
PMC:3291650 / 23905-24140
Annnotations
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8704 | 138-147 | Positive_regulation | denotes | increased |
T8703 | 82-92 | Binding | denotes | associated |
T8702 | 59-64 | Protein | denotes | IL-1β |
T8701 | 51-54 | Protein | denotes | TNF |
T8700 | 45-49 | Protein | denotes | IL-6 |
T8662 | 59-64 | Protein | denotes | IL-1β |
T8661 | 51-54 | Protein | denotes | TNF |
T8660 | 45-49 | Protein | denotes | IL-6 |
R6113 | T8700 | T8703 | themeOf | IL-6,associated |
R6114 | T8701 | T8703 | themeOf | TNF,associated |
R6115 | T8702 | T8703 | themeOf | IL-1β,associated |
R6116 | T8703 | T8704 | themeOf | associated,increased |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22396652-17213831-98461862 | 128-130 | 17213831 | denotes | 64 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9885 | 55-58 | CC | denotes | and |
T9884 | 51-54 | NN | denotes | TNF |
T9883 | 49-50 | -COMMA- | denotes | , |
T9882 | 45-49 | NN | denotes | IL-6 |
T9881 | 35-44 | NN | denotes | cytokines |
T9880 | 19-34 | JJ | denotes | proinflammatory |
T9879 | 15-18 | DT | denotes | the |
T9878 | 12-14 | IN | denotes | of |
T9877 | 5-11 | NN | denotes | levels |
T9876 | 0-4 | RB | denotes | Also |
T9918 | 233-234 | -RRB- | denotes | ) |
T9917 | 230-233 | NN | denotes | S3A |
T9916 | 223-229 | NN | denotes | figure |
T9915 | 219-222 | CC | denotes | and |
T9914 | 216-218 | NN | denotes | 4C |
T9913 | 209-215 | NN | denotes | figure |
T9912 | 208-209 | -LRB- | denotes | ( |
T9911 | 200-207 | NN | denotes | animals |
T9910 | 192-199 | NN | denotes | control |
T9909 | 189-191 | TO | denotes | to |
T9908 | 180-188 | VB | denotes | compared |
T9907 | 175-179 | NN | denotes | mice |
T9906 | 164-174 | NN | denotes | A20myel-KO |
T9905 | 161-163 | IN | denotes | of |
T9904 | 155-160 | NN | denotes | lungs |
T9903 | 151-154 | DT | denotes | the |
T9902 | 148-150 | IN | denotes | in |
T9901 | 138-147 | VB | denotes | increased |
T9900 | 133-137 | VB | denotes | were |
T9899 | 131-132 | -COMMA- | denotes | , |
T9898 | 130-131 | -RRB- | denotes | ] |
T9897 | 128-130 | CD | denotes | 64 |
T9896 | 127-128 | -LRB- | denotes | [ |
T9895 | 120-126 | NN | denotes | humans |
T9894 | 117-119 | IN | denotes | in |
T9893 | 98-116 | NN | denotes | immunopathogenesis |
T9892 | 93-97 | IN | denotes | with |
T9891 | 82-92 | VB | denotes | associated |
T9890 | 76-81 | RB | denotes | often |
T9889 | 72-75 | VB | denotes | are |
T9888 | 66-71 | WDT | denotes | which |
T9887 | 64-65 | -COMMA- | denotes | , |
T9886 | 59-64 | NN | denotes | IL-1β |
R7121 | T9877 | T9878 | arg1Of | levels,of |
R7122 | T9877 | T9887 | arg1Of | levels,"," |
R7123 | T9877 | T9888 | arg1Of | levels,which |
R7124 | T9877 | T9889 | arg1Of | levels,are |
R7125 | T9877 | T9891 | arg2Of | levels,associated |
R7126 | T9877 | T9900 | arg1Of | levels,were |
R7127 | T9877 | T9901 | arg2Of | levels,increased |
R7128 | T9881 | T9879 | arg1Of | cytokines,the |
R7129 | T9881 | T9880 | arg1Of | cytokines,proinflammatory |
R7130 | T9882 | T9883 | arg1Of | IL-6,"," |
R7131 | T9883 | T9885 | arg1Of | ",",and |
R7132 | T9884 | T9883 | arg2Of | TNF,"," |
R7133 | T9885 | T9878 | arg2Of | and,of |
