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PMC:3291650 / 14717-14814 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T4715 92-96 Protein denotes IFNβ
T4714 78-88 Gene_expression denotes expression
T4713 66-73 Regulation denotes control
T4712 61-65 Protein denotes IRF3
T4711 42-45 Protein denotes TNF
T4710 33-37 Protein denotes IL-6
T4709 19-29 Gene_expression denotes expression
T4708 6-14 Regulation denotes controls
T4618 92-96 Protein denotes IFNβ
T4617 61-65 Protein denotes IRF3
T4616 42-45 Protein denotes TNF
T4615 33-37 Protein denotes IL-6
R3213 T4709 T4708 themeOf expression,controls
R3214 T4710 T4709 themeOf IL-6,expression
R3215 T4711 T4709 themeOf TNF,expression
R3216 T4712 T4713 causeOf IRF3,control
R3217 T4712 T4709 themeOf IRF3,expression
R3218 T4714 T4713 themeOf expression,control
R3219 T4715 T4714 themeOf IFNβ,expression

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5782 92-96 NN denotes IFNβ
T5781 89-91 IN denotes of
T5780 78-88 NN denotes expression
T5779 74-77 DT denotes the
T5778 66-73 VB denotes control
T5777 61-65 NN denotes IRF3
T5776 57-60 CC denotes and
T5775 51-56 NN denotes NF-κB
T5774 47-50 CC denotes and
T5773 45-46 -COMMA- denotes ,
T5772 42-45 NN denotes TNF
T5771 38-41 CC denotes and
T5770 33-37 NN denotes IL-6
T5769 30-32 IN denotes of
T5768 19-29 NN denotes expression
T5767 15-18 DT denotes the
T5766 6-14 VB denotes controls
T5765 0-5 NN denotes NF-κB
R4026 T5765 T5766 arg1Of NF-κB,controls
R4027 T5766 T5774 arg1Of controls,and
R4028 T5768 T5766 arg2Of expression,controls
R4029 T5768 T5767 arg1Of expression,the
R4030 T5768 T5769 arg1Of expression,of
R4031 T5770 T5771 arg1Of IL-6,and
R4032 T5771 T5769 arg2Of and,of
R4033 T5772 T5771 arg2Of TNF,and
R4034 T5774 T5773 arg1Of and,","
R4035 T5775 T5776 arg1Of NF-κB,and
R4036 T5776 T5778 arg1Of and,control
R4037 T5777 T5776 arg2Of IRF3,and
R4038 T5778 T5774 arg2Of control,and
R4039 T5780 T5778 arg2Of expression,control
R4040 T5780 T5779 arg1Of expression,the
R4041 T5780 T5781 arg1Of expression,of
R4042 T5782 T5781 arg2Of IFNβ,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4938 92-96 Protein denotes IFNβ
T4937 61-65 Protein denotes IRF3
T4936 42-45 Protein denotes TNF
T4935 33-37 Protein denotes IL-6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6694 42-45 http://www.uniprot.org/uniprot/P01375 denotes TNF
T6692 33-37 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6669 61-65 http://www.uniprot.org/uniprot/Q14653 denotes IRF3

GO-MF

Id Subject Object Predicate Lexical cue
T4966 33-37 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T4746 0-97 Sentence denotes NF-κB controls the expression of IL-6 and TNF, and NF-κB and IRF3 control the expression of IFNβ.
T89 0-97 Sentence denotes NF-κB controls the expression of IL-6 and TNF, and NF-κB and IRF3 control the expression of IFNβ.

