PMC:3279418 / 5509-5677
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2594 | 0-3 | DT | denotes | The |
T2595 | 4-14 | JJ | denotes | endogenous |
T2596 | 15-25 | NN | denotes | expression |
T2597 | 26-28 | IN | denotes | of |
T2598 | 29-36 | NN | denotes | Sharpin |
T2599 | 37-41 | NN | denotes | mRNA |
T2600 | 42-44 | IN | denotes | in |
T2601 | 45-49 | NN | denotes | BMDC |
T2602 | 50-53 | VB | denotes | was |
T2603 | 54-64 | VB | denotes | determined |
T2604 | 65-67 | IN | denotes | by |
T2605 | 68-80 | JJ | denotes | quantitative |
T2606 | 81-85 | JJ | denotes | real |
T2607 | 86-94 | NN | denotes | time-PCR |
T2608 | 95-96 | -LRB- | denotes | ( |
T2609 | 96-103 | NN | denotes | qRT-PCR |
T2610 | 103-104 | -RRB- | denotes | ) |
T2611 | 105-114 | VB | denotes | following |
T2612 | 115-122 | NN | denotes | culture |
T2613 | 123-125 | IN | denotes | in |
T2614 | 126-132 | NN | denotes | medium |
T2615 | 133-137 | RB | denotes | only |
T2616 | 138-140 | CC | denotes | or |
T2617 | 141-146 | IN | denotes | after |
T2618 | 147-158 | NN | denotes | stimulation |
T2619 | 159-163 | IN | denotes | with |
T2620 | 164-167 | NN | denotes | LPS |
R2171 | T2596 | T2594 | arg1Of | expression,The |
R2172 | T2596 | T2595 | arg1Of | expression,endogenous |
R2173 | T2596 | T2597 | arg1Of | expression,of |
R2174 | T2596 | T2600 | arg1Of | expression,in |
R2175 | T2596 | T2602 | arg1Of | expression,was |
R2176 | T2596 | T2603 | arg2Of | expression,determined |
R2177 | T2599 | T2597 | arg2Of | mRNA,of |
R2178 | T2599 | T2598 | arg1Of | mRNA,Sharpin |
R2179 | T2601 | T2600 | arg2Of | BMDC,in |
R2180 | T2603 | T2602 | arg2Of | determined,was |
R2181 | T2603 | T2611 | arg1Of | determined,following |
R2182 | T2603 | T2613 | arg1Of | determined,in |
R2183 | T2607 | T2603 | arg1Of | time-PCR,determined |
R2184 | T2607 | T2604 | arg2Of | time-PCR,by |
R2185 | T2607 | T2605 | arg1Of | time-PCR,quantitative |
R2186 | T2607 | T2606 | arg1Of | time-PCR,real |
R2187 | T2607 | T2608 | arg1Of | time-PCR,( |
R2188 | T2609 | T2608 | arg2Of | qRT-PCR,( |
R2189 | T2610 | T2608 | arg3Of | ),( |
R2190 | T2612 | T2611 | arg2Of | culture,following |
R2191 | T2614 | T2613 | arg2Of | medium,in |
R2192 | T2615 | T2616 | arg1Of | only,or |
R2193 | T2616 | T2613 | arg3Of | or,in |
R2194 | T2617 | T2616 | arg2Of | after,or |
R2195 | T2618 | T2617 | arg2Of | stimulation,after |
R2196 | T2618 | T2619 | arg1Of | stimulation,with |
R2197 | T2620 | T2619 | arg2Of | LPS,with |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2363 | 0-3 | DT | denotes | The |
T2364 | 4-14 | JJ | denotes | endogenous |
T2365 | 15-25 | NN | denotes | expression |
T2366 | 26-28 | IN | denotes | of |
T2367 | 29-36 | NNP | denotes | Sharpin |
T2368 | 37-41 | NNP | denotes | mRNA |
T2369 | 42-44 | IN | denotes | in |
T2370 | 45-49 | NNP | denotes | BMDC |
T2371 | 50-53 | VBD | denotes | was |
T2372 | 54-64 | VBN | denotes | determined |
T2373 | 65-67 | IN | denotes | by |
T2374 | 68-80 | JJ | denotes | quantitative |
T2375 | 81-85 | JJ | denotes | real |
T2376 | 86-94 | NN | denotes | time-PCR |
T2377 | 95-96 | -LRB- | denotes | ( |
T2378 | 96-103 | NNP | denotes | qRT-PCR |
T2379 | 103-104 | -RRB- | denotes | ) |