R7134 | T9885 | T9881 | arg1Of | and,cytokines |
R7135 | T9886 | T9885 | arg2Of | IL-1β,and |
R7136 | T9891 | T9889 | arg2Of | associated,are |
R7137 | T9891 | T9890 | arg1Of | associated,often |
R7138 | T9891 | T9892 | arg1Of | associated,with |
R7139 | T9893 | T9892 | arg2Of | immunopathogenesis,with |
R7140 | T9893 | T9894 | arg1Of | immunopathogenesis,in |
R7141 | T9895 | T9894 | arg2Of | humans,in |
R7142 | T9895 | T9896 | arg1Of | humans,[ |
R7143 | T9897 | T9896 | arg2Of | 64,[ |
R7144 | T9898 | T9896 | arg3Of | ],[ |
R7145 | T9901 | T9876 | arg1Of | increased,Also |
R7146 | T9901 | T9899 | arg1Of | increased,"," |
R7147 | T9901 | T9900 | arg2Of | increased,were |
R7148 | T9901 | T9902 | arg1Of | increased,in |
R7149 | T9901 | T9908 | arg1Of | increased,compared |
R7150 | T9904 | T9902 | arg2Of | lungs,in |
R7151 | T9904 | T9903 | arg1Of | lungs,the |
R7152 | T9904 | T9905 | arg1Of | lungs,of |
R7153 | T9907 | T9905 | arg2Of | mice,of |
R7154 | T9907 | T9906 | arg1Of | mice,A20myel-KO |
R7155 | T9909 | T9908 | arg2Of | to,compared |
R7156 | T9911 | T9909 | arg2Of | animals,to |
R7157 | T9911 | T9910 | arg1Of | animals,control |
R7158 | T9911 | T9912 | arg1Of | animals,( |
R7159 | T9914 | T9913 | arg1Of | 4C,figure |
R7160 | T9914 | T9915 | arg1Of | 4C,and |
R7161 | T9915 | T9912 | arg2Of | and,( |
R7162 | T9917 | T9915 | arg2Of | S3A,and |
R7163 | T9917 | T9916 | arg1Of | S3A,figure |
R7164 | T9918 | T9912 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8812 | 59-64 | Protein | denotes | IL-1β |
T8811 | 51-54 | Protein | denotes | TNF |
T8810 | 45-49 | Protein | denotes | IL-6 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11143 | 59-64 | http://www.uniprot.org/uniprot/P01584 | denotes | IL-1β |
T11142 | 51-54 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
T11130 | 45-49 | http://www.uniprot.org/uniprot/P05231 | denotes | IL-6 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8716 | 155-160 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lungs |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8856 | 45-49 | http://purl.obolibrary.org/obo/GO_0005138 | denotes | IL-6 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8748 | 0-235 | Sentence | denotes | Also levels of the proinflammatory cytokines IL-6, TNF and IL-1β, which are often associated with immunopathogenesis in humans [64], were increased in the lungs of A20myel-KO mice compared to control animals (figure 4C and figure S3A). |
T146 | 0-235 | Sentence | denotes | Also levels of the proinflammatory cytokines IL-6, TNF and IL-1β, which are often associated with immunopathogenesis in humans [64], were increased in the lungs of A20myel-KO mice compared to control animals (figure 4C and figure S3A). |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8924 | 59-64 | Protein | denotes | IL-1β |
T8923 | 51-54 | Protein | denotes | TNF |
T8922 | 45-49 | Protein | denotes | IL-6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11386 | 138-147 | Positive_regulation | denotes | increased |
T11378 | 59-64 | Protein | denotes | IL-1β |
T11377 | 51-54 | Protein | denotes | TNF |
T11376 | 45-49 | Protein | denotes | IL-6 |
