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PMC:3291650 / 26559-26815 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T11649 191-196 Protein denotes IL-1β
T11648 183-186 Protein denotes TNF
T11647 177-181 Protein denotes IL-6
T11646 125-130 Protein denotes MIP-2
T11645 118-120 Protein denotes KC
T11618 191-196 Protein denotes IL-1β
T11617 183-186 Protein denotes TNF
T11616 177-181 Protein denotes IL-6
T11615 125-130 Protein denotes MIP-2
T11614 118-120 Protein denotes KC

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12235 251-255 NN denotes mice
T12234 246-250 NN denotes type
T12233 241-245 JJ denotes wild
T12232 238-240 TO denotes to
T12231 229-237 VB denotes compared
T12230 224-228 NN denotes mice
T12229 213-223 NN denotes A20myel-KO
T12228 210-212 IN denotes of
T12227 204-209 NN denotes lungs
T12226 200-203 DT denotes the
T12225 197-199 IN denotes in
T12224 191-196 NN denotes IL-1β
T12223 187-190 CC denotes and
T12222 183-186 NN denotes TNF
T12221 181-182 -COMMA- denotes ,
T12220 177-181 NN denotes IL-6
T12219 174-176 IN denotes as
T12218 169-173 JJ denotes such
T12217 159-168 NN denotes cytokines
T12216 143-158 JJ denotes proinflammatory
T12215 135-142 JJ denotes several
T12214 131-134 CC denotes and
T12213 125-130 NN denotes MIP-2
T12212 121-124 CC denotes and
T12211 118-120 NN denotes KC
T12210 115-117 IN denotes as
T12209 110-114 JJ denotes such
T12208 99-109 NN denotes chemokines
T12207 88-98 VB denotes attracting
T12206 77-87 NN denotes neutrophil
T12205 67-76 RB denotes primarily
T12204 64-66 IN denotes of
T12203 57-63 NN denotes levels
T12202 50-56 JJ denotes higher
T12201 47-49 IN denotes in
T12200 38-46 VB denotes resulted
T12199 34-37 NN denotes IAV
T12198 29-33 IN denotes with
T12197 19-28 NN denotes infection
T12196 14-18 FW denotes vivo
T12195 11-13 FW denotes in
T12194 9-10 -COMMA- denotes ,
T12193 0-9 RB denotes Similarly
R8727 T12196 T12195 arg1Of vivo,in
R8728 T12197 T12196 arg1Of infection,vivo
R8729 T12197 T12198 arg1Of infection,with
R8730 T12197 T12200 arg1Of infection,resulted
R8731 T12199 T12198 arg2Of IAV,with
R8732 T12200 T12193 arg1Of resulted,Similarly
R8733 T12200 T12194 arg1Of resulted,","
R8734 T12200 T12201 arg1Of resulted,in
R8735 T12203 T12201 arg2Of levels,in
R8736 T12203 T12202 arg1Of levels,higher
R8737 T12203 T12204 arg1Of levels,of
R8738 T12206 T12204 arg2Of neutrophil,of
R8739 T12206 T12205 arg1Of neutrophil,primarily
R8740 T12206 T12207 arg1Of neutrophil,attracting
R8741 T12208 T12207 arg2Of chemokines,attracting
R8742 T12208 T12210 arg1Of chemokines,as
R8743 T12208 T12225 arg1Of chemokines,in
R8744 T12210 T12209 arg1Of as,such
R8745 T12211 T12212 arg1Of KC,and
R8746 T12212 T12214 arg1Of and,and
R8747 T12213 T12212 arg2Of MIP-2,and
R8748 T12214 T12210 arg2Of and,as
R8749 T12217 T12214 arg2Of cytokines,and
R8750 T12217 T12215 arg1Of cytokines,several
R8751 T12217 T12216 arg1Of cytokines,proinflammatory
R8752 T12217 T12219 arg1Of cytokines,as
R8753 T12219 T12218 arg1Of as,such
R8754 T12220 T12221 arg1Of IL-6,","
R8755 T12221 T12223 arg1Of ",",and
R8756 T12222 T12221 arg2Of TNF,","
R8757 T12223 T12219 arg2Of and,as
R8758 T12224 T12223 arg2Of IL-1β,and
R8759 T12227 T12225 arg2Of lungs,in
R8760 T12227 T12226 arg1Of lungs,the
R8761 T12227 T12228 arg1Of lungs,of
R8762 T12230 T12228 arg2Of mice,of
R8763 T12230 T12229 arg1Of mice,A20myel-KO
R8764 T12230 T12231 arg2Of mice,compared
R8765 T12231 T12232 arg1Of compared,to
R8766 T12235 T12232 arg2Of mice,to
R8767 T12235 T12233 arg1Of mice,wild
R8768 T12235 T12234 arg1Of mice,type

