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PMC:3291650 / 22582-22861 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9700 274-278 NN denotes mice
T9699 263-273 NN denotes A20myel-KO
T9698 260-262 IN denotes in
T9697 250-259 NN denotes clearance
T9696 244-249 JJ denotes viral
T9695 237-243 JJ denotes better
T9694 233-236 DT denotes the
T9693 230-232 TO denotes to
T9692 219-229 VB denotes contribute
T9691 217-218 -COMMA- denotes ,
T9690 206-217 NN denotes macrophages
T9689 197-205 JJ denotes alveolar
T9688 194-196 IN denotes of
T9687 186-193 NN denotes numbers
T9686 176-185 VB denotes increased
T9685 172-175 CC denotes and
T9684 160-171 NN denotes neutrophils
T9683 157-159 IN denotes of
T9682 150-156 NN denotes influx
T9681 140-149 VB denotes increased
T9680 137-139 DT denotes an
T9679 134-136 IN denotes by
T9678 120-133 VB denotes characterized
T9677 118-119 -COMMA- denotes ,
T9676 110-118 NN denotes response
T9675 103-109 JJ denotes immune
T9674 96-102 JJ denotes innate
T9673 86-95 VB denotes increased
T9672 83-85 DT denotes an
T9671 80-82 IN denotes as
T9670 75-79 JJ denotes such
T9669 73-74 -COMMA- denotes ,
T9668 65-73 NN denotes immunity
T9667 56-64 JJ denotes adaptive
T9666 51-55 IN denotes than
T9665 45-50 JJ denotes other
T9664 34-44 NN denotes mechanisms
T9663 29-33 IN denotes that
T9662 21-28 VB denotes suggest
T9661 16-20 NN denotes data
T9660 10-15 DT denotes these
T9659 8-9 -COMMA- denotes ,
T9658 0-8 RB denotes Together
R6902 T9661 T9660 arg1Of data,these
R6903 T9661 T9662 arg1Of data,suggest
R6904 T9662 T9658 arg1Of suggest,Together
R6905 T9662 T9659 arg1Of suggest,","
R6906 T9664 T9665 arg1Of mechanisms,other
R6907 T9664 T9669 arg1Of mechanisms,","
R6908 T9664 T9671 arg1Of mechanisms,as
R6909 T9664 T9692 arg1Of mechanisms,contribute
R6910 T9665 T9666 arg1Of other,than
R6911 T9668 T9666 arg2Of immunity,than
R6912 T9668 T9667 arg1Of immunity,adaptive
R6913 T9671 T9670 arg1Of as,such
R6914 T9676 T9671 arg2Of response,as
R6915 T9676 T9672 arg1Of response,an
R6916 T9676 T9673 arg2Of response,increased
R6917 T9676 T9674 arg1Of response,innate
R6918 T9676 T9675 arg1Of response,immune
R6919 T9676 T9677 arg1Of response,","
R6920 T9676 T9678 arg2Of response,characterized
R6921 T9682 T9678 arg1Of influx,characterized
R6922 T9682 T9679 arg2Of influx,by
R6923 T9682 T9680 arg1Of influx,an
R6924 T9682 T9681 arg2Of influx,increased
R6925 T9682 T9683 arg1Of influx,of
R6926 T9682 T9688 arg1Of influx,of
R6927 T9684 T9685 arg1Of neutrophils,and
R6928 T9685 T9683 arg2Of and,of
R6929 T9687 T9685 arg2Of numbers,and
R6930 T9687 T9686 arg2Of numbers,increased
R6931 T9690 T9688 arg2Of macrophages,of
R6932 T9690 T9689 arg1Of macrophages,alveolar
R6933 T9692 T9662 arg2Of contribute,suggest
R6934 T9692 T9663 arg1Of contribute,that
R6935 T9692 T9691 arg1Of contribute,","
R6936 T9692 T9693 arg1Of contribute,to
R6937 T9697 T9693 arg2Of clearance,to
R6938 T9697 T9694 arg1Of clearance,the
R6939 T9697 T9695 arg1Of clearance,better
R6940 T9697 T9696 arg1Of clearance,viral
R6941 T9697 T9698 arg1Of clearance,in
R6942 T9700 T9698 arg2Of mice,in
R6943 T9700 T9699 arg1Of mice,A20myel-KO