R8450 | T11376 | T11386 | themeOf | IL-6,increased |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11170 | 138-147 | Positive_regulation | denotes | increased |
T11164 | 59-64 | Protein | denotes | IL-1β |
T11163 | 51-54 | Protein | denotes | TNF |
T11162 | 45-49 | Protein | denotes | IL-6 |
R8368 | T11164 | T11170 | themeOf | IL-1β,increased |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11199 | 138-147 | Positive_regulation | denotes | increased |
T11194 | 59-64 | Protein | denotes | IL-1β |
T11193 | 51-54 | Protein | denotes | TNF |
T11192 | 45-49 | Protein | denotes | IL-6 |
R8384 | T11192 | T11199 | themeOf | IL-6,increased |
R8385 | T11193 | T11199 | themeOf | TNF,increased |
R8386 | T11194 | T11199 | themeOf | IL-1β,increased |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11410 | 45-49 | Protein | denotes | IL-6 |
T11401 | 223-233 | Protein | denotes | figure S3A |
T11505 | 66-132 | Binding | denotes | which are often associated with immunopathogenesis in humans [64], |
T11486 | 59-65 | Protein | denotes | IL-1β, |
T11479 | 175-179 | Protein | denotes | mice |
T11456 | 51-54 | Protein | denotes | TNF |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11033 | 234-235 | . | denotes | . |
T11032 | 233-234 | -RRB- | denotes | ) |
T11031 | 230-233 | NNP | denotes | S3A |
T11030 | 223-229 | NN | denotes | figure |
T11029 | 219-222 | CC | denotes | and |
T11028 | 216-218 | NN | denotes | 4C |
T11027 | 209-215 | NN | denotes | figure |
T11026 | 208-209 | -LRB- | denotes | ( |
T11025 | 200-207 | NNS | denotes | animals |
T11024 | 192-199 | VB | denotes | control |
T11023 | 189-191 | TO | denotes | to |
T11022 | 180-188 | VBN | denotes | compared |
T11021 | 175-179 | NNS | denotes | mice |
T11020 | 164-174 | JJ | denotes | A20myel-KO |
T11019 | 161-163 | IN | denotes | of |
T11018 | 155-160 | NNS | denotes | lungs |
T11017 | 151-154 | DT | denotes | the |
T11016 | 148-150 | IN | denotes | in |
T11015 | 138-147 | VBN | denotes | increased |
T11014 | 133-137 | VBD | denotes | were |
T11013 | 131-132 | , | denotes | , |
T11012 | 130-131 | NNP | denotes | ] |
T11011 | 128-130 | CD | denotes | 64 |
T11010 | 127-128 | NNP | denotes | [ |
T11009 | 120-126 | NNS | denotes | humans |
T11008 | 117-119 | IN | denotes | in |
T11007 | 98-116 | NN | denotes | immunopathogenesis |
T11006 | 93-97 | IN | denotes | with |
T11005 | 82-92 | VBN | denotes | associated |
T11004 | 76-81 | RB | denotes | often |
T11003 | 72-75 | VBP | denotes | are |
T11002 | 66-71 | WDT | denotes | which |
T11001 | 64-65 | , | denotes | , |
T11000 | 59-64 | NNP | denotes | IL-1β |
T10999 | 55-58 | CC | denotes | and |
T10998 | 51-54 | NNP | denotes | TNF |
T10997 | 49-50 | , | denotes | , |
T10996 | 45-49 | NNP | denotes | IL-6 |
T10995 | 35-44 | NNS | denotes | cytokines |
T10994 | 19-34 | JJ | denotes | proinflammatory |
T10993 | 15-18 | DT | denotes | the |
T10992 | 12-14 | IN | denotes | of |
T10991 | 5-11 | NNS | denotes | levels |
T10990 | 0-4 | RB | denotes | Also |
R8233 | T10990 | T11015 | advmod | Also,increased |
R8235 | T10991 | T11015 | nsubjpass | levels,increased |
R8236 | T10992 | T10991 | prep | of,levels |
R8237 | T10993 | T10995 | det | the,cytokines |
