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PMC:3279418 / 9794-9996 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3511 8-10 IN denotes of
T3512 11-25 JJ denotes co-stimulatory
T3513 26-35 NN denotes molecules
T3514 36-40 NN denotes CD40
T3515 40-41 -COMMA- denotes ,
T3516 42-46 NN denotes CD80
T3517 46-47 -COMMA- denotes ,
T3518 48-51 CC denotes and
T3519 52-56 NN denotes CD86
T3520 58-61 DT denotes The
T3521 62-66 NN denotes TLR3
T3522 67-73 NN denotes ligand
T3523 74-78 NN denotes poly
T3524 79-80 NN denotes I
T3525 80-81 -COLON- denotes :
T3526 81-82 NN denotes C
T3527 83-86 CC denotes and
T3528 87-90 DT denotes the
T3529 91-95 NN denotes TLR4
T3530 96-102 NN denotes ligand
T3531 103-106 NN denotes LPS
T3532 107-111 DT denotes each
T3533 112-120 VB denotes activate
T3534 121-132 VB denotes overlapping
T3535 133-136 CC denotes but
T3536 137-146 JJ denotes different
T3537 147-156 NN denotes signaling
T3538 157-165 NN denotes pathways
T3539 166-169 CC denotes and
T3540 170-174 VB denotes were
T3541 175-179 VB denotes used
T3542 180-182 TO denotes to
T3543 183-189 VB denotes induce
T3544 190-192 NN denotes DC
R2947 T3514 T3515 arg1Of CD40,","
R2948 T3515 T3518 arg1Of ",",and
R2949 T3516 T3515 arg2Of CD80,","
R2950 T3518 T3511 arg2Of and,of
R2951 T3518 T3512 arg1Of and,co-stimulatory
R2952 T3518 T3513 arg1Of and,molecules
R2953 T3518 T3517 arg1Of and,","
R2954 T3519 T3518 arg2Of CD86,and
R2955 T3524 T3521 arg1Of I,TLR3
R2956 T3524 T3522 arg1Of I,ligand
R2957 T3524 T3523 arg1Of I,poly
R2958 T3524 T3525 arg1Of I,:
R2959 T3526 T3520 arg1Of C,The
R2960 T3526 T3524 arg1Of C,I
R2961 T3526 T3527 arg1Of C,and
R2962 T3527 T3533 arg1Of and,activate
R2963 T3527 T3540 arg1Of and,were
R2964 T3527 T3541 arg2Of and,used
R2965 T3531 T3527 arg2Of LPS,and
R2966 T3531 T3528 arg1Of LPS,the
R2967 T3531 T3529 arg1Of LPS,TLR4
R2968 T3531 T3530 arg1Of LPS,ligand
R2969 T3533 T3532 arg1Of activate,each
R2970 T3533 T3539 arg1Of activate,and
R2971 T3534 T3535 arg1Of overlapping,but
R2972 T3536 T3535 arg2Of different,but
R2973 T3538 T3533 arg2Of pathways,activate
R2974 T3538 T3534 arg1Of pathways,overlapping
R2975 T3538 T3536 arg1Of pathways,different
R2976 T3538 T3537 arg1Of pathways,signaling
R2979 T3541 T3539 arg2Of used,and
R2980 T3541 T3540 arg2Of used,were
R2981 T3543 T3541 arg3Of induce,used
R2982 T3543 T3542 arg1Of induce,to

