
PMC:3291650 / 28302-28447
Annnotations
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11661 | 90-95 | Protein | denotes | RIG-I |
T11660 | 64-74 | Positive_regulation | denotes | activation |
T11659 | 59-63 | Protein | denotes | IRF3 |
T11658 | 40-48 | Positive_regulation | denotes | enhanced |
T11657 | 17-26 | Negative_regulation | denotes | deficient |
T11622 | 90-95 | Protein | denotes | RIG-I |
T11621 | 59-63 | Protein | denotes | IRF3 |
R8472 | T11657 | T11658 | causeOf | deficient,enhanced |
R8473 | T11659 | T11660 | themeOf | IRF3,activation |
R8474 | T11660 | T11658 | themeOf | activation,enhanced |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12500 | 141-144 | NN | denotes | RNA |
T12499 | 132-140 | JJ | denotes | stranded |
T12498 | 125-131 | JJ | denotes | double |
T12497 | 121-124 | NN | denotes | LMW |
T12496 | 111-120 | JJ | denotes | synthetic |
T12495 | 108-110 | IN | denotes | by |
T12494 | 96-107 | NN | denotes | stimulation |
T12493 | 90-95 | NN | denotes | RIG-I |
T12492 | 87-89 | TO | denotes | to |
T12491 | 78-86 | NN | denotes | response |
T12490 | 75-77 | IN | denotes | in |
T12489 | 64-74 | NN | denotes | activation |
T12488 | 59-63 | NN | denotes | IRF3 |
T12487 | 55-58 | CC | denotes | and |
T12486 | 49-54 | NN | denotes | NF-κB |
T12485 | 40-48 | VB | denotes | enhanced |
T12484 | 32-39 | NN | denotes | display |
T12483 | 27-31 | NN | denotes | BMDM |
T12482 | 17-26 | JJ | denotes | deficient |
T12481 | 13-16 | NN | denotes | A20 |
T12480 | 8-12 | IN | denotes | that |
T12479 | 3-7 | VB | denotes | show |
T12478 | 0-2 | PRP | denotes | We |
R9019 | T12478 | T12479 | arg1Of | We,show |
R9020 | T12484 | T12481 | arg1Of | display,A20 |
R9021 | T12484 | T12482 | arg1Of | display,deficient |
R9022 | T12484 | T12483 | arg1Of | display,BMDM |
R9023 | T12484 | T12485 | arg1Of | display,enhanced |
R9024 | T12485 | T12479 | arg2Of | enhanced,show |
R9025 | T12485 | T12480 | arg1Of | enhanced,that |
R9026 | T12486 | T12487 | arg1Of | NF-κB,and |
R9027 | T12488 | T12487 | arg2Of | IRF3,and |
R9028 | T12489 | T12485 | arg2Of | activation,enhanced |
R9029 | T12489 | T12486 | arg1Of | activation,NF-κB |
R9030 | T12489 | T12488 | arg1Of | activation,IRF3 |
R9031 | T12489 | T12490 | arg1Of | activation,in |
R9032 | T12489 | T12495 | arg1Of | activation,by |
R9033 | T12490 | T12492 | arg1Of | in,to |
R9034 | T12491 | T12490 | arg2Of | response,in |
R9035 | T12494 | T12490 | arg3Of | stimulation,in |
R9036 | T12494 | T12493 | arg1Of | stimulation,RIG-I |
R9037 | T12498 | T12496 | arg1Of | double,synthetic |
R9038 | T12498 | T12497 | arg1Of | double,LMW |
R9039 | T12500 | T12495 | arg2Of | RNA,by |
R9040 | T12500 | T12498 | arg1Of | RNA,double |
R9041 | T12500 | T12499 | arg1Of | RNA,stranded |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11823 | 90-95 | Protein | denotes | RIG-I |
T11822 | 59-63 | Protein | denotes | IRF3 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14285 | 59-63 | http://www.uniprot.org/uniprot/Q14653 | denotes | IRF3 |
T14264 | 13-16 | http://www.uniprot.org/uniprot/P21580 | denotes | A20 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11718 | 0-145 | Sentence | denotes | We show that A20 deficient BMDM display enhanced NF-κB and IRF3 activation in response to RIG-I stimulation by synthetic LMW double stranded RNA. |
T172 | 0-145 | Sentence | denotes | We show that A20 deficient BMDM display enhanced NF-κB and IRF3 activation in response to RIG-I stimulation by synthetic LMW double stranded RNA. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11977 | 90-95 | Protein | denotes | RIG-I |
T11976 | 59-63 | Protein | denotes | IRF3 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14591 | 64-74 | Positive_regulation | denotes | activation |
T14590 | 40-48 | Positive_regulation | denotes | enhanced |
T14564 | 90-95 | Protein | denotes | RIG-I |
T14563 | 59-63 | Protein | denotes | IRF3 |
R10918 | T14563 | T14591 | themeOf | IRF3,activation |
R10927 | T14591 | T14590 | themeOf | activation,enhanced |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14330 | 40-48 | Positive_regulation | denotes | enhanced |
T14329 | 64-74 | Positive_regulation | denotes | activation |
T14304 | 90-95 | Protein | denotes | RIG-I |
T14303 | 59-63 | Protein | denotes | IRF3 |
R10827 | T14303 | T14329 | themeOf | IRF3,activation |
