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PMC:329117 / 35095-36753 JSONTXT

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Id Subject Object Predicate Lexical cue
T9853 0-3 PRP$ denotes Our
T9854 4-9 NN denotes study
T9855 10-15 VBZ denotes shows
T9856 16-20 IN denotes that
T9857 71-74 VB denotes fit
T9858 21-26 IN denotes about
T9859 27-28 CD denotes 5
T9860 28-29 NN denotes %
T9861 30-32 IN denotes of
T9862 33-42 JJ denotes olfactory
T9863 43-51 NN denotes receptor
T9864 52-63 NNS denotes transcripts
T9865 64-66 VBP denotes do
T9866 67-70 RB denotes not
T9867 75-78 DT denotes the
T9868 87-93 NN denotes notion
T9869 79-86 JJ denotes current
T9870 94-96 IN denotes of
T9871 97-106 JJ denotes olfactory
T9872 107-115 NN denotes receptor
T9873 116-120 NN denotes gene
T9874 121-130 NN denotes structure
T9875 130-131 . denotes .
T9876 131-201 sentence denotes Occasionally, an intron is spliced out of the 3' untranslated region.
T9877 132-144 RB denotes Occasionally
T9878 159-166 VBN denotes spliced
T9879 144-146 , denotes ,
T9880 146-148 DT denotes an
T9881 149-155 NN denotes intron
T9882 156-158 VBZ denotes is
T9883 167-170 IN denotes out
T9884 171-173 IN denotes of
T9885 174-177 DT denotes the
T9886 194-200 NN denotes region
T9887 178-179 CD denotes 3
T9888 179-180 SYM denotes '
T9889 181-193 JJ denotes untranslated
T9890 200-201 . denotes .
T9891 201-381 sentence denotes A number of cDNAs use splice sites within the olfactory receptor's ORF, meaning that their protein product is different from that predicted on the basis of genomic sequence alone.
T9892 202-203 DT denotes A
T9893 204-210 NN denotes number
T9894 220-223 VBP denotes use
T9895 211-213 IN denotes of
T9896 214-219 NNS denotes cDNAs
T9897 224-230 NN denotes splice
T9898 231-236 NNS denotes sites
T9899 237-243 IN denotes within
T9900 244-247 DT denotes the
T9901 258-266 NN denotes receptor
T9902 248-257 JJ denotes olfactory
T9903 269-272 NN denotes ORF
T9904 266-268 POS denotes 's
T9905 272-274 , denotes ,
T9906 274-281 VBG denotes meaning
T9907 282-286 IN denotes that
T9908 309-311 VBZ denotes is
T9909 287-292 PRP$ denotes their
T9910 301-308 NN denotes product
T9911 293-300 NN denotes protein
T9912 312-321 JJ denotes different
T9913 322-326 IN denotes from
T9914 327-331 DT denotes that
T9915 332-341 VBN denotes predicted
T9916 342-344 IN denotes on
T9917 345-348 DT denotes the
T9918 349-354 NN denotes basis
T9919 355-357 IN denotes of
T9920 358-365 JJ denotes genomic
T9921 366-374 NN denotes sequence
T9922 375-380 RB denotes alone
T9923 380-381 . denotes .
T9924 381-634 sentence denotes In two such cases, the transcript would encode a functional olfactory receptor, with the initiating methionine and first few amino acids encoded by an upstream exon, as has been observed previously for a subtelomeric human olfactory receptor gene [25].
T9925 382-384 IN denotes In
T9926 422-428 VB denotes encode
T9927 385-388 CD denotes two
T9928 394-399 NNS denotes cases
T9929 389-393 JJ denotes such
T9930 399-401 , denotes ,
T9931 401-404 DT denotes the
T9932 405-415 NN denotes transcript
T9933 416-421 MD denotes would
T9934 429-430 DT denotes a
T9935 452-460 NN denotes receptor
T9936 431-441 JJ denotes functional
T9937 442-451 JJ denotes olfactory
T9938 460-462 , denotes ,
T9939 462-466 IN denotes with
T9940 519-526 VBN denotes encoded
T9941 467-470 DT denotes the
T9942 482-492 NN denotes methionine
T9943 471-481 VBG denotes initiating
T9944 493-496 CC denotes and
T9945 497-502 JJ denotes first
T9946 513-518 NNS denotes acids
T9947 503-506 JJ denotes few
T9948 507-512 NN denotes amino
T9949 527-529 IN denotes by
T9950 530-532 DT denotes an
T9951 542-546 NN denotes exon
T9952 533-541 JJ denotes upstream
T9953 546-548 , denotes ,
T9954 548-550 IN denotes as
T9955 560-568 VBN denotes observed
T9956 551-554 VBZ denotes has
T9957 555-559 VBN denotes been
T9958 569-579 RB denotes previously
T9959 580-583 IN denotes for
T9960 584-585 DT denotes a
T9961 624-628 NN denotes gene
T9962 586-598 JJ denotes subtelomeric
T9963 599-604 JJ denotes human
T9964 605-614 JJ denotes olfactory
T9965 615-623 NN denotes receptor
T9966 629-630 -LRB- denotes [
T9967 630-632 CD denotes 25
T9968 632-633 -RRB- denotes ]
T9969 633-634 . denotes .