GO-BP

Id Subject Object Predicate Lexical cue
T8848 96-118 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune response
T8846 96-118 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune response
T8844 96-118 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune response
T8842 96-118 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune response
T8840 96-118 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune response
T8838 96-118 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T8837 96-109 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T8829 103-118 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T8823 197-205 http://purl.obolibrary.org/obo/GO_0048286 denotes alveolar

sentences

Id Subject Object Predicate Lexical cue
T8742 0-279 Sentence denotes Together, these data suggest that mechanisms other than adaptive immunity, such as an increased innate immune response, characterized by an increased influx of neutrophils and increased numbers of alveolar macrophages, contribute to the better viral clearance in A20myel-KO mice.
T140 0-279 Sentence denotes Together, these data suggest that mechanisms other than adaptive immunity, such as an increased innate immune response, characterized by an increased influx of neutrophils and increased numbers of alveolar macrophages, contribute to the better viral clearance in A20myel-KO mice.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T11421 160-171 Entity denotes neutrophils
T11409 263-278 Protein denotes A20myel-KO mice
T11488 194-217 Entity denotes of alveolar macrophages

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10809 278-279 . denotes .
T10808 274-278 NNS denotes mice
T10807 263-273 JJ denotes A20myel-KO
T10806 260-262 IN denotes in
T10805 250-259 NN denotes clearance
T10804 244-249 JJ denotes viral
T10803 237-243 JJR denotes better
T10802 233-236 DT denotes the
T10801 230-232 TO denotes to
T10800 219-229 VBP denotes contribute
T10799 217-218 , denotes ,
T10798 206-217 NNS denotes macrophages
T10797 197-205 JJ denotes alveolar
T10796 194-196 IN denotes of
T10795 186-193 NNS denotes numbers
T10794 176-185 VBD denotes increased
T10793 172-175 CC denotes and
T10792 160-171 NNS denotes neutrophils
T10791 157-159 IN denotes of
T10790 150-156 NN denotes influx
T10789 140-149 VBN denotes increased
T10788 137-139 DT denotes an
T10787 134-136 IN denotes by
T10786 120-133 VBN denotes characterized
T10785 118-119 , denotes ,
T10784 110-118 NN denotes response
T10783 103-109 JJ denotes immune
T10782 96-102 NN denotes innate
T10781 86-95 VBN denotes increased
T10780 83-85 DT denotes an
T10779 80-82 IN denotes as
T10778 75-79 JJ denotes such
T10777 73-74 , denotes ,
T10776 65-73 NN denotes immunity
T10775 56-64 JJ denotes adaptive
T10774 51-55 IN denotes than
T10773 45-50 JJ denotes other
T10772 34-44 NNS denotes mechanisms
T10771 29-33 IN denotes that
T10770 21-28 VBP denotes suggest
T10769 16-20 NNS denotes data
T10768 10-15 DT denotes these
T10767 8-9 , denotes ,
T10766 0-8 RB denotes Together
R7933 T10766 T10770 advmod Together,suggest
R7934 T10767 T10770 punct ",",suggest
R7935 T10768 T10769 det these,data
R7937 T10769 T10770 nsubj data,suggest
R7938 T10770 T10770 ROOT suggest,suggest
R7939 T10771 T10800 mark that,contribute
R7940 T10772 T10800 nsubj mechanisms,contribute
R7942 T10773 T10772 amod other,mechanisms
R7943 T10774 T10773 prep than,other
R7944 T10775 T10776 amod adaptive,immunity
R7946 T10776 T10774 pobj immunity,than
R7947 T10777 T10772 punct ",",mechanisms
R7948 T10778 T10779 amod such,as
R7949 T10779 T10772 prep as,mechanisms
R7950 T10780 T10784 det an,response
R7951 T10781 T10784 amod increased,response
R7953 T10782 T10784 amod innate,response
R7954 T10783 T10784 amod immune,response
R7955 T10784 T10779 pobj response,as
R7956 T10785 T10784 punct ",",response
R7958 T10786 T10784 acl characterized,response
R7959 T10787 T10786 agent by,characterized
R7960 T10788 T10790 det an,influx
R7962 T10789 T10790 amod increased,influx
R7963 T10790 T10787 pobj influx,by
R7964 T10791 T10790 prep of,influx
R7966 T10792 T10791 pobj neutrophils,of
R7967 T10793 T10790 cc and,influx
R7968 T10794 T10795 amod increased,numbers
R7970 T10795 T10790 conj numbers,influx
R7971 T10796 T10795 prep of,numbers
R7972 T10797 T10798 amod alveolar,macrophages
R7973 T10798 T10796 pobj macrophages,of
R7975 T10799 T10800 punct ",",contribute
R7976 T10800 T10770 ccomp contribute,suggest
R7977 T10801 T10800 prep to,contribute
R7979 T10802 T10805 det the,clearance
R7980 T10803 T10805 amod better,clearance
R7981 T10804 T10805 amod viral,clearance
R7983 T10805 T10801 pobj clearance,to
R7984 T10806 T10805 prep in,clearance
R7985 T10807 T10808 amod A20myel-KO,mice
R7986 T10808 T10806 pobj mice,in
R7988 T10809 T10770 punct .,suggest