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PMC:329117 / 44113-44385 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T11963 0-272 sentence denotes A protein sequence alignment of intact mouse olfactory receptors was generated using CLUSTALW [50], edited by hand, and used to produce the phylogenetic tree shown in Figure 1 using PAUP's neighbor-joining algorithm (v4.0b6 Version 4, Sinauer Associates, Sunderland, MA).
T11964 1-2 DT denotes A
T11965 20-29 NN denotes alignment
T11966 3-10 NN denotes protein
T11967 11-19 NN denotes sequence
T11968 70-79 VBN denotes generated
T11969 30-32 IN denotes of
T11970 33-39 JJ denotes intact
T11971 56-65 NNS denotes receptors
T11972 40-45 NN denotes mouse
T11973 46-55 JJ denotes olfactory
T11974 66-69 VBD denotes was
T11975 80-85 VBG denotes using
T11976 86-94 NN denotes CLUSTALW
T11977 95-96 -LRB- denotes [
T11978 96-98 CD denotes 50
T11979 98-99 -RRB- denotes ]
T11980 99-101 , denotes ,
T11981 101-107 VBN denotes edited
T11982 108-110 IN denotes by
T11983 111-115 NN denotes hand
T11984 115-117 , denotes ,
T11985 117-120 CC denotes and
T11986 121-125 VBN denotes used
T11987 126-128 TO denotes to
T11988 129-136 VB denotes produce
T11989 137-140 DT denotes the
T11990 154-158 NN denotes tree
T11991 141-153 JJ denotes phylogenetic
T11992 159-164 VBN denotes shown
T11993 165-167 IN denotes in
T11994 168-174 NN denotes Figure
T11995 175-176 CD denotes 1
T11996 177-182 VBG denotes using
T11997 183-187 NN denotes PAUP
T11998 207-216 NN denotes algorithm
T11999 187-189 POS denotes 's
T12000 190-198 NN denotes neighbor
T12001 199-206 VBG denotes joining
T12002 198-199 HYPH denotes -
T12003 217-218 -LRB- denotes (
T12004 244-254 NNPS denotes Associates
T12005 218-224 NN denotes v4.0b6
T12006 225-232 NN denotes Version
T12007 233-234 CD denotes 4
T12008 234-236 , denotes ,
T12009 236-243 NNP denotes Sinauer
T12010 254-256 , denotes ,
T12011 256-266 NNP denotes Sunderland
T12012 266-268 , denotes ,
T12013 268-270 NNP denotes MA
T12014 270-271 -RRB- denotes )
T12015 271-272 . denotes .
R7585 T11964 T11965 det A,alignment
R7586 T11965 T11968 nsubjpass alignment,generated
R7587 T11966 T11967 compound protein,sequence
R7588 T11967 T11965 compound sequence,alignment
R7589 T11969 T11965 prep of,alignment
R7590 T11970 T11971 amod intact,receptors
R7591 T11971 T11969 pobj receptors,of
R7592 T11972 T11971 nmod mouse,receptors
R7593 T11973 T11971 amod olfactory,receptors
R7594 T11974 T11968 auxpass was,generated
R7595 T11975 T11968 advcl using,generated
R7596 T11976 T11975 dobj CLUSTALW,using
R7597 T11977 T11978 punct [,50
R7598 T11978 T11975 parataxis 50,using
R7599 T11979 T11978 punct ],50
R7600 T11980 T11968 punct ", ",generated
R7601 T11981 T11968 conj edited,generated
R7602 T11982 T11981 prep by,edited
R7603 T11983 T11982 pobj hand,by
R7604 T11984 T11981 punct ", ",edited
R7605 T11985 T11981 cc and,edited
R7606 T11986 T11981 conj used,edited
R7607 T11987 T11988 aux to,produce
R7608 T11988 T11986 advcl produce,used
R7609 T11989 T11990 det the,tree
R7610 T11990 T11988 dobj tree,produce
R7611 T11991 T11990 amod phylogenetic,tree
R7612 T11992 T11990 acl shown,tree
R7613 T11993 T11992 prep in,shown
R7614 T11994 T11993 pobj Figure,in
R7615 T11995 T11994 nummod 1,Figure
R7616 T11996 T11988 advcl using,produce
R7617 T11997 T11998 poss PAUP,algorithm
R7618 T11998 T11996 dobj algorithm,using
R7619 T11999 T11997 case 's,PAUP
R7620 T12000 T12001 npadvmod neighbor,joining
R7621 T12001 T11998 amod joining,algorithm
R7622 T12002 T12001 punct -,joining
R7623 T12003 T12004 punct (,Associates
R7624 T12004 T11988 parataxis Associates,produce
R7625 T12005 T12006 compound v4.0b6,Version
R7626 T12006 T12004 dep Version,Associates
R7627 T12007 T12006 nummod 4,Version
R7628 T12008 T12004 punct ", ",Associates
R7629 T12009 T12004 compound Sinauer,Associates
R7630 T12010 T12004 punct ", ",Associates
R7631 T12011 T12004 npadvmod Sunderland,Associates
R7632 T12012 T12004 punct ", ",Associates
R7633 T12013 T12004 npadvmod MA,Associates
R7634 T12014 T12004 punct ),Associates
R7635 T12015 T11968 punct .,generated

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11256 3-10 CHEBI_PR_EXT:protein denotes protein
T11257 11-19 SO_EXT:biological_sequence denotes sequence
T11258 40-45 NCBITaxon:10088 denotes mouse
T11259 46-55 GO:0007608 denotes olfactory
T11260 46-65 GO_EXT:0004984 denotes olfactory receptors

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11142 40-45 NCBITaxon:10088 denotes mouse
T11143 46-55 GO:0007608 denotes olfactory

2_test

Id Subject Object Predicate Lexical cue
14611657-7984417-44684102 95-97 7984417 denotes [5