T9970 634-833 sentence denotes Such within-ORF splicing might increase protein-coding diversity, although, given the small number of genes involved, splicing is unlikely to significantly affect the functional receptor repertoire.
T9971 635-639 JJ denotes Such
T9972 651-659 NN denotes splicing
T9973 640-646 IN denotes within
T9974 646-647 HYPH denotes -
T9975 647-650 NN denotes ORF
T9976 666-674 VB denotes increase
T9977 660-665 MD denotes might
T9978 675-682 NN denotes protein
T9979 683-689 VBG denotes coding
T9980 682-683 HYPH denotes -
T9981 690-699 NN denotes diversity
T9982 699-701 , denotes ,
T9983 701-709 IN denotes although
T9984 762-764 VBZ denotes is
T9985 709-711 , denotes ,
T9986 711-716 VBN denotes given
T9987 717-720 DT denotes the
T9988 727-733 NN denotes number
T9989 721-726 JJ denotes small
T9990 734-736 IN denotes of
T9991 737-742 NNS denotes genes
T9992 743-751 VBN denotes involved
T9993 751-753 , denotes ,
T9994 753-761 NN denotes splicing
T9995 765-773 JJ denotes unlikely
T9996 774-776 TO denotes to
T9997 791-797 VB denotes affect
T9998 777-790 RB denotes significantly
T9999 798-801 DT denotes the
T10000 822-832 NN denotes repertoire
T10001 802-812 JJ denotes functional
T10002 813-821 NN denotes receptor
T10003 832-833 . denotes .
T10004 833-1052 sentence denotes Most of the atypical splice forms we observe appear to encode non-functional transcripts, containing frameshifts or lacking a start codon or other functional residues conserved throughout the olfactory receptor family.
T10005 834-838 JJS denotes Most
T10006 879-885 VBP denotes appear
T10007 839-841 IN denotes of
T10008 842-845 DT denotes the
T10009 862-867 NNS denotes forms
T10010 846-854 JJ denotes atypical
T10011 855-861 NN denotes splice
T10012 868-870 PRP denotes we
T10013 871-878 VBP denotes observe
T10014 886-888 TO denotes to
T10015 889-895 VB denotes encode
T10016 896-910 JJ denotes non-functional
T10017 911-922 NNS denotes transcripts
T10018 922-924 , denotes ,
T10019 924-934 VBG denotes containing
T10020 935-946 NNS denotes frameshifts
T10021 947-949 CC denotes or
T10022 950-957 VBG denotes lacking
T10023 958-959 DT denotes a
T10024 966-971 NN denotes codon
T10025 960-965 NN denotes start
T10026 972-974 CC denotes or
T10027 975-980 JJ denotes other
T10028 992-1000 NNS denotes residues
T10029 981-991 JJ denotes functional
T10030 1001-1010 VBN denotes conserved
T10031 1011-1021 IN denotes throughout
T10032 1022-1025 DT denotes the
T10033 1045-1051 NN denotes family
T10034 1026-1035 JJ denotes olfactory
T10035 1036-1044 NN denotes receptor
T10036 1051-1052 . denotes .
T10037 1052-1215 sentence denotes These nonfunctional transcripts are probably aberrant by-products of the splicing system [43] that have not yet been degraded by RNA surveillance systems [40,41].
