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PMC:3291650 / 14566-14716 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T4707 95-104 Negative_regulation denotes deficient
T4706 29-42 Localization denotes translocation
T4705 21-28 Entity denotes nuclear
T4704 16-20 Protein denotes IRF3
T4703 11-14 Protein denotes p65
T4614 16-20 Protein denotes IRF3
T4613 11-14 Protein denotes p65
R3210 T4703 T4706 themeOf p65,translocation
R3211 T4704 T4706 themeOf IRF3,translocation
R3212 T4705 T4706 locationOf nuclear,translocation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5764 148-149 -RRB- denotes )
T5763 146-148 NN denotes 1C
T5762 139-145 NN denotes figure
T5761 138-139 -LRB- denotes (
T5760 132-137 NN denotes cells
T5759 127-131 NN denotes type
T5758 122-126 JJ denotes wild
T5757 119-121 TO denotes to
T5756 110-118 VB denotes compared
T5755 105-109 NN denotes BMDM
T5754 95-104 JJ denotes deficient
T5753 91-94 NN denotes A20
T5752 88-90 IN denotes in
T5751 82-87 NN denotes point
T5750 77-81 NN denotes time
T5749 69-76 JJ denotes earlier
T5748 66-68 DT denotes an
T5747 63-65 IN denotes at
T5746 55-62 NN denotes maximum
T5745 51-54 PRP-DOLLAR- denotes its
T5744 43-50 VB denotes reached
T5743 29-42 NN denotes translocation
T5742 21-28 JJ denotes nuclear
T5741 16-20 NN denotes IRF3
T5740 14-15 -COMMA- denotes ,
T5739 11-14 NN denotes p65
T5738 8-10 TO denotes to
T5737 0-7 JJ denotes Similar
R3999 T5737 T5738 arg1Of Similar,to
R4000 T5739 T5738 arg2Of p65,to
R4001 T5743 T5741 arg1Of translocation,IRF3
R4002 T5743 T5742 arg1Of translocation,nuclear
R4003 T5743 T5744 arg1Of translocation,reached
R4004 T5744 T5737 arg1Of reached,Similar
R4005 T5744 T5740 arg1Of reached,","
R4006 T5744 T5747 arg1Of reached,at
R4007 T5744 T5756 arg1Of reached,compared
R4008 T5746 T5744 arg2Of maximum,reached
R4009 T5746 T5745 arg1Of maximum,its
R4010 T5749 T5750 arg1Of earlier,time
R4011 T5751 T5747 arg2Of point,at
R4012 T5751 T5748 arg1Of point,an
R4013 T5751 T5749 arg1Of point,earlier
R4014 T5751 T5752 arg1Of point,in
R4015 T5755 T5752 arg2Of BMDM,in
R4016 T5755 T5753 arg1Of BMDM,A20
R4017 T5755 T5754 arg1Of BMDM,deficient
R4018 T5757 T5756 arg2Of to,compared
R4019 T5760 T5757 arg2Of cells,to
R4020 T5760 T5758 arg1Of cells,wild
R4021 T5760 T5759 arg1Of cells,type
R4022 T5760 T5761 arg1Of cells,(
R4023 T5763 T5761 arg2Of 1C,(
R4024 T5763 T5762 arg1Of 1C,figure
R4025 T5764 T5761 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4934 16-20 Protein denotes IRF3
T4933 11-14 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6690 11-14 http://www.uniprot.org/uniprot/P21579 denotes p65
T6688 11-14 http://www.uniprot.org/uniprot/Q04206 denotes p65
T6668 16-20 http://www.uniprot.org/uniprot/Q14653 denotes IRF3
T6655 91-94 http://www.uniprot.org/uniprot/P21580 denotes A20

GO-CC

Id Subject Object Predicate Lexical cue
T4973 132-137 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4745 0-150 Sentence denotes Similar to p65, IRF3 nuclear translocation reached its maximum at an earlier time point in A20 deficient BMDM compared to wild type cells (figure 1C).
T88 0-150 Sentence denotes Similar to p65, IRF3 nuclear translocation reached its maximum at an earlier time point in A20 deficient BMDM compared to wild type cells (figure 1C).