R8239 | T10994 | T10995 | amod | proinflammatory,cytokines |
R8240 | T10995 | T10992 | pobj | cytokines,of |
R8241 | T10996 | T11015 | nsubjpass | IL-6,increased |
R8243 | T10997 | T10996 | punct | ",",IL-6 |
R8244 | T10998 | T10996 | conj | TNF,IL-6 |
R8245 | T10999 | T10998 | cc | and,TNF |
R8247 | T11000 | T10998 | conj | IL-1β,TNF |
R8248 | T11001 | T11000 | punct | ",",IL-1β |
R8249 | T11002 | T11005 | nsubjpass | which,associated |
R8251 | T11003 | T11005 | auxpass | are,associated |
R8252 | T11004 | T11005 | advmod | often,associated |
R8253 | T11005 | T10996 | relcl | associated,IL-6 |
R8254 | T11006 | T11005 | prep | with,associated |
R8255 | T11007 | T11006 | pobj | immunopathogenesis,with |
R8256 | T11008 | T11007 | prep | in,immunopathogenesis |
R8258 | T11009 | T11008 | pobj | humans,in |
R8259 | T11010 | T11012 | nmod | [,] |
R8260 | T11011 | T11012 | nummod | 64,] |
R8261 | T11012 | T11007 | appos | ],immunopathogenesis |
R8262 | T11013 | T11015 | punct | ",",increased |
R8263 | T11014 | T11015 | auxpass | were,increased |
R8265 | T11015 | T11015 | ROOT | increased,increased |
R8266 | T11016 | T11015 | prep | in,increased |
R8267 | T11017 | T11018 | det | the,lungs |
R8269 | T11018 | T11016 | pobj | lungs,in |
R8270 | T11019 | T11018 | prep | of,lungs |
R8271 | T11020 | T11021 | amod | A20myel-KO,mice |
R8273 | T11021 | T11019 | pobj | mice,of |
R8274 | T11022 | T11015 | prep | compared,increased |
R8275 | T11023 | T11024 | aux | to,control |
R8276 | T11024 | T11022 | xcomp | control,compared |
R8278 | T11025 | T11024 | dobj | animals,control |
R8279 | T11026 | T11025 | punct | (,animals |
R8280 | T11027 | T11028 | compound | figure,4C |
R8282 | T11028 | T11025 | appos | 4C,animals |
R8283 | T11029 | T11028 | cc | and,4C |
R8284 | T11030 | T11031 | compound | figure,S3A |
R8285 | T11031 | T11028 | conj | S3A,4C |
R8287 | T11032 | T11031 | punct | ),S3A |
R8288 | T11033 | T11015 | punct | .,increased |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11294 | 138-147 | Positive_regulation | denotes | increased |
T11293 | 138-147 | Positive_regulation | denotes | increased |
T11292 | 138-147 | Positive_regulation | denotes | increased |
T11291 | 5-11 | Gene_expression | denotes | levels |
T11290 | 5-11 | Gene_expression | denotes | levels |
T11289 | 5-11 | Gene_expression | denotes | levels |
T11288 | 59-64 | Protein | denotes | IL-1β |
T11287 | 51-54 | Protein | denotes | TNF |
T11286 | 35-49 | Protein | denotes | cytokines IL-6 |
R8423 | T11286 | T11289 | themeOf | cytokines IL-6,levels |
R8424 | T11287 | T11290 | themeOf | TNF,levels |
R8426 | T11288 | T11291 | themeOf | IL-1β,levels |
R8427 | T11289 | T11292 | themeOf | levels,increased |
R8429 | T11290 | T11293 | themeOf | levels,increased |
R8430 | T11291 | T11294 | themeOf | levels,increased |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8638 | 138-147 | Positive_regulation | denotes | increased |
T8615 | 59-64 | Protein | denotes | IL-1β |
T8614 | 51-54 | Protein | denotes | TNF |
T8613 | 45-49 | Protein | denotes | IL-6 |
R6092 | T8614 | T8638 | themeOf | TNF,increased |
R6093 | T8615 | T8638 | themeOf | IL-1β,increased |