T10038 1053-1058 DT denotes These
T10039 1073-1084 NNS denotes transcripts
T10040 1059-1072 JJ denotes nonfunctional
T10041 1085-1088 VBP denotes are
T10042 1089-1097 RB denotes probably
T10043 1098-1106 JJ denotes aberrant
T10044 1110-1118 NNS denotes products
T10045 1107-1109 NN denotes by
T10046 1109-1110 HYPH denotes -
T10047 1119-1121 IN denotes of
T10048 1122-1125 DT denotes the
T10049 1135-1141 NN denotes system
T10050 1126-1134 NN denotes splicing
T10051 1142-1143 -LRB- denotes [
T10052 1143-1145 CD denotes 43
T10053 1145-1146 -RRB- denotes ]
T10054 1147-1151 WDT denotes that
T10055 1170-1178 VBN denotes degraded
T10056 1152-1156 VBP denotes have
T10057 1157-1160 RB denotes not
T10058 1161-1164 RB denotes yet
T10059 1165-1169 VBN denotes been
T10060 1179-1181 IN denotes by
T10061 1182-1185 NN denotes RNA
T10062 1199-1206 NNS denotes systems
T10063 1186-1198 NN denotes surveillance
T10064 1207-1208 -LRB- denotes [
T10065 1211-1213 CD denotes 41
T10066 1208-1210 CD denotes 40
T10067 1210-1211 , denotes ,
T10068 1213-1214 -RRB- denotes ]
T10069 1214-1215 . denotes .
T10070 1215-1369 sentence denotes The neurons expressing these aberrant transcripts might also make normal transcripts for the same genes and thus produce a functional olfactory receptor.
T10071 1216-1219 DT denotes The
T10072 1220-1227 NNS denotes neurons
T10073 1277-1281 VB denotes make
T10074 1228-1238 VBG denotes expressing
T10075 1239-1244 DT denotes these
T10076 1254-1265 NNS denotes transcripts
T10077 1245-1253 JJ denotes aberrant
T10078 1266-1271 MD denotes might
T10079 1272-1276 RB denotes also
T10080 1282-1288 JJ denotes normal
T10081 1289-1300 NNS denotes transcripts
T10082 1301-1304 IN denotes for
T10083 1305-1308 DT denotes the
T10084 1314-1319 NNS denotes genes
T10085 1309-1313 JJ denotes same
T10086 1320-1323 CC denotes and
T10087 1324-1328 RB denotes thus
T10088 1329-1336 VB denotes produce
T10089 1337-1338 DT denotes a
T10090 1360-1368 NN denotes receptor
T10091 1339-1349 JJ denotes functional
T10092 1350-1359 JJ denotes olfactory
T10093 1368-1369 . denotes .
T10094 1369-1658 sentence denotes Alternatively, the unusual transcriptional regulation of olfactory receptors might ensure that only one splice isoform is expressed per cell (unlikely, but possible if an RNA-based feedback mechanism operates), thus condemning cells expressing these aberrant isoforms to be dysfunctional.
T10095 1370-1383 RB denotes Alternatively
T10096 1453-1459 VB denotes ensure
T10097 1383-1385 , denotes ,
T10098 1385-1388 DT denotes the
T10099 1413-1423 NN denotes regulation
T10100 1389-1396 JJ denotes unusual
T10101 1397-1412 JJ denotes transcriptional
T10102 1424-1426 IN denotes of
T10103 1427-1436 JJ denotes olfactory
T10104 1437-1446 NNS denotes receptors
T10105 1447-1452 MD denotes might
T10106 1460-1464 IN denotes that
T10107 1492-1501 VBN denotes expressed
T10108 1465-1469 RB denotes only
T10109 1481-1488 NN denotes isoform
T10110 1470-1473 CD denotes one
T10111 1474-1480 NN denotes splice
T10112 1489-1491 VBZ denotes is
T10113 1502-1505 IN denotes per
T10114 1506-1510 NN denotes cell
T10115 1511-1512 -LRB- denotes (
T10116 1512-1520 JJ denotes unlikely
T10117 1520-1522 , denotes ,
T10118 1522-1525 CC denotes but
T10119 1526-1534 JJ denotes possible
T10120 1535-1537 IN denotes if
T10121 1570-1578 VBZ denotes operates
T10122 1538-1540 DT denotes an
T10123 1560-1569 NN denotes mechanism
T10124 1541-1544 NN denotes RNA
T10125 1545-1550 VBN denotes based
T10126 1544-1545 HYPH denotes -
T10127 1551-1559 NN denotes feedback
T10128 1578-1579 -RRB- denotes )
T10129 1579-1581 , denotes ,
T10130 1581-1585 RB denotes thus
T10131 1586-1596 VBG denotes condemning
T10132 1597-1602 NNS denotes cells
T10133 1641-1643 VB denotes be
T10134 1603-1613 VBG denotes expressing
T10135 1614-1619 DT denotes these
T10136 1629-1637 NNS denotes isoforms
T10137 1620-1628 JJ denotes aberrant
T10138 1638-1640 TO denotes to
T10139 1644-1657 JJ denotes dysfunctional
T10140 1657-1658 . denotes .