simple1

Id Subject Object Predicate Lexical cue
T5076 92-96 Protein denotes IFNβ
T5075 61-65 Protein denotes IRF3
T5074 42-45 Protein denotes TNF
T5073 33-37 Protein denotes IL-6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7383 78-88 Gene_expression denotes expression
T7382 6-14 Regulation denotes controls
T7381 19-29 Gene_expression denotes expression
T7380 66-73 Regulation denotes control
T7335 92-96 Protein denotes IFNβ
T7334 61-65 Protein denotes IRF3
T7333 42-45 Protein denotes TNF
T7332 33-37 Protein denotes IL-6
R5318 T7381 T7382 themeOf expression,controls
R5319 T7381 T7382 themeOf expression,controls
R5320 T7383 T7380 themeOf expression,control
R5279 T7332 T7381 themeOf IL-6,expression
R5280 T7333 T7381 themeOf TNF,expression
R5281 T7335 T7383 themeOf IFNβ,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6790 78-88 Gene_expression denotes expression
T6789 6-14 Regulation denotes controls
T6788 19-29 Gene_expression denotes expression
T6742 92-96 Protein denotes IFNβ
T6741 61-65 Protein denotes IRF3
T6740 42-45 Protein denotes TNF
T6739 33-37 Protein denotes IL-6
R4938 T6739 T6788 themeOf IL-6,expression
R4939 T6740 T6788 themeOf TNF,expression
R4940 T6742 T6790 themeOf IFNβ,expression
R4952 T6788 T6789 themeOf expression,controls
R4953 T6788 T6789 themeOf expression,controls

DLUT931

Id Subject Object Predicate Lexical cue
T6969 6-14 Regulation denotes controls
T6968 78-88 Gene_expression denotes expression
T6967 19-29 Gene_expression denotes expression
T6916 92-96 Protein denotes IFNβ
T6915 61-65 Protein denotes IRF3
T6914 42-45 Protein denotes TNF
T6913 33-37 Protein denotes IL-6
R5026 T6967 T6969 themeOf expression,controls
R5027 T6967 T6969 themeOf expression,controls
R5029 T6968 T6969 themeOf expression,controls
R5031 T6913 T6967 themeOf IL-6,expression
R5037 T6914 T6967 themeOf TNF,expression
R5039 T6916 T6968 themeOf IFNβ,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7547 15-45 Gene_expression denotes the expression of IL-6 and TNF
T7546 15-45 Gene_expression denotes the expression of IL-6 and TNF
T7515 61-65 Protein denotes IRF3
T7488 51-56 Protein denotes NF-κB
T7483 42-45 Protein denotes TNF
T7433 33-37 Protein denotes IL-6
T7426 89-96 Protein denotes of IFNβ
T7401 0-5 Protein denotes NF-κB
T7543 0-45 Regulation denotes NF-κB controls the expression of IL-6 and TNF
T7542 0-45 Regulation denotes NF-κB controls the expression of IL-6 and TNF
T7535 74-96 Gene_expression denotes the expression of IFNβ
T7530 51-96 Regulation denotes NF-κB and IRF3 control the expression of IFNβ
T7529 51-96 Regulation denotes NF-κB and IRF3 control the expression of IFNβ
R5324 T7401 T7542 causeOf NF-κB,NF-κB controls the expression of IL-6 and TNF
R5325 T7401 T7543 causeOf NF-κB,NF-κB controls the expression of IL-6 and TNF
R5342 T7515 T7529 causeOf IRF3,NF-κB and IRF3 control the expression of IFNβ
R5349 T7426 T7535 themeOf of IFNβ,the expression of IFNβ
R5352 T7535 T7529 themeOf the expression of IFNβ,NF-κB and IRF3 control the expression of IFNβ
R5353 T7535 T7530 themeOf the expression of IFNβ,NF-κB and IRF3 control the expression of IFNβ
R5354 T7433 T7546 themeOf IL-6,the expression of IL-6 and TNF
R5358 T7546 T7542 themeOf the expression of IL-6 and TNF,NF-κB controls the expression of IL-6 and TNF
R5359 T7547 T7543 themeOf the expression of IL-6 and TNF,NF-κB controls the expression of IL-6 and TNF
R5376 T7483 T7547 themeOf TNF,the expression of IL-6 and TNF
R5378 T7488 T7530 causeOf NF-κB,NF-κB and IRF3 control the expression of IFNβ

