PMC:329117 / 41135-41373 JSONTXT

{"project":"craft-sa-dev","denotations":[{"id":"T11369","span":{"begin":0,"end":238},"obj":"sentence"},{"id":"T11370","span":{"begin":1,"end":3},"obj":"PRP"},{"id":"T11371","span":{"begin":4,"end":11},"obj":"VBD"},{"id":"T11372","span":{"begin":165,"end":167},"obj":"VB"},{"id":"T11373","span":{"begin":12,"end":17},"obj":"NNS"},{"id":"T11374","span":{"begin":18,"end":22},"obj":"IN"},{"id":"T11375","span":{"begin":23,"end":24},"obj":"DT"},{"id":"T11376","span":{"begin":31,"end":35},"obj":"NN"},{"id":"T11377","span":{"begin":25,"end":30},"obj":"VBN"},{"id":"T11378","span":{"begin":36,"end":38},"obj":"IN"},{"id":"T11379","span":{"begin":39,"end":46},"obj":"VBG"},{"id":"T11380","span":{"begin":47,"end":58},"obj":"JJ"},{"id":"T11381","span":{"begin":75,"end":79},"obj":"NN"},{"id":"T11382","span":{"begin":59,"end":74},"obj":"NN"},{"id":"T11383","span":{"begin":80,"end":85},"obj":"NN"},{"id":"T11384","span":{"begin":86,"end":88},"obj":"IN"},{"id":"T11385","span":{"begin":113,"end":119},"obj":"VBD"},{"id":"T11386","span":{"begin":89,"end":90},"obj":"CD"},{"id":"T11387","span":{"begin":92,"end":95},"obj":"NN"},{"id":"T11388","span":{"begin":90,"end":91},"obj":"SYM"},{"id":"T11389","span":{"begin":96,"end":102},"obj":"NN"},{"id":"T11390","span":{"begin":103,"end":112},"obj":"NNS"},{"id":"T11391","span":{"begin":120,"end":122},"obj":"IN"},{"id":"T11392","span":{"begin":123,"end":125},"obj":"RB"},{"id":"T11393","span":{"begin":132,"end":135},"obj":"CD"},{"id":"T11394","span":{"begin":126,"end":131},"obj":"RBS"},{"id":"T11395","span":{"begin":136,"end":138},"obj":"NNS"},{"id":"T11396","span":{"begin":139,"end":140},"obj":":"},{"id":"T11397","span":{"begin":141,"end":148},"obj":"JJR"},{"id":"T11398","span":{"begin":149,"end":158},"obj":"NN"},{"id":"T11399","span":{"begin":159,"end":164},"obj":"MD"},{"id":"T11400","span":{"begin":168,"end":172},"obj":"JJ"},{"id":"T11401","span":{"begin":172,"end":174},"obj":","},{"id":"T11402","span":{"begin":174,"end":177},"obj":"CC"},{"id":"T11403","span":{"begin":178,"end":181},"obj":"MD"},{"id":"T11404","span":{"begin":186,"end":188},"obj":"VB"},{"id":"T11405","span":{"begin":182,"end":185},"obj":"RB"},{"id":"T11406","span":{"begin":189,"end":204},"obj":"JJ"},{"id":"T11407","span":{"begin":205,"end":209},"obj":"IN"},{"id":"T11408","span":{"begin":210,"end":215},"obj":"NN"},{"id":"T11409","span":{"begin":216,"end":218},"obj":"IN"},{"id":"T11410","span":{"begin":219,"end":222},"obj":"PRP$"},{"id":"T11411","span":{"begin":228,"end":237},"obj":"NNS"},{"id":"T11412","span":{"begin":223,"end":227},"obj":"NN"},{"id":"T11413","span":{"begin":237,"end":238},"obj":"."}],"relations":[{"id":"R7023","pred":"nsubj","subj":"T11370","obj":"T11371"},{"id":"R7024","pred":"ccomp","subj":"T11371","obj":"T11372"},{"id":"R7025","pred":"dobj","subj":"T11373","obj":"T11371"},{"id":"R7026","pred":"prep","subj":"T11374","obj":"T11373"},{"id":"R7027","pred":"det","subj":"T11375","obj":"T11376"},{"id":"R7028","pred":"pobj","subj":"T11376","obj":"T11374"},{"id":"R7029","pred":"amod","subj":"T11377","obj":"T11376"},{"id":"R7030","pred":"prep","subj":"T11378","obj":"T11371"},{"id":"R7031","pred":"pcomp","subj":"T11379","obj":"T11378"},{"id":"R7032","pred":"amod","subj":"T11380","obj":"T11381"},{"id":"R7033","pred":"compound","subj":"T11381","obj":"T11383"},{"id":"R7034","pred":"compound","subj":"T11382","obj":"T11381"},{"id":"R7035","pred":"dobj","subj":"T11383","obj":"T11379"},{"id":"R7036","pred":"mark","subj":"T11384","obj":"T11385"},{"id":"R7037","pred":"advcl","subj":"T11385","obj":"T11371"},{"id":"R7038","pred":"nummod","subj":"T11386","obj":"T11387"},{"id":"R7039","pred":"compound","subj":"T11387","obj":"T11389"},{"id":"R7040","pred":"punct","subj":"T11388","obj":"T11386"},{"id":"R7041","pred":"compound","subj":"T11389","obj":"T11390"},{"id":"R7042","pred":"nsubj","subj":"T11390","obj":"T11385"},{"id":"R7043","pred":"prep","subj":"T11391","obj":"T11385"},{"id":"R7044","pred":"advmod","subj":"T11392","obj":"T11393"},{"id":"R7045","pred":"nummod","subj":"T11393","obj":"T11395"},{"id":"R7046","pred":"advmod","subj":"T11394","obj":"T11393"},{"id":"R7047","pred":"pobj","subj":"T11395","obj":"T11391"},{"id":"R7048","pred":"punct","subj":"T11396","obj":"T11372"},{"id":"R7049","pred":"amod","subj":"T11397","obj":"T11398"},{"id":"R7050","pred":"nsubj","subj":"T11398","obj":"T11372"},{"id":"R7051","pred":"aux","subj":"T11399","obj":"T11372"},{"id":"R7052","pred":"acomp","subj":"T11400","obj":"T11372"},{"id":"R7053","pred":"punct","subj":"T11401","obj":"T11372"},{"id":"R7054","pred":"cc","subj":"T11402","obj":"T11372"},{"id":"R7055","pred":"aux","subj":"T11403","obj":"T11404"},{"id":"R7056","pred":"conj","subj":"T11404","obj":"T11372"},{"id":"R7057","pred":"neg","subj":"T11405","obj":"T11404"},{"id":"R7058","pred":"acomp","subj":"T11406","obj":"T11404"},{"id":"R7059","pred":"prep","subj":"T11407","obj":"T11406"},{"id":"R7060","pred":"pobj","subj":"T11408","obj":"T11407"},{"id":"R7061","pred":"prep","subj":"T11409","obj":"T11404"},{"id":"R7062","pred":"poss","subj":"T11410","obj":"T11411"},{"id":"R7063","pred":"pobj","subj":"T11411","obj":"T11409"},{"id":"R7064","pred":"compound","subj":"T11412","obj":"T11411"},{"id":"R7065","pred":"punct","subj":"T11413","obj":"T11372"}],"text":" We counted cDNAs from a given gene as showing alternative polyadenylation site usage if 3' UTR length estimates varied by at least 400 bp - smaller variation could be real, but may not be distinguishable from error in our size estimates."}