R5901 T9853 T9854 poss Our,study
R5902 T9854 T9855 nsubj study,shows
R5903 T9856 T9857 mark that,fit
R5904 T9857 T9855 ccomp fit,shows
R5905 T9858 T9859 quantmod about,5
R5906 T9859 T9860 nummod 5,%
R5907 T9860 T9857 nsubj %,fit
R5909 T9861 T9860 prep of,%
R5911 T9862 T9863 amod olfactory,receptor
R5914 T9863 T9864 compound receptor,transcripts
R5917 T9864 T9861 pobj transcripts,of
R5922 T9865 T9857 aux do,fit
R5925 T9866 T9857 neg not,fit
R5927 T9867 T9868 det the,notion
R5928 T9868 T9857 dobj notion,fit
R5931 T9869 T9868 amod current,notion
R5935 T9870 T9868 prep of,notion
R5941 T9871 T9872 amod olfactory,receptor
R5945 T9872 T9873 compound receptor,gene
R5948 T9873 T9874 compound gene,structure
R5950 T9874 T9870 pobj structure,of
R5952 T9875 T9855 punct .,shows
R5956 T9877 T9878 advmod Occasionally,spliced
R5961 T9879 T9878 punct ", ",spliced
R5965 T9880 T9881 det an,intron
R5969 T9881 T9878 nsubjpass intron,spliced
R5972 T9882 T9878 auxpass is,spliced
R5976 T9883 T9878 prep out,spliced
R5979 T9884 T9883 prep of,out
R5983 T9885 T9886 det the,region
R5986 T9886 T9884 pobj region,of
R5989 T9887 T9886 nummod 3,region
R5994 T9888 T9887 punct ',3
R5998 T9889 T9886 amod untranslated,region
R6001 T9890 T9878 punct .,spliced
R6005 T9892 T9893 det A,number
R6009 T9893 T9894 nsubj number,use
R6014 T9895 T9893 prep of,number
R6019 T9896 T9895 pobj cDNAs,of
R6021 T9897 T9898 compound splice,sites
R6024 T9898 T9894 dobj sites,use
R6028 T9899 T9898 prep within,sites
R6032 T9900 T9901 det the,receptor
R6035 T9901 T9903 poss receptor,ORF
R6038 T9902 T9901 amod olfactory,receptor
R6040 T9903 T9899 pobj ORF,within
R6046 T9904 T9901 case 's,receptor
R6048 T9905 T9894 punct ", ",use
R6049 T9906 T9894 advcl meaning,use
R6050 T9907 T9908 mark that,is
R6051 T9908 T9906 ccomp is,meaning
R6052 T9909 T9910 poss their,product
R6053 T9910 T9908 nsubj product,is
R6054 T9948 T9946 compound amino,acids
R6055 T9949 T9940 agent by,encoded
R6056 T9911 T9910 compound protein,product
R6057 T9950 T9951 det an,exon
R6058 T9951 T9949 pobj exon,by
R6059 T9912 T9908 acomp different,is
R6060 T9952 T9951 amod upstream,exon
R6061 T9953 T9926 punct ", ",encode
R6062 T9954 T9955 mark as,observed
R6063 T9913 T9912 prep from,different
R6064 T9955 T9926 advcl observed,encode
R6065 T9956 T9955 aux has,observed
R6066 T9914 T9913 pobj that,from
R6067 T9957 T9955 auxpass been,observed
R6068 T9958 T9955 advmod previously,observed
R6069 T9915 T9914 acl predicted,that
R6070 T9959 T9955 prep for,observed
R6071 T9960 T9961 det a,gene
R6072 T9961 T9959 pobj gene,for
R6073 T9916 T9915 prep on,predicted
R6074 T9962 T9961 amod subtelomeric,gene
R6075 T9963 T9961 amod human,gene
R6076 T9964 T9965 amod olfactory,receptor
R6077 T9917 T9918 det the,basis
R6078 T9965 T9961 compound receptor,gene
R6079 T9966 T9967 punct [,25
R6080 T9918 T9916 pobj basis,on
R6081 T9967 T9926 parataxis 25,encode
R6082 T9968 T9967 punct ],25
R6083 T9969 T9926 punct .,encode
R6084 T9919 T9918 prep of,basis
R6085 T9971 T9972 amod Such,splicing
R6086 T9972 T9976 nsubj splicing,increase
R6087 T9920 T9921 amod genomic,sequence
R6088 T9973 T9972 nmod within,splicing
R6089 T9974 T9973 punct -,within
R6090 T9975 T9973 pobj ORF,within
R6091 T9921 T9919 pobj sequence,of
