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PMC:3291650 / 11126-11198 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T19322 54-59 Protein denotes RIG-I
T19321 23-27 Protein denotes IRF3
T19304 54-59 Protein denotes RIG-I
T19303 23-27 Protein denotes IRF3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19473 60-71 NN denotes stimulation
T19472 54-59 NN denotes RIG-I
T19471 51-53 TO denotes to
T19470 42-50 NN denotes response
T19469 39-41 IN denotes in
T19468 28-38 NN denotes activation
T19467 23-27 NN denotes IRF3
T19466 19-22 CC denotes and
T19465 13-18 NN denotes NF-κB
T19464 4-12 VB denotes inhibits
T19463 0-3 NN denotes A20
R14529 T19463 T19464 arg1Of A20,inhibits
R14530 T19465 T19466 arg1Of NF-κB,and
R14531 T19467 T19466 arg2Of IRF3,and
R14532 T19468 T19464 arg2Of activation,inhibits
R14533 T19468 T19465 arg1Of activation,NF-κB
R14534 T19468 T19467 arg1Of activation,IRF3
R14535 T19468 T19469 arg1Of activation,in
R14536 T19469 T19471 arg1Of in,to
R14537 T19470 T19469 arg2Of response,in
R14538 T19473 T19469 arg3Of stimulation,in
R14539 T19473 T19472 arg1Of stimulation,RIG-I

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19388 54-59 Protein denotes RIG-I
T19387 23-27 Protein denotes IRF3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19977 23-27 http://www.uniprot.org/uniprot/Q14653 denotes IRF3
T19975 0-3 http://www.uniprot.org/uniprot/P21580 denotes A20

GO-BP

Id Subject Object Predicate Lexical cue
T19406 4-18 http://purl.obolibrary.org/obo/GO_0007252 denotes inhibits NF-κB
T19405 4-18 http://purl.obolibrary.org/obo/GO_0032088 denotes inhibits NF-κB

sentences

Id Subject Object Predicate Lexical cue
T19347 0-72 Sentence denotes A20 inhibits NF-κB and IRF3 activation in response to RIG-I stimulation.

simple1

Id Subject Object Predicate Lexical cue
T19446 54-59 Protein denotes RIG-I
T19445 23-27 Protein denotes IRF3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20180 28-38 Positive_regulation denotes activation
T20179 4-12 Negative_regulation denotes inhibits
T20162 54-59 Protein denotes RIG-I
T20161 23-27 Protein denotes IRF3
R15123 T20161 T20180 themeOf IRF3,activation
R15130 T20180 T20179 themeOf activation,inhibits

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20016 4-12 Negative_regulation denotes inhibits
T20015 28-38 Positive_regulation denotes activation
T20014 42-50 Positive_regulation denotes response
T19997 54-59 Protein denotes RIG-I
T19996 23-27 Protein denotes IRF3
R15048 T19996 T20015 themeOf IRF3,activation
R15054 T20015 T20016 themeOf activation,inhibits
R15055 T20015 T20014 themeOf activation,response

DLUT931

Id Subject Object Predicate Lexical cue
T20064 4-12 Negative_regulation denotes inhibits
T20063 42-50 Positive_regulation denotes response
T20062 28-38 Positive_regulation denotes activation
T20045 54-59 Protein denotes RIG-I
T20044 23-27 Protein denotes IRF3
R15060 T20044 T20062 themeOf IRF3,activation
R15061 T20045 T20063 themeOf RIG-I,response
R15069 T20062 T20064 themeOf activation,inhibits
R15070 T20062 T20063 themeOf activation,response
R15071 T20063 T20062 themeOf response,activation
R15072 T20063 T20062 themeOf response,activation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T20223 54-71 Positive_regulation denotes RIG-I stimulation
T20220 23-38 Positive_regulation denotes IRF3 activation
T20208 54-59 Protein denotes RIG-I
T20204 23-27 Protein denotes IRF3
T20197 13-18 Protein denotes NF-κB
T20191 0-3 Protein denotes A20
R15132 T20204 T20220 themeOf IRF3,IRF3 activation
R15133 T20208 T20223 themeOf RIG-I,RIG-I stimulation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19723 71-72 . denotes .
T19722 60-71 NN denotes stimulation
T19721 54-59 NNP denotes RIG-I
T19720 51-53 TO denotes to
T19719 42-50 NN denotes response
T19718 39-41 IN denotes in
T19717 28-38 NN denotes activation
T19716 23-27 JJ denotes IRF3
T19715 19-22 CC denotes and
T19714 13-18 JJ denotes NF-κB
T19713 4-12 NNS denotes inhibits
T19712 0-3 CD denotes A20
R14785 T19712 T19713 nummod A20,inhibits
R14786 T19713 T19714 nsubj inhibits,NF-κB
R14787 T19714 T19717 amod NF-κB,activation
R14788 T19715 T19714 cc and,NF-κB
R14789 T19716 T19714 conj IRF3,NF-κB
R14790 T19717 T19717 ROOT activation,activation
R14791 T19718 T19717 prep in,activation
R14792 T19719 T19718 pobj response,in
R14793 T19720 T19719 prep to,response
R14794 T19721 T19722 compound RIG-I,stimulation
R14795 T19722 T19720 pobj stimulation,to
R14796 T19723 T19717 punct .,activation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T20078 4-12 Negative_regulation denotes inhibits
T20077 4-12 Negative_regulation denotes inhibits
T20076 28-38 Positive_regulation denotes activation
T20075 28-38 Positive_regulation denotes activation
T20074 54-59 Protein denotes RIG-I
T20073 23-27 Protein denotes IRF3
T20072 13-18 Protein denotes NF-κB
T20071 0-3 Protein denotes A20
R15073 T20072 T20075 themeOf NF-κB,activation
R15074 T20073 T20076 themeOf IRF3,activation
R15075 T20075 T20077 themeOf activation,inhibits
R15076 T20076 T20078 themeOf activation,inhibits
R15077 T20077 T20071 Cause inhibits,A20
R15078 T20078 T20071 Cause inhibits,A20

testone

Id Subject Object Predicate Lexical cue
T19279 54-59 Protein denotes RIG-I
T19278 23-27 Protein denotes IRF3