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6569 96-97 . denotes .
T6568 92-96 NNP denotes IFNβ
T6567 89-91 IN denotes of
T6566 78-88 NN denotes expression
T6565 74-77 DT denotes the
T6564 66-73 VBP denotes control
T6563 61-65 NNP denotes IRF3
T6562 57-60 CC denotes and
T6561 51-56 NNP denotes NF-κB
T6560 47-50 CC denotes and
T6559 45-46 , denotes ,
T6558 42-45 NNP denotes TNF
T6557 38-41 CC denotes and
T6556 33-37 NNP denotes IL-6
T6555 30-32 IN denotes of
T6554 19-29 NN denotes expression
T6553 15-18 DT denotes the
T6552 6-14 VBZ denotes controls
T6551 0-5 NN denotes NF-κB
R4771 T6565 T6566 det the,expression
R4772 T6566 T6564 dobj expression,control
R4773 T6567 T6566 prep of,expression
R4774 T6568 T6567 pobj IFNβ,of
R4776 T6569 T6564 punct .,control
R4752 T6551 T6552 nsubj NF-κB,controls
R4753 T6552 T6552 ROOT controls,controls
R4754 T6553 T6554 det the,expression
R4756 T6554 T6552 dobj expression,controls
R4757 T6555 T6554 prep of,expression
R4758 T6556 T6555 pobj IL-6,of
R4760 T6557 T6556 cc and,IL-6
R4761 T6558 T6556 conj TNF,IL-6
R4762 T6559 T6552 punct ",",controls
R4764 T6560 T6552 cc and,controls
R4765 T6561 T6564 nsubj NF-κB,control
R4767 T6562 T6561 cc and,NF-κB
R4768 T6563 T6561 conj IRF3,NF-κB
R4769 T6564 T6552 conj control,controls

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7113 66-73 Regulation denotes control
T7112 66-73 Regulation denotes control
T7111 6-14 Regulation denotes controls
T7110 6-14 Regulation denotes controls
T7109 78-88 Gene_expression denotes expression
T7108 19-29 Gene_expression denotes expression
T7107 19-29 Gene_expression denotes expression
T7106 92-96 Protein denotes IFNβ
T7105 61-65 Protein denotes IRF3
T7104 51-56 Protein denotes NF-κB
T7103 42-45 Protein denotes TNF
T7102 33-37 Protein denotes IL-6
T7101 0-5 Protein denotes NF-κB
R5131 T7102 T7107 themeOf IL-6,expression
R5134 T7103 T7108 themeOf TNF,expression
R5137 T7106 T7109 themeOf IFNβ,expression
R5145 T7107 T7110 themeOf expression,controls
R5147 T7108 T7111 themeOf expression,controls
R5148 T7109 T7112 themeOf expression,control
R5149 T7109 T7113 themeOf expression,control
R5150 T7110 T7101 Cause controls,NF-κB
R5151 T7111 T7101 Cause controls,NF-κB
R5152 T7112 T7104 Cause control,NF-κB
R5155 T7113 T7105 Cause control,IRF3

testone

Id Subject Object Predicate Lexical cue
T4569 78-88 Gene_expression denotes expression
T4568 66-73 Regulation denotes control
T4567 19-29 Gene_expression denotes expression
T4566 6-14 Regulation denotes controls
T4516 92-96 Protein denotes IFNβ
T4515 61-65 Protein denotes IRF3
T4514 42-45 Protein denotes TNF
T4513 33-37 Protein denotes IL-6
R3142 T4513 T4567 themeOf IL-6,expression
R3143 T4514 T4567 themeOf TNF,expression
R3144 T4515 T4567 themeOf IRF3,expression
R3145 T4516 T4569 themeOf IFNβ,expression
R3164 T4567 T4566 themeOf expression,controls
R3165 T4569 T4568 themeOf expression,control