R6092 T9977 T9976 aux might,increase
R6093 T9978 T9979 npadvmod protein,coding
R6094 T9979 T9981 amod coding,diversity
R6095 T9980 T9979 punct -,coding
R6096 T9981 T9976 dobj diversity,increase
R6097 T9982 T9976 punct ", ",increase
R6098 T9922 T9921 advmod alone,sequence
R6099 T9983 T9984 mark although,is
R6100 T9984 T9976 advcl is,increase
R6101 T9985 T9984 punct ", ",is
R6102 T9923 T9894 punct .,use
R6103 T9986 T9984 prep given,is
R6104 T9987 T9988 det the,number
R6105 T9988 T9986 pobj number,given
R6106 T9925 T9926 prep In,encode
R6107 T9989 T9988 amod small,number
R6108 T9990 T9988 prep of,number
R6109 T9991 T9990 pobj genes,of
R6110 T9992 T9988 acl involved,number
R6111 T9993 T9984 punct ", ",is
R6112 T9927 T9928 nummod two,cases
R6113 T9994 T9984 nsubj splicing,is
R6114 T9995 T9984 acomp unlikely,is
R6115 T9996 T9997 aux to,affect
R6116 T9997 T9995 xcomp affect,unlikely
R6117 T9928 T9925 pobj cases,In
R6118 T9998 T9997 advmod significantly,affect
R6119 T9999 T10000 det the,repertoire
R6120 T10000 T9997 dobj repertoire,affect
R6121 T10001 T10000 amod functional,repertoire
R6122 T9929 T9928 amod such,cases
R6123 T10002 T10000 compound receptor,repertoire
R6124 T10003 T9976 punct .,increase
R6125 T9930 T9926 punct ", ",encode
R6126 T10005 T10006 nsubj Most,appear
R6127 T10007 T10005 prep of,Most
R6128 T9931 T9932 det the,transcript
R6129 T10008 T10009 det the,forms
R6130 T9932 T9926 nsubj transcript,encode
R6131 T9933 T9926 aux would,encode
R6132 T10009 T10007 pobj forms,of
R6133 T9934 T9935 det a,receptor
R6134 T10010 T10009 amod atypical,forms
R6135 T10011 T10009 compound splice,forms
R6136 T10012 T10013 nsubj we,observe
R6137 T9935 T9926 dobj receptor,encode
R6138 T10013 T10009 advcl observe,forms
R6139 T10014 T10015 aux to,encode
R6140 T10015 T10006 xcomp encode,appear
R6141 T9936 T9935 amod functional,receptor
R6142 T10016 T10017 amod non-functional,transcripts
R6143 T10017 T10015 dobj transcripts,encode
R6144 T9937 T9935 amod olfactory,receptor
R6145 T10018 T10017 punct ", ",transcripts
R6146 T10019 T10017 acl containing,transcripts
R6147 T10020 T10019 dobj frameshifts,containing
R6148 T10021 T10019 cc or,containing
R6149 T10022 T10019 conj lacking,containing
R6150 T9938 T9926 punct ", ",encode
R6151 T10023 T10024 det a,codon
R6152 T10024 T10022 dobj codon,lacking
R6153 T10025 T10024 compound start,codon
R6154 T9939 T9940 mark with,encoded
R6155 T10026 T10024 cc or,codon
R6156 T10027 T10028 amod other,residues
R6157 T10028 T10024 conj residues,codon
R6158 T9940 T9926 advcl encoded,encode
R6159 T10029 T10028 amod functional,residues
R6160 T10030 T10028 acl conserved,residues
R6161 T10031 T10030 prep throughout,conserved
R6162 T9941 T9942 det the,methionine
R6163 T10032 T10033 det the,family
R6164 T10033 T10031 pobj family,throughout
R6165 T10034 T10035 amod olfactory,receptor
R6166 T9942 T9940 nsubj methionine,encoded
R6167 T10035 T10033 compound receptor,family
R6168 T10036 T10006 punct .,appear
R6169 T9943 T9942 amod initiating,methionine
R6170 T10038 T10039 det These,transcripts
R6171 T10039 T10041 nsubj transcripts,are
R6172 T9944 T9942 cc and,methionine
R6173 T10040 T10039 amod nonfunctional,transcripts
R6174 T10042 T10041 advmod probably,are
R6175 T9945 T9946 amod first,acids