simple1

Id Subject Object Predicate Lexical cue
T5072 16-20 Protein denotes IRF3
T5071 11-14 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7379 29-42 Localization denotes translocation
T7331 16-20 Protein denotes IRF3
T7330 11-14 Protein denotes p65
R5277 T7331 T7379 themeOf IRF3,translocation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6738 16-20 Protein denotes IRF3
T6737 11-14 Protein denotes p65
T6787 29-42 Localization denotes translocation
R4937 T6738 T6787 themeOf IRF3,translocation

DLUT931

Id Subject Object Predicate Lexical cue
T6966 43-50 Positive_regulation denotes reached
T6965 29-42 Localization denotes translocation
T6912 16-20 Protein denotes IRF3
T6911 11-14 Protein denotes p65
R5025 T6965 T6966 themeOf translocation,reached
R5028 T6912 T6965 themeOf IRF3,translocation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7519 119-149 Entity denotes to wild type cells (figure 1C)
T7505 91-94 Protein denotes A20
T7479 16-20 Protein denotes IRF3
T7442 11-15 Protein denotes p65,

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6550 149-150 . denotes .
T6549 148-149 -RRB- denotes )
T6526 16-20 JJ denotes IRF3
T6525 14-15 , denotes ,
T6524 11-14 VB denotes p65
T6523 8-10 TO denotes to
T6522 0-7 JJ denotes Similar
T6548 146-148 NNP denotes 1C
T6547 139-145 NN denotes figure
T6546 138-139 -LRB- denotes (
T6545 132-137 NNS denotes cells
T6544 127-131 NN denotes type
T6543 122-126 JJ denotes wild
T6542 119-121 TO denotes to
T6541 110-118 VBN denotes compared
T6540 105-109 NNP denotes BMDM
T6539 95-104 JJ denotes deficient
T6538 91-94 CD denotes A20
T6537 88-90 IN denotes in
T6536 82-87 NN denotes point
T6535 77-81 NN denotes time
T6534 69-76 JJR denotes earlier
T6533 66-68 DT denotes an
T6532 63-65 IN denotes at
T6531 55-62 NN denotes maximum
T6530 51-54 PRP$ denotes its
T6529 43-50 VBD denotes reached
T6528 29-42 NN denotes translocation
T6527 21-28 JJ denotes nuclear
R4719 T6527 T6528 amod nuclear,translocation
R4720 T6528 T6529 nsubj translocation,reached
R4722 T6529 T6529 ROOT reached,reached
R4723 T6530 T6531 poss its,maximum
R4724 T6531 T6529 dobj maximum,reached
R4726 T6532 T6529 prep at,reached
R4727 T6533 T6536 det an,point
R4728 T6534 T6535 amod earlier,time
R4730 T6535 T6536 compound time,point
R4731 T6536 T6532 pobj point,at
R4733 T6537 T6529 prep in,reached
R4734 T6538 T6540 nummod A20,BMDM
R4735 T6539 T6540 amod deficient,BMDM
R4736 T6540 T6537 pobj BMDM,in
R4737 T6541 T6529 prep compared,reached
R4738 T6542 T6541 prep to,compared
R4740 T6543 T6545 amod wild,cells
R4741 T6544 T6545 compound type,cells
R4742 T6545 T6542 pobj cells,to
R4743 T6546 T6548 punct (,1C
R4745 T6547 T6548 compound figure,1C
R4892 T6522 T6529 advcl Similar,reached
R4893 T6523 T6524 aux to,p65
R4894 T6524 T6522 xcomp p65,Similar
R4895 T6525 T6524 punct ",",p65
R4896 T6526 T6524 dep IRF3,p65
R4748 T6548 T6545 appos 1C,cells
R4749 T6549 T6545 punct ),cells
R4750 T6550 T6529 punct .,reached

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7100 29-42 Localization denotes translocation
T7099 21-28 Entity denotes nuclear
T7098 16-20 Protein denotes IRF3
T7097 11-14 Protein denotes p65
R5123 T7098 T7100 themeOf IRF3,translocation
R5127 T7100 T7099 ToLoc translocation,nuclear

testone

Id Subject Object Predicate Lexical cue
T4565 95-104 Negative_regulation denotes deficient
T4564 29-42 Localization denotes translocation
T4563 21-28 Entity denotes nuclear
T4512 16-20 Protein denotes IRF3
T4511 11-14 Protein denotes p65
R3140 T4511 T4564 themeOf p65,translocation
R3141 T4512 T4564 themeOf IRF3,translocation
R3163 T4563 T4564 locationOf nuclear,translocation