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PMC:3291650 / 13944-14141 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T4692 64-72 Positive_regulation denotes enhanced
T4691 42-45 Protein denotes p65
T4690 21-34 Localization denotes translocation
T4689 13-20 Entity denotes nuclear
T4608 42-45 Protein denotes p65
R3202 T4689 T4690 locationOf nuclear,translocation
R3203 T4690 T4692 themeOf translocation,enhanced
R3204 T4691 T4690 themeOf p65,translocation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5660 174-178 NN denotes type
T5659 169-173 JJ denotes wild
T5658 166-168 TO denotes to
T5657 157-165 VB denotes compared
T5656 150-156 NN denotes points
T5655 145-149 NN denotes time
T5654 137-144 JJ denotes earlier
T5653 134-136 IN denotes at
T5652 126-133 NN denotes maximum
T5651 124-125 DT denotes a
T5650 115-123 VB denotes reaching
T5649 113-114 -COMMA- denotes ,
T5648 109-113 NN denotes BMDM
T5647 98-108 NN denotes A20myel-KO
T5646 86-97 VB denotes transfected
T5645 84-85 -RRB- denotes )
T5644 83-84 NN denotes C
T5643 82-83 SYM denotes :
T5642 81-82 NN denotes I
T5641 80-81 -LRB- denotes (
T5640 76-80 NN denotes poly
T5639 73-75 IN denotes in
T5638 64-72 VB denotes enhanced
T5637 60-63 VB denotes was
T5636 52-59 NN denotes subunit
T5635 46-51 NN denotes NF-κB
T5634 42-45 NN denotes p65
T5633 38-41 DT denotes the
T5632 35-37 IN denotes of
T5631 21-34 NN denotes translocation
T5630 13-20 JJ denotes nuclear
T5629 11-12 -COMMA- denotes ,
T5628 0-11 RB denotes Furthermore
T5665 195-196 -RRB- denotes )
T5664 193-195 NN denotes 1C
T5663 186-192 NN denotes figure
T5662 185-186 -LRB- denotes (
T5661 179-184 NN denotes cells
R3887 T5631 T5630 arg1Of translocation,nuclear
R3888 T5631 T5632 arg1Of translocation,of
R3889 T5631 T5637 arg1Of translocation,was
R3890 T5631 T5638 arg2Of translocation,enhanced
R3891 T5636 T5632 arg2Of subunit,of
R3892 T5636 T5633 arg1Of subunit,the
R3893 T5636 T5634 arg1Of subunit,p65
R3894 T5636 T5635 arg1Of subunit,NF-κB
R3895 T5638 T5628 arg1Of enhanced,Furthermore
R3896 T5638 T5629 arg1Of enhanced,","
R3897 T5638 T5637 arg2Of enhanced,was
R3898 T5638 T5639 arg1Of enhanced,in
R3899 T5638 T5649 arg1Of enhanced,","
R3900 T5640 T5641 arg1Of poly,(
R3901 T5642 T5641 arg2Of I,(
R3902 T5642 T5643 arg1Of I,:
R3903 T5642 T5644 arg1Of I,C
R3904 T5645 T5641 arg3Of ),(
R3905 T5648 T5639 arg2Of BMDM,in
R3906 T5648 T5640 arg1Of BMDM,poly
R3907 T5648 T5646 arg2Of BMDM,transfected
R3908 T5648 T5647 arg1Of BMDM,A20myel-KO
R3909 T5650 T5638 arg3Of reaching,enhanced
R3910 T5650 T5653 arg1Of reaching,at
R3911 T5652 T5650 arg2Of maximum,reaching
R3912 T5652 T5651 arg1Of maximum,a
R3913 T5656 T5653 arg2Of points,at
R3914 T5656 T5654 arg1Of points,earlier
R3915 T5656 T5655 arg1Of points,time
R3916 T5656 T5657 arg2Of points,compared
R3917 T5657 T5658 arg1Of compared,to
R3918 T5661 T5658 arg2Of cells,to
R3919 T5661 T5659 arg1Of cells,wild
R3920 T5661 T5660 arg1Of cells,type
R3921 T5661 T5662 arg1Of cells,(
R3922 T5664 T5662 arg2Of 1C,(
R3923 T5664 T5663 arg1Of 1C,figure
R3924 T5665 T5662 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4928 42-45 Protein denotes p65

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6689 42-45 http://www.uniprot.org/uniprot/P21579 denotes p65
T6687 42-45 http://www.uniprot.org/uniprot/Q04206 denotes p65

GO-CC

Id Subject Object Predicate Lexical cue
T4972 179-184 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4742 0-197 Sentence denotes Furthermore, nuclear translocation of the p65 NF-κB subunit was enhanced in poly(I:C) transfected A20myel-KO BMDM, reaching a maximum at earlier time points compared to wild type cells (figure 1C).
T85 0-197 Sentence denotes Furthermore, nuclear translocation of the p65 NF-κB subunit was enhanced in poly(I:C) transfected A20myel-KO BMDM, reaching a maximum at earlier time points compared to wild type cells (figure 1C).

simple1

Id Subject Object Predicate Lexical cue
T5066 42-45 Protein denotes p65

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7376 64-72 Positive_regulation denotes enhanced
T7375 21-34 Localization denotes translocation
T7325 42-45 Protein denotes p65
R5315 T7375 T7376 themeOf translocation,enhanced
R5272 T7325 T7375 themeOf p65,translocation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6732 42-45 Protein denotes p65
T6785 21-34 Localization denotes translocation
T6784 64-72 Positive_regulation denotes enhanced
R4933 T6732 T6785 themeOf p65,translocation
R4951 T6785 T6784 themeOf translocation,enhanced