R6176 T10043 T10044 amod aberrant,products
R6177 T10044 T10041 attr products,are
R6178 T10045 T10044 compound by,products
R6179 T9946 T9942 conj acids,methionine
R6180 T10046 T10044 punct -,products
R6181 T10047 T10044 prep of,products
R6182 T10048 T10049 det the,system
R6183 T9947 T9946 amod few,acids
R6184 T10049 T10047 pobj system,of
R6185 T10050 T10049 compound splicing,system
R6186 T10051 T10052 punct [,43
R6187 T10054 T10055 dep that,degraded
R6188 T10052 T10044 parataxis 43,products
R6189 T10053 T10052 punct ],43
R6190 T10055 T10044 relcl degraded,products
R6191 T10056 T10055 aux have,degraded
R6192 T10057 T10055 neg not,degraded
R6193 T10058 T10055 advmod yet,degraded
R6196 T10059 T10055 auxpass been,degraded
R6202 T10060 T10055 agent by,degraded
R6206 T10061 T10062 compound RNA,systems
R6209 T10062 T10060 pobj systems,by
R6213 T10063 T10062 compound surveillance,systems
R6216 T10064 T10065 punct [,41
R6219 T10065 T10055 parataxis 41,degraded
R6221 T10066 T10065 nummod 40,41
R6223 T10067 T10065 punct ",",41
R6226 T10068 T10065 punct ],41
R6230 T10069 T10041 punct .,are
R6233 T10071 T10072 det The,neurons
R6242 T10074 T10072 acl expressing,neurons
R6247 T10075 T10076 det these,transcripts
R6250 T10076 T10074 dobj transcripts,expressing
R6256 T10077 T10076 amod aberrant,transcripts
R6260 T10078 T10073 aux might,make
R6263 T10079 T10073 advmod also,make
R6265 T10080 T10081 amod normal,transcripts
R6269 T10081 T10073 dobj transcripts,make
R6273 T10082 T10073 prep for,make
R6276 T10083 T10084 det the,genes
R6280 T10084 T10082 pobj genes,for
R6284 T10085 T10084 amod same,genes
R6287 T10086 T10073 cc and,make
R6291 T10087 T10088 advmod thus,produce
R6295 T10088 T10073 conj produce,make
R6299 T10089 T10090 det a,receptor
R6306 T10090 T10088 dobj receptor,produce
R6310 T10091 T10090 amod functional,receptor
R6314 T10092 T10090 amod olfactory,receptor
R6317 T10093 T10073 punct .,make
R6320 T10095 T10096 advmod Alternatively,ensure
R6324 T10097 T10096 punct ", ",ensure
R6328 T10098 T10099 det the,regulation
R6330 T10099 T10096 nsubj regulation,ensure
R6331 T10100 T10099 amod unusual,regulation
R6332 T10101 T10099 amod transcriptional,regulation
R6333 T10102 T10099 prep of,regulation
R6334 T10103 T10104 amod olfactory,receptors
R6335 T10104 T10102 pobj receptors,of
R6337 T10105 T10096 aux might,ensure
R6340 T10106 T10107 mark that,expressed
R6343 T10107 T10096 ccomp expressed,ensure
R6347 T10108 T10109 advmod only,isoform
R6350 T10109 T10107 nsubjpass isoform,expressed
R6354 T10110 T10109 nummod one,isoform
R6360 T10111 T10109 compound splice,isoform
R6365 T10112 T10107 auxpass is,expressed
R6368 T10113 T10107 prep per,expressed
R6373 T10114 T10113 pobj cell,per
R6376 T10115 T10116 punct (,unlikely
R6380 T10116 T10107 parataxis unlikely,expressed
R6383 T10117 T10116 punct ", ",unlikely
R6384 T10118 T10116 cc but,unlikely
R6385 T10119 T10116 conj possible,unlikely
R6387 T10120 T10121 mark if,operates
R6390 T10121 T10116 advcl operates,unlikely
R6393 T10122 T10123 det an,mechanism
R6397 T10123 T10121 nsubj mechanism,operates
R6401 T10124 T10125 npadvmod RNA,based
R6405 T10125 T10123 amod based,mechanism
R6410 T10126 T10125 punct -,based
R6411 T10127 T10123 compound feedback,mechanism