R10830 | T14329 | T14330 | themeOf | activation,enhanced |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14372 | 78-86 | Positive_regulation | denotes | response |
T14371 | 40-48 | Positive_regulation | denotes | enhanced |
T14370 | 96-107 | Positive_regulation | denotes | stimulation |
T14369 | 64-74 | Positive_regulation | denotes | activation |
T14345 | 90-95 | Protein | denotes | RIG-I |
T14344 | 59-63 | Protein | denotes | IRF3 |
R10847 | T14344 | T14369 | themeOf | IRF3,activation |
R10848 | T14369 | T14371 | themeOf | activation,enhanced |
R10849 | T14345 | T14370 | themeOf | RIG-I,stimulation |
R10851 | T14370 | T14372 | themeOf | stimulation,response |
R10852 | T14372 | T14370 | themeOf | response,stimulation |
R10853 | T14372 | T14371 | themeOf | response,enhanced |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14741 | 59-74 | Positive_regulation | denotes | IRF3 activation |
T14733 | 90-107 | Positive_regulation | denotes | RIG-I stimulation |
T14721 | 49-54 | Protein | denotes | NF-κB |
T14697 | 90-95 | Protein | denotes | RIG-I |
T14670 | 8-16 | Protein | denotes | that A20 |
T14621 | 59-63 | Protein | denotes | IRF3 |
R10930 | T14621 | T14741 | themeOf | IRF3,IRF3 activation |
R10947 | T14697 | T14733 | themeOf | RIG-I,RIG-I stimulation |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13629 | 144-145 | . | denotes | . |
T13628 | 141-144 | NNP | denotes | RNA |
T13627 | 132-140 | VBD | denotes | stranded |
T13626 | 125-131 | JJ | denotes | double |
T13625 | 121-124 | NNP | denotes | LMW |
T13624 | 111-120 | JJ | denotes | synthetic |
T13623 | 108-110 | IN | denotes | by |
T13622 | 96-107 | NN | denotes | stimulation |
T13621 | 90-95 | NNP | denotes | RIG-I |
T13620 | 87-89 | TO | denotes | to |
T13619 | 78-86 | NN | denotes | response |
T13618 | 75-77 | IN | denotes | in |
T13617 | 64-74 | NN | denotes | activation |
T13616 | 59-63 | NNP | denotes | IRF3 |
T13615 | 55-58 | CC | denotes | and |
T13614 | 49-54 | NNP | denotes | NF-κB |
T13613 | 40-48 | VBN | denotes | enhanced |
T13612 | 32-39 | NN | denotes | display |
T13611 | 27-31 | NNP | denotes | BMDM |
T13610 | 17-26 | JJ | denotes | deficient |
T13609 | 13-16 | CD | denotes | A20 |
T13608 | 8-12 | IN | denotes | that |
T13607 | 3-7 | VBP | denotes | show |
T13606 | 0-2 | PRP | denotes | We |
R10169 | T13606 | T13607 | nsubj | We,show |
R10170 | T13607 | T13607 | ROOT | show,show |
R10171 | T13608 | T13613 | mark | that,enhanced |
R10172 | T13609 | T13612 | nummod | A20,display |
R10173 | T13610 | T13612 | amod | deficient,display |
R10174 | T13611 | T13612 | compound | BMDM,display |
R10175 | T13612 | T13613 | nsubj | display,enhanced |
R10176 | T13613 | T13607 | ccomp | enhanced,show |
R10177 | T13614 | T13613 | dobj | NF-κB,enhanced |
R10178 | T13615 | T13614 | cc | and,NF-κB |
R10179 | T13616 | T13614 | conj | IRF3,NF-κB |
R10180 | T13617 | T13627 | nsubj | activation,stranded |
R10181 | T13618 | T13617 | prep | in,activation |
R10182 | T13619 | T13618 | pobj | response,in |
R10183 | T13620 | T13619 | prep | to,response |
R10184 | T13621 | T13622 | compound | RIG-I,stimulation |
R10185 | T13622 | T13620 | pobj | stimulation,to |
R10186 | T13623 | T13622 | prep | by,stimulation |
R10187 | T13624 | T13626 | amod | synthetic,double |
R10188 | T13625 | T13626 | compound | LMW,double |
R10189 | T13626 | T13623 | pobj | double,by |
R10190 | T13627 | T13613 | conj | stranded,enhanced |
R10191 | T13628 | T13627 | dobj | RNA,stranded |
R10192 | T13629 | T13607 | punct | .,show |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14445 | 40-48 | Positive_regulation | denotes | enhanced |
T14444 | 40-48 | Positive_regulation | denotes | enhanced |
T14443 | 64-74 | Positive_regulation | denotes | activation |
T14442 | 64-74 | Positive_regulation | denotes | activation |
T14441 | 90-95 | Protein | denotes | RIG-I |
T14440 | 59-63 | Protein | denotes | IRF3 |
T14439 | 49-54 | Protein | denotes | NF-κB |
R10876 | T14439 | T14442 | themeOf | NF-κB,activation |
R10877 | T14440 | T14443 | themeOf | IRF3,activation |
R10878 | T14442 | T14444 | themeOf | activation,enhanced |
R10879 | T14443 | T14445 | themeOf | activation,enhanced |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11603 | 17-26 | Negative_regulation | denotes | deficient |
T11575 | 90-95 | Protein | denotes | RIG-I |
T11574 | 59-63 | Protein | denotes | IRF3 |