01732 denotes CD8

GO-CC

Id Subject Object Predicate Lexical cue
T16135 44-49 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T16110 0-160 Sentence denotes Granzyme B (GrB) and IFNγ expressing CD8+ T cells were determined by treating the mice intranasally with 50 µg Brefeldin A (Sigma) as previously described [86].
T225 0-160 Sentence denotes Granzyme B (GrB) and IFNγ expressing CD8+ T cells were determined by treating the mice intranasally with 50 µg Brefeldin A (Sigma) as previously described [86].

simple1

Id Subject Object Predicate Lexical cue
T16142 37-40 Protein denotes CD8
T16141 12-15 Protein denotes GrB
T16140 0-10 Protein denotes Granzyme B

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16501 26-36 Gene_expression denotes expressing
T16497 37-40 Protein denotes CD8
T16496 12-15 Protein denotes GrB
T16495 0-10 Protein denotes Granzyme B
R12418 T16495 T16501 themeOf Granzyme B,expressing
R12419 T16496 T16501 themeOf GrB,expressing
R12420 T16497 T16501 themeOf CD8,expressing

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16433 26-36 Gene_expression denotes expressing
T16429 37-40 Protein denotes CD8
T16428 12-15 Protein denotes GrB
T16427 0-10 Protein denotes Granzyme B
R12396 T16427 T16433 themeOf Granzyme B,expressing
R12397 T16428 T16433 themeOf GrB,expressing

DLUT931

Id Subject Object Predicate Lexical cue
T16443 26-36 Gene_expression denotes expressing
T16439 37-40 Protein denotes CD8
T16438 12-15 Protein denotes GrB
T16437 0-10 Protein denotes Granzyme B
R12399 T16437 T16443 themeOf Granzyme B,expressing
R12400 T16438 T16443 themeOf GrB,expressing

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16523 69-99 Regulation denotes treating the mice intranasally
T16516 78-86 Protein denotes the mice
T16513 124-129 Protein denotes Sigma
T16509 12-15 Protein denotes GrB
T16508 21-25 Protein denotes IFNγ
T16507 21-49 Entity denotes IFNγ expressing CD8+ T cells
T16504 105-130 Entity denotes 50 µg Brefeldin A (Sigma)
T16503 0-8 Protein denotes Granzyme
R12423 T16516 T16523 themeOf the mice,treating the mice intranasally

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16316 159-160 . denotes .
T16315 158-159 NNP denotes ]
T16314 156-158 CD denotes 86
T16313 155-156 NNP denotes [
T16312 145-154 VBN denotes described
T16311 134-144 RB denotes previously
T16310 131-133 IN denotes as
T16309 129-130 -RRB- denotes )
T16308 124-129 NNP denotes Sigma
T16307 123-124 -LRB- denotes (
T16306 121-122 NNP denotes A
T16305 111-120 NNP denotes Brefeldin
T16304 108-110 NN denotes µg
T16303 105-107 CD denotes 50
T16302 100-104 IN denotes with
T16301 87-99 RB denotes intranasally
T16300 82-86 NNS denotes mice
T16299 78-81 DT denotes the
T16298 69-77 VBG denotes treating
T16297 66-68 IN denotes by
T16296 55-65 VBN denotes determined
T16295 50-54 VBD denotes were
T16294 44-49 NNS denotes cells
T16293 42-43 NNP denotes T
T16292 40-41 CD denotes +
T16291 37-40 CD denotes CD8
T16290 26-36 VBG denotes expressing
T16289 21-25 NNP denotes IFNγ
T16288 17-20 CC denotes and
T16287 15-16 -RRB- denotes )
T16286 12-15 NNP denotes GrB
T16285 11-12 -LRB- denotes (
T16284 9-10 NNP denotes B
T16283 0-8 NNP denotes Granzyme
R12274 T16283 T16284 compound Granzyme,B
R12275 T16284 T16290 nsubj B,expressing
R12276 T16285 T16284 punct (,B
R12277 T16286 T16284 appos GrB,B
R12278 T16287 T16284 punct ),B
R12279 T16288 T16284 cc and,B
R12280 T16289 T16284 conj IFNγ,B
R12281 T16290 T16296 csubjpass expressing,determined
R12282 T16291 T16294 nummod CD8,cells
R12283 T16292 T16294 nummod +,cells
R12284 T16293 T16294 compound T,cells
R12285 T16294 T16290 dobj cells,expressing
R12286 T16295 T16296 auxpass were,determined
R12287 T16296 T16296 ROOT determined,determined
R12288 T16297 T16296 prep by,determined
R12289 T16298 T16297 pcomp treating,by
R12290 T16299 T16300 det the,mice
R12291 T16300 T16298 dobj mice,treating
R12292 T16301 T16298 advmod intranasally,treating
R12293 T16302 T16298 prep with,treating
R12294 T16303 T16304 nummod 50,µg
R12295 T16304 T16306 compound µg,A
R12296 T16305 T16306 compound Brefeldin,A
R12297 T16306 T16302 pobj A,with
R12298 T16307 T16306 punct (,A
R12299 T16308 T16306 appos Sigma,A
R12300 T16309 T16306 punct ),A
R12301 T16310 T16312 mark as,described
R12302 T16311 T16312 advmod previously,described
R12303 T16312 T16298 advcl described,treating
R12304 T16313 T16315 nmod [,]
R12305 T16314 T16315 nummod 86,]
R12306 T16315 T16312 dobj ],described
R12307 T16316 T16296 punct .,determined

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T16458 26-36 Gene_expression denotes expressing
T16457 26-36 Gene_expression denotes expressing
T16456 26-36 Gene_expression denotes expressing
T16455 124-129 Protein denotes Sigma
T16454 111-122 Protein denotes Brefeldin A
T16453 37-41 Protein denotes CD8+
T16452 21-25 Protein denotes IFNγ
T16451 12-15 Protein denotes GrB
T16450 0-10 Protein denotes Granzyme B
R12405 T16450 T16456 themeOf Granzyme B,expressing
R12406 T16451 T16457 themeOf GrB,expressing
R12407 T16452 T16458 themeOf IFNγ,expressing

testone

Id Subject Object Predicate Lexical cue
T16087 26-36 Gene_expression denotes expressing
T16083 37-40 Protein denotes CD8
T16082 12-15 Protein denotes GrB
T16081 0-10 Protein denotes Granzyme B
R12117 T16081 T16087 themeOf Granzyme B,expressing
R12118 T16082 T16081 equivalentTo GrB,Granzyme B