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11819 191-196 Protein denotes IL-1β
T11818 183-186 Protein denotes TNF
T11817 177-181 Protein denotes IL-6
T11816 125-130 Protein denotes MIP-2
T11815 118-120 Protein denotes KC

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14284 191-196 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T14282 183-186 http://www.uniprot.org/uniprot/P01375 denotes TNF
T14280 177-181 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T14278 125-130 http://www.uniprot.org/uniprot/P10889 denotes MIP-2

GO-MF

Id Subject Object Predicate Lexical cue
T11910 177-181 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T11710 0-256 Sentence denotes Similarly, in vivo infection with IAV resulted in higher levels of primarily neutrophil attracting chemokines such as KC and MIP-2 and several proinflammatory cytokines such as IL-6, TNF and IL-1β in the lungs of A20myel-KO mice compared to wild type mice.
T164 0-256 Sentence denotes Similarly, in vivo infection with IAV resulted in higher levels of primarily neutrophil attracting chemokines such as KC and MIP-2 and several proinflammatory cytokines such as IL-6, TNF and IL-1β in the lungs of A20myel-KO mice compared to wild type mice.

simple1

Id Subject Object Predicate Lexical cue
T11973 191-196 Protein denotes IL-1β
T11972 183-186 Protein denotes TNF
T11971 177-181 Protein denotes IL-6
T11970 125-130 Protein denotes MIP-2
T11969 118-120 Protein denotes KC

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14587 38-46 Positive_regulation denotes resulted
T14586 57-63 Positive_regulation denotes levels
T14560 191-196 Protein denotes IL-1β
T14559 183-186 Protein denotes TNF
T14558 177-181 Protein denotes IL-6
T14557 125-130 Protein denotes MIP-2
T14556 118-120 Protein denotes KC
R10911 T14556 T14587 themeOf KC,resulted
R10913 T14556 T14586 themeOf KC,levels
R10914 T14557 T14586 themeOf MIP-2,levels

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14326 38-46 Positive_regulation denotes resulted
T14300 191-196 Protein denotes IL-1β
T14299 183-186 Protein denotes TNF
T14298 177-181 Protein denotes IL-6
T14297 125-130 Protein denotes MIP-2
T14296 118-120 Protein denotes KC
R10786 T14296 T14326 themeOf KC,resulted

DLUT931

Id Subject Object Predicate Lexical cue
T14341 191-196 Protein denotes IL-1β
T14340 183-186 Protein denotes TNF
T14339 177-181 Protein denotes IL-6
T14338 125-130 Protein denotes MIP-2
T14337 118-120 Protein denotes KC

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14763 77-130 Binding denotes neutrophil attracting chemokines such as KC and MIP-2
T14762 77-130 Binding denotes neutrophil attracting chemokines such as KC and MIP-2
T14758 191-255 Localization denotes IL-1β in the lungs of A20myel-KO mice compared to wild type mice
T14678 191-255 Protein denotes IL-1β in the lungs of A20myel-KO mice compared to wild type mice
T14661 99-120 Protein denotes chemokines such as KC
T14656 135-181 Protein denotes several proinflammatory cytokines such as IL-6
T14654 135-176 Protein denotes several proinflammatory cytokines such as
T14649 99-117 Protein denotes chemokines such as
T14648 238-255 Protein denotes to wild type mice
T14644 77-130 Entity denotes neutrophil attracting chemokines such as KC and MIP-2
T14617 210-228 Protein denotes of A20myel-KO mice
T14610 183-186 Protein denotes TNF
T14600 125-130 Protein denotes MIP-2
R10922 T14600 T14763 themeOf MIP-2,neutrophil attracting chemokines such as KC and MIP-2
R10935 T14661 T14762 themeOf chemokines such as KC,neutrophil attracting chemokines such as KC and MIP-2
R10942 T14678 T14758 themeOf IL-1β in the lungs of A20myel-KO mice compared to wild type mice,IL-1β in the lungs of A20myel-KO mice compared to wild type mice