R6412 T10128 T10116 punct ),unlikely
R6413 T10129 T10107 punct ", ",expressed
R6414 T10130 T10131 advmod thus,condemning
R6415 T10131 T10107 advcl condemning,expressed
R6416 T10132 T10133 nsubj cells,be
R6417 T10133 T10131 ccomp be,condemning
R6418 T10134 T10132 acl expressing,cells
R6419 T10135 T10136 det these,isoforms
R6420 T10136 T10134 dobj isoforms,expressing
R6421 T10137 T10136 amod aberrant,isoforms
R6422 T10138 T10133 aux to,be
R6423 T10139 T10133 acomp dysfunctional,be
R6424 T10140 T10096 punct .,ensure
R6238 T10072 T10073 nsubj neurons,make

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8555 33-42 GO:0007608 denotes olfactory
T8556 33-51 GO_EXT:0004984 denotes olfactory receptor
T8557 52-63 SO_EXT:0000673 denotes transcripts
T8558 97-106 GO:0007608 denotes olfactory
T8559 97-115 GO_EXT:0004984 denotes olfactory receptor
T8560 116-120 SO_EXT:0000704 denotes gene
T8561 149-155 SO_EXT:0000188 denotes intron
T8562 159-166 GO:0008380 denotes spliced
T8563 178-200 SO_EXT:0000205 denotes 3' untranslated region
T8564 183-193 GO:0006412 denotes translated
T8565 214-219 SO_EXT:cDNA denotes cDNAs
T8566 224-230 GO:0008380 denotes splice
T8567 224-236 SO_EXT:0000162 denotes splice sites
T8568 248-257 GO:0007608 denotes olfactory
T8569 248-266 GO_EXT:0004984 denotes olfactory receptor
T8570 269-272 SO_EXT:0000236 denotes ORF
T8571 293-300 CHEBI_PR_EXT:protein denotes protein
T8572 358-365 SO_EXT:0001026 denotes genomic
T8573 366-374 SO_EXT:biological_sequence denotes sequence
T8574 405-415 SO_EXT:0000673 denotes transcript
T8575 422-428 SO_EXT:sequence_coding_function denotes encode
T8576 442-451 GO:0007608 denotes olfactory
T8577 442-460 GO_EXT:0004984 denotes olfactory receptor
T8578 482-492 CHEBI_SO_EXT:methionine denotes methionine
T8579 507-518 CHEBI_SO_EXT:amino_acid denotes amino acids
T8580 519-526 SO_EXT:sequence_coding_function denotes encoded
T8581 533-541 SO_EXT:sequence_upstreamness denotes upstream
T8582 542-546 SO_EXT:0000147 denotes exon
T8583 589-598 GO_SO_EXT:telomere_or_telomeric_region_or_telomeric_orientation denotes telomeric
T8584 599-604 NCBITaxon:9606 denotes human
T8585 605-614 GO:0007608 denotes olfactory
T8586 605-623 GO_EXT:0004984 denotes olfactory receptor
T8587 624-628 SO_EXT:0000704 denotes gene
T8588 647-650 SO_EXT:0000236 denotes ORF
T8589 651-659 GO:0008380 denotes splicing
T8590 675-682 CHEBI_PR_EXT:protein denotes protein
T8591 675-689 SO:0000010 denotes protein-coding
T8592 737-742 SO_EXT:0000704 denotes genes
T8593 753-761 GO:0008380 denotes splicing
T8594 813-821 GO_EXT:0004872 denotes receptor
T8595 855-861 GO:0008380 denotes splice
T8596 855-867 SO_EXT:alternative_splice_variant denotes splice forms
T8597 889-895 SO_EXT:sequence_coding_function denotes encode
T8598 911-922 SO_EXT:0000673 denotes transcripts
T8599 935-946 GO_SO_EXT:frameshift_entity_or_process denotes frameshifts
T8600 960-971 SO_EXT:0000318 denotes start codon
T8601 992-1000 CHEBI_EXT:residue denotes residues
T8602 1001-1010 SO_EXT:biological_conservation_process_or_quality denotes conserved
T8603 1026-1035 GO:0007608 denotes olfactory
T8604 1026-1044 GO_EXT:0004984 denotes olfactory receptor
T8605 1073-1084 SO_EXT:0000673 denotes transcripts
T8606 1126-1134 GO:0008380 denotes splicing