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3137 8-10 IN denotes of
T3138 11-25 JJ denotes co-stimulatory
T3139 26-35 NNS denotes molecules
T3140 36-40 NNP denotes CD40
T3141 40-41 , denotes ,
T3142 42-46 NNP denotes CD80
T3143 46-47 , denotes ,
T3144 48-51 CC denotes and
T3145 52-56 NNP denotes CD86
T3146 56-57 . denotes .
T3147 58-61 DT denotes The
T3148 62-66 CD denotes TLR3
T3149 67-73 NN denotes ligand
T3150 74-78 NN denotes poly
T3151 79-80 PRP denotes I
T3152 80-81 : denotes :
T3153 81-82 NNP denotes C
T3154 83-86 CC denotes and
T3155 87-90 DT denotes the
T3156 91-95 CD denotes TLR4
T3157 96-102 NN denotes ligand
T3158 103-106 NNP denotes LPS
T3159 107-111 DT denotes each
T3160 112-120 VBP denotes activate
T3161 121-132 VBG denotes overlapping
T3162 133-136 CC denotes but
T3163 137-146 JJ denotes different
T3164 147-156 VBG denotes signaling
T3165 157-165 NNS denotes pathways
T3166 166-169 CC denotes and
T3167 170-174 VBD denotes were
T3168 175-179 VBN denotes used
T3169 180-182 TO denotes to
T3170 183-189 VB denotes induce
T3171 190-192 NNP denotes DC
R2583 T3138 T3139 amod co-stimulatory,molecules
R2584 T3139 T3137 pobj molecules,of
R2586 T3141 T3140 punct ",",CD40
R2587 T3142 T3140 conj CD80,CD40
R2588 T3143 T3142 punct ",",CD80
R2589 T3144 T3142 cc and,CD80
R2590 T3145 T3142 conj CD86,CD80
R2592 T3147 T3150 det The,poly
R2593 T3148 T3150 nummod TLR3,poly
R2594 T3149 T3150 compound ligand,poly
R2595 T3150 T3160 nsubj poly,activate
R2596 T3151 T3153 nsubj I,C
R2597 T3152 T3153 punct :,C
R2598 T3153 T3150 appos C,poly
R2599 T3154 T3153 cc and,C
R2600 T3155 T3158 det the,LPS
R2601 T3156 T3158 nummod TLR4,LPS
R2602 T3157 T3158 compound ligand,LPS
R2603 T3158 T3153 conj LPS,C
R2604 T3159 T3160 dep each,activate
R2605 T3160 T3160 ROOT activate,activate
R2606 T3161 T3160 xcomp overlapping,activate
R2607 T3162 T3160 cc but,activate
R2608 T3163 T3165 amod different,pathways
R2609 T3164 T3165 compound signaling,pathways
R2610 T3165 T3160 dobj pathways,activate
R2611 T3166 T3160 cc and,activate
R2612 T3167 T3168 auxpass were,used
R2613 T3168 T3160 conj used,activate
R2614 T3169 T3170 aux to,induce
R2615 T3170 T3168 xcomp induce,used

GO-BP

Id Subject Object Predicate Lexical cue
T3646 147-156 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T3647 147-165 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways

GO-MF

Id Subject Object Predicate Lexical cue
T3648 67-73 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand
T3649 96-102 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand

events-check-again

Id Subject Object Predicate Lexical cue
T3746 36-40 Protein denotes CD40
T3747 42-46 Protein denotes CD80
T3748 52-56 Protein denotes CD86
T3749 62-66 Protein denotes TLR3
T3750 67-73 Binding denotes ligand
T3751 91-95 Protein denotes TLR4
T3752 96-102 Binding denotes ligand
R3095 T3749 T3750 themeOf TLR3,ligand
R3096 T3751 T3752 themeOf TLR4,ligand

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3256 67-73 Binding denotes ligand
T3257 96-102 Binding denotes ligand
T3264 36-40 Protein denotes CD40
T3265 42-46 Protein denotes CD80
T3266 52-56 Protein denotes CD86
T3267 62-66 Protein denotes TLR3
T3268 91-95 Protein denotes TLR4
R2696 T3267 T3256 themeOf TLR3,ligand
R2697 T3268 T3257 themeOf TLR4,ligand

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3623 36-40 P25942 denotes CD40
T3624 42-46 P33681 denotes CD80
T3625 52-56 P42081 denotes CD86
T3626 62-66 O15455 denotes TLR3
T3627 91-95 O00206 denotes TLR4

test2

Id Subject Object Predicate Lexical cue Negation
T2850 36-40 Protein denotes CD40
T2851 42-46 Protein denotes CD80 true
T2852 52-56 Protein denotes CD86
T2853 62-66 Protein denotes TLR3 true
T2854 91-95 Protein denotes TLR4
T2855 96-102 Binding denotes ligand
R2322 T2853 T2855 themeOf TLR3,ligand
R2323 T2854 T2855 themeOf TLR4,ligand