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13355 255-256 . denotes .
T13354 251-255 NNS denotes mice
T13353 246-250 NN denotes type
T13352 241-245 JJ denotes wild
T13351 238-240 TO denotes to
T13350 229-237 VBN denotes compared
T13349 224-228 NNS denotes mice
T13348 213-223 JJ denotes A20myel-KO
T13347 210-212 IN denotes of
T13346 204-209 NNS denotes lungs
T13345 200-203 DT denotes the
T13344 197-199 IN denotes in
T13343 191-196 NNP denotes IL-1β
T13342 187-190 CC denotes and
T13341 183-186 NNP denotes TNF
T13340 181-182 , denotes ,
T13339 177-181 NNP denotes IL-6
T13338 174-176 IN denotes as
T13337 169-173 JJ denotes such
T13336 159-168 NNS denotes cytokines
T13335 143-158 JJ denotes proinflammatory
T13334 135-142 JJ denotes several
T13333 131-134 CC denotes and
T13332 125-130 NNP denotes MIP-2
T13331 121-124 CC denotes and
T13330 118-120 NNP denotes KC
T13329 115-117 IN denotes as
T13328 110-114 JJ denotes such
T13327 99-109 NNS denotes chemokines
T13326 88-98 VBG denotes attracting
T13325 77-87 NN denotes neutrophil
T13324 67-76 RB denotes primarily
T13323 64-66 IN denotes of
T13322 57-63 NNS denotes levels
T13321 50-56 JJR denotes higher
T13320 47-49 IN denotes in
T13319 38-46 VBD denotes resulted
T13318 34-37 NNP denotes IAV
T13317 29-33 IN denotes with
T13316 19-28 NN denotes infection
T13315 14-18 NN denotes vivo
T13314 11-13 IN denotes in
T13313 9-10 , denotes ,
T13312 0-9 RB denotes Similarly
R9875 T13312 T13319 advmod Similarly,resulted
R9876 T13313 T13319 punct ",",resulted
R9877 T13314 T13319 prep in,resulted
R9878 T13315 T13316 compound vivo,infection
R9879 T13316 T13319 nsubj infection,resulted
R9880 T13317 T13316 prep with,infection
R9881 T13318 T13317 pobj IAV,with
R9882 T13319 T13319 ROOT resulted,resulted
R9883 T13320 T13319 prep in,resulted
R9884 T13321 T13322 amod higher,levels
R9885 T13322 T13320 pobj levels,in
R9886 T13323 T13322 prep of,levels
R9887 T13324 T13325 advmod primarily,neutrophil
R9888 T13325 T13323 pobj neutrophil,of
R9889 T13326 T13322 acl attracting,levels
R9890 T13327 T13326 dobj chemokines,attracting
R9891 T13328 T13329 amod such,as
R9892 T13329 T13327 prep as,chemokines
R9893 T13330 T13329 pobj KC,as
R9894 T13331 T13330 cc and,KC
R9895 T13332 T13330 conj MIP-2,KC
R9896 T13333 T13332 cc and,MIP-2
R9897 T13334 T13336 amod several,cytokines
R9898 T13335 T13336 amod proinflammatory,cytokines
R9899 T13336 T13332 conj cytokines,MIP-2
R9900 T13337 T13338 amod such,as
R9901 T13338 T13336 prep as,cytokines
R9902 T13339 T13338 pobj IL-6,as
R9903 T13340 T13339 punct ",",IL-6
R9904 T13341 T13339 conj TNF,IL-6
R9905 T13342 T13341 cc and,TNF
R9906 T13343 T13341 conj IL-1β,TNF
R9907 T13344 T13336 prep in,cytokines
R9908 T13345 T13346 det the,lungs
R9909 T13346 T13344 pobj lungs,in
R9910 T13347 T13346 prep of,lungs
R9911 T13348 T13349 amod A20myel-KO,mice
R9912 T13349 T13347 pobj mice,of
R9913 T13350 T13319 prep compared,resulted
R9914 T13351 T13350 prep to,compared
R9915 T13352 T13354 amod wild,mice
R9916 T13353 T13354 compound type,mice
R9917 T13354 T13351 pobj mice,to
R9918 T13355 T13319 punct .,resulted

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14436 191-196 Protein denotes IL-1β
T14435 183-186 Protein denotes TNF
T14434 177-181 Protein denotes IL-6
T14433 125-130 Protein denotes MIP-2
T14432 118-120 Protein denotes KC

testone

Id Subject Object Predicate Lexical cue
T11571 191-196 Protein denotes IL-1β
T11570 183-186 Protein denotes TNF
T11569 177-181 Protein denotes IL-6
T11568 125-130 Protein denotes MIP-2
T11567 118-120 Protein denotes KC