T2380 | 105-114 | JJ | denotes | following |
T2381 | 115-122 | NN | denotes | culture |
T2382 | 123-125 | IN | denotes | in |
T2383 | 126-132 | NN | denotes | medium |
T2384 | 133-137 | RB | denotes | only |
T2385 | 138-140 | CC | denotes | or |
T2386 | 141-146 | RB | denotes | after |
T2387 | 147-158 | NN | denotes | stimulation |
T2388 | 159-163 | IN | denotes | with |
T2389 | 164-167 | NNP | denotes | LPS |
T2390 | 167-168 | . | denotes | . |
R1943 | T2363 | T2365 | det | The,expression |
R1944 | T2364 | T2365 | amod | endogenous,expression |
R1945 | T2365 | T2372 | nsubjpass | expression,determined |
R1946 | T2366 | T2365 | prep | of,expression |
R1947 | T2367 | T2368 | compound | Sharpin,mRNA |
R1948 | T2368 | T2366 | pobj | mRNA,of |
R1949 | T2369 | T2368 | prep | in,mRNA |
R1950 | T2370 | T2369 | pobj | BMDC,in |
R1951 | T2371 | T2372 | auxpass | was,determined |
R1952 | T2372 | T2372 | ROOT | determined,determined |
R1953 | T2373 | T2372 | agent | by,determined |
R1954 | T2374 | T2376 | amod | quantitative,time-PCR |
R1955 | T2375 | T2376 | amod | real,time-PCR |
R1956 | T2376 | T2373 | pobj | time-PCR,by |
R1957 | T2377 | T2376 | punct | (,time-PCR |
R1958 | T2378 | T2376 | appos | qRT-PCR,time-PCR |
R1959 | T2379 | T2376 | punct | ),time-PCR |
R1960 | T2380 | T2372 | prep | following,determined |
R1961 | T2381 | T2380 | pobj | culture,following |
R1962 | T2382 | T2380 | prep | in,following |
R1963 | T2383 | T2382 | pobj | medium,in |
R1964 | T2384 | T2388 | advmod | only,with |
R1965 | T2385 | T2384 | cc | or,only |
R1966 | T2386 | T2384 | conj | after,only |
R1967 | T2387 | T2386 | pobj | stimulation,after |
R1968 | T2388 | T2380 | prep | with,following |
R1969 | T2389 | T2388 | pobj | LPS,with |
R1970 | T2390 | T2380 | punct | .,following |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2222 | 0-168 | Sentence | denotes | The endogenous expression of Sharpin mRNA in BMDC was determined by quantitative real time-PCR (qRT-PCR) following culture in medium only or after stimulation with LPS. |
T37 | 0-168 | Sentence | denotes | The endogenous expression of Sharpin mRNA in BMDC was determined by quantitative real time-PCR (qRT-PCR) following culture in medium only or after stimulation with LPS. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2760 | 15-25 | Transcription | denotes | expression |
T2761 | 29-36 | Protein | denotes | Sharpin |
R2278 | T2761 | T2760 | themeOf | Sharpin,expression |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2781 | 29-36 | Protein | denotes | Sharpin |
T2782 | 15-25 | Transcription | denotes | expression |
R2288 | T2781 | T2782 | themeOf | Sharpin,expression |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2206 | 15-25 | Transcription | denotes | expression |
T2207 | 29-36 | Protein | denotes | Sharpin |
R1800 | T2207 | T2206 | themeOf | Sharpin,expression |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2694 | 29-36 | Q9H0F6 | denotes | Sharpin |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2190 | 15-25 | Gene_expression | denotes | expression |
T2191 | 29-36 | Protein | denotes | Sharpin |
R1796 | T2191 | T2190 | themeOf | Sharpin,expression |