DLUT931

Id Subject Object Predicate Lexical cue
T6962 64-72 Positive_regulation denotes enhanced
T6961 21-34 Localization denotes translocation
T6906 42-45 Protein denotes p65
R5021 T6906 T6961 themeOf p65,translocation
R5022 T6961 T6962 themeOf translocation,enhanced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7446 76-108 Entity denotes poly(I:C) transfected A20myel-KO
T7440 42-45 Protein denotes p65
T7430 166-196 Entity denotes to wild type cells (figure 1C)
T7399 35-59 Protein denotes of the p65 NF-κB subunit

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6448 196-197 . denotes .
T6447 195-196 -RRB- denotes )
T6446 193-195 NNP denotes 1C
T6445 186-192 NN denotes figure
T6444 185-186 -LRB- denotes (
T6443 179-184 NNS denotes cells
T6442 174-178 NN denotes type
T6441 169-173 JJ denotes wild
T6440 166-168 TO denotes to
T6439 157-165 VBN denotes compared
T6438 150-156 NNS denotes points
T6437 145-149 NN denotes time
T6436 137-144 JJR denotes earlier
T6435 134-136 IN denotes at
T6434 126-133 NN denotes maximum
T6433 124-125 DT denotes a
T6432 115-123 VBG denotes reaching
T6431 113-114 , denotes ,
T6430 109-113 NNP denotes BMDM
T6429 98-108 JJ denotes A20myel-KO
T6428 86-97 VBN denotes transfected
T6427 84-85 -RRB- denotes )
T6426 83-84 NNP denotes C
T6425 82-83 : denotes :
T6424 81-82 PRP denotes I
T6423 80-81 -LRB- denotes (
T6422 76-80 NN denotes poly
T6421 73-75 IN denotes in
T6420 64-72 VBN denotes enhanced
T6419 60-63 VBD denotes was
T6418 52-59 NN denotes subunit
T6417 46-51 NN denotes NF-κB
T6416 42-45 CD denotes p65
T6415 38-41 DT denotes the
T6414 35-37 IN denotes of
T6413 21-34 NN denotes translocation
T6412 13-20 JJ denotes nuclear
T6411 11-12 , denotes ,
T6410 0-11 RB denotes Furthermore
R4602 T6430 T6426 appos BMDM,C
R4607 T6431 T6426 punct ",",C
R4611 T6432 T6420 advcl reaching,enhanced
R4616 T6433 T6434 det a,maximum
R4620 T6434 T6432 dobj maximum,reaching
R4624 T6435 T6432 prep at,reaching
R4628 T6436 T6437 amod earlier,time
R4636 T6437 T6438 compound time,points
R4641 T6438 T6435 pobj points,at
R4645 T6439 T6420 prep compared,enhanced
R4649 T6440 T6439 prep to,compared
R4653 T6441 T6443 amod wild,cells
R4657 T6442 T6443 compound type,cells
R4661 T6443 T6440 pobj cells,to
R4663 T6444 T6446 punct (,1C
R4665 T6445 T6446 compound figure,1C
R4669 T6446 T6443 appos 1C,cells
R4673 T6447 T6420 punct ),enhanced
R4676 T6448 T6420 punct .,enhanced
R4690 T6410 T6420 advmod Furthermore,enhanced
R4691 T6411 T6420 punct ",",enhanced
R4693 T6412 T6413 amod nuclear,translocation
R4694 T6413 T6420 nsubjpass translocation,enhanced
R4696 T6414 T6413 prep of,translocation
R4697 T6415 T6418 det the,subunit
R4698 T6416 T6418 nummod p65,subunit
R4699 T6417 T6418 compound NF-κB,subunit
R4701 T6418 T6414 pobj subunit,of
R4702 T6419 T6420 auxpass was,enhanced
R4703 T6420 T6420 ROOT enhanced,enhanced
R4705 T6421 T6420 prep in,enhanced
R4706 T6422 T6421 pobj poly,in
R4707 T6423 T6426 punct (,C
R4709 T6424 T6426 nsubj I,C
R4710 T6425 T6426 punct :,C
R4711 T6426 T6420 parataxis C,enhanced
R4712 T6427 T6426 punct ),C
R4714 T6428 T6430 amod transfected,BMDM
R4715 T6429 T6430 compound A20myel-KO,BMDM

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7089 64-72 Positive_regulation denotes enhanced
T7088 64-72 Positive_regulation denotes enhanced
T7085 13-20 Entity denotes nuclear
T7084 49-51 Protein denotes κB
T7083 42-48 Protein denotes p65 NF
T7087 21-34 Localization denotes translocation
T7086 21-34 Localization denotes translocation
R5104 T7086 T7085 ToLoc translocation,nuclear
R5107 T7086 T7088 themeOf translocation,enhanced
R5110 T7087 T7085 ToLoc translocation,nuclear
R5111 T7087 T7089 themeOf translocation,enhanced
R5144 T7083 T7086 themeOf p65 NF,translocation
R5146 T7084 T7087 themeOf κB,translocation

testone

Id Subject Object Predicate Lexical cue
T4556 86-97 Gene_expression denotes transfected
T4555 64-72 Positive_regulation denotes enhanced
T4554 21-34 Localization denotes translocation
T4553 13-20 Entity denotes nuclear
T4506 42-45 Protein denotes p65
R3136 T4506 T4554 themeOf p65,translocation
R3159 T4553 T4554 locationOf nuclear,translocation
R3160 T4554 T4555 themeOf translocation,enhanced