T8607 1182-1185 CHEBI_SO_EXT:RNA denotes RNA
T8608 1186-1198 GO:0065007 denotes surveillance
T8609 1220-1227 CL:0000540 denotes neurons
T8610 1228-1238 GO:0010467 denotes expressing
T8611 1254-1265 SO_EXT:0000673 denotes transcripts
T8612 1289-1300 SO_EXT:0000673 denotes transcripts
T8613 1314-1319 SO_EXT:0000704 denotes genes
T8614 1350-1359 GO:0007608 denotes olfactory
T8615 1350-1368 GO_EXT:0004984 denotes olfactory receptor
T8616 1397-1412 GO_EXT:transcription denotes transcriptional
T8617 1413-1423 GO:0065007 denotes regulation
T8618 1427-1436 GO:0007608 denotes olfactory
T8619 1427-1446 GO_EXT:0004984 denotes olfactory receptors
T8620 1474-1480 GO:0008380 denotes splice
T8621 1474-1488 SO_EXT:alternative_splice_variant denotes splice isoform
T8622 1492-1501 GO:0010467 denotes expressed
T8623 1506-1510 CL_GO_EXT:cell denotes cell
T8624 1541-1544 CHEBI_SO_EXT:RNA denotes RNA
T8625 1597-1602 CL_GO_EXT:cell denotes cells
T8626 1603-1613 GO:0010467 denotes expressing
T8627 1629-1637 SO_EXT:0001060 denotes isoforms

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8214 33-42 GO:0007608 denotes olfactory
T8215 52-63 SO:0000673 denotes transcripts
T8216 97-106 GO:0007608 denotes olfactory
T8217 116-120 SO:0000704 denotes gene
T8218 149-155 SO:0000188 denotes intron
T8219 159-166 GO:0008380 denotes spliced
T8220 178-200 SO:0000205 denotes 3' untranslated region
T8221 183-193 GO:0006412 denotes translated
T8222 224-230 GO:0008380 denotes splice
T8223 224-236 SO:0000162 denotes splice sites
T8224 248-257 GO:0007608 denotes olfactory
T8225 269-272 SO:0000236 denotes ORF
T8226 358-365 SO:0001026 denotes genomic
T8227 405-415 SO:0000673 denotes transcript
T8228 442-451 GO:0007608 denotes olfactory
T8229 542-546 SO:0000147 denotes exon
T8230 599-604 NCBITaxon:9606 denotes human
T8231 605-614 GO:0007608 denotes olfactory
T8232 624-628 SO:0000704 denotes gene
T8233 647-650 SO:0000236 denotes ORF
T8234 651-659 GO:0008380 denotes splicing
T8235 675-689 SO:0000010 denotes protein-coding
T8236 737-742 SO:0000704 denotes genes
T8237 753-761 GO:0008380 denotes splicing
T8238 855-861 GO:0008380 denotes splice
T8239 911-922 SO:0000673 denotes transcripts
T8240 960-971 SO:0000318 denotes start codon
T8241 1026-1035 GO:0007608 denotes olfactory
T8242 1073-1084 SO:0000673 denotes transcripts
T8243 1126-1134 GO:0008380 denotes splicing
T8244 1186-1198 GO:0065007 denotes surveillance
T8245 1220-1227 CL:0000540 denotes neurons
T8246 1228-1238 GO:0010467 denotes expressing
T8247 1254-1265 SO:0000673 denotes transcripts
T8248 1289-1300 SO:0000673 denotes transcripts
T8249 1314-1319 SO:0000704 denotes genes
T8250 1350-1359 GO:0007608 denotes olfactory
T8251 1413-1423 GO:0065007 denotes regulation
T8252 1427-1436 GO:0007608 denotes olfactory
T8253 1474-1480 GO:0008380 denotes splice
T8254 1492-1501 GO:0010467 denotes expressed
T8255 1603-1613 GO:0010467 denotes expressing
T8256 1629-1637 SO:0001060 denotes isoforms

2_test

Id Subject Object Predicate Lexical cue
14611657-11689484-44684090 630-632 11689484 denotes 25
14611657-12466287-44684091 1143-1145 12466287 denotes 43
14611657-11207359-44684092 1208-1210 11207359 denotes 40
14611657-11283721-44684093 1211-1213 11283721 denotes 41