{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T11165","span":{"begin":12,"end":17},"obj":"SO_EXT:cDNA"},{"id":"T11166","span":{"begin":31,"end":35},"obj":"SO_EXT:0000704"},{"id":"T11167","span":{"begin":59,"end":74},"obj":"GO:0043631"},{"id":"T11168","span":{"begin":59,"end":79},"obj":"SO_EXT:0000553"},{"id":"T11169","span":{"begin":89,"end":95},"obj":"SO_EXT:0000205"},{"id":"T11170","span":{"begin":136,"end":138},"obj":"SO_EXT:0000028"},{"id":"T11171","span":{"begin":149,"end":158},"obj":"SO_EXT:sequence_variation_entity_or_quality"}],"text":" We counted cDNAs from a given gene as showing alternative polyadenylation site usage if 3' UTR length estimates varied by at least 400 bp - smaller variation could be real, but may not be distinguishable from error in our size estimates."}

{"project":"craft-ca-core-dev","denotations":[{"id":"T11096","span":{"begin":31,"end":35},"obj":"SO:0000704"},{"id":"T11097","span":{"begin":59,"end":74},"obj":"GO:0043631"},{"id":"T11098","span":{"begin":59,"end":79},"obj":"SO:0000553"},{"id":"T11099","span":{"begin":89,"end":95},"obj":"SO:0000205"},{"id":"T11100","span":{"begin":136,"end":138},"obj":"SO:0000028"}],"text":" We counted cDNAs from a given gene as showing alternative polyadenylation site usage if 3' UTR length estimates varied by at least 400 bp - smaller variation could be real, but may not be distinguishable from error in our size estimates."}