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PMC:3279418 / 5272-5508 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22348129-8362989-89575673 233-234 8362989 denotes 3
T81551 233-234 8362989 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2555 0-11 JJ denotes Spontaneous
T2556 12-21 NN denotes mutations
T2557 22-24 IN denotes in
T2558 25-28 DT denotes the
T2559 29-34 NN denotes mouse
T2560 35-42 NN denotes Sharpin
T2561 43-47 NN denotes gene
T2562 48-55 VB denotes results
T2563 56-58 IN denotes in
T2564 59-60 DT denotes a
T2565 61-68 JJ denotes complex
T2566 69-81 JJ denotes inflammatory
T2567 82-91 NN denotes phenotype
T2568 92-105 VB denotes characterized
T2569 106-108 IN denotes by
T2570 109-115 JJ denotes severe
T2571 116-126 NN denotes dermatitis
T2572 127-128 -LRB- denotes (
T2573 128-132 NN denotes Fig.
T2574 133-135 NN denotes 1B
T2575 135-136 -RRB- denotes )
T2576 136-137 -COMMA- denotes ,
T2577 138-146 JJ denotes systemic
T2578 147-159 NN denotes inflammation
T2579 160-163 CC denotes and
T2580 164-166 DT denotes an
T2581 167-175 JJ denotes enlarged
T2582 176-182 NN denotes spleen
T2583 183-184 -LRB- denotes (
T2584 184-188 NN denotes Fig.
T2585 189-191 NN denotes 1C
T2586 191-192 -RRB- denotes )
T2587 193-199 VB denotes caused
T2588 200-202 IN denotes by
T2589 203-217 JJ denotes extramedullary
T2590 218-231 NN denotes hematopoiesis
T2591 232-233 -LRB- denotes [
T2592 233-234 CD denotes 3
T2593 234-235 -RRB- denotes ]
R2133 T2556 T2555 arg1Of mutations,Spontaneous
R2134 T2556 T2557 arg1Of mutations,in
R2135 T2556 T2562 arg1Of mutations,results
R2136 T2561 T2557 arg2Of gene,in
R2137 T2561 T2558 arg1Of gene,the
R2138 T2561 T2559 arg1Of gene,mouse
R2139 T2561 T2560 arg1Of gene,Sharpin
R2140 T2562 T2563 arg1Of results,in
R2141 T2566 T2565 arg1Of inflammatory,complex
R2142 T2567 T2563 arg2Of phenotype,in
R2143 T2567 T2564 arg1Of phenotype,a
R2144 T2567 T2566 arg1Of phenotype,inflammatory
R2145 T2567 T2568 arg2Of phenotype,characterized
R2146 T2571 T2570 arg1Of dermatitis,severe
R2147 T2571 T2572 arg1Of dermatitis,(
R2148 T2571 T2576 arg1Of dermatitis,","
R2149 T2574 T2572 arg2Of 1B,(
R2150 T2574 T2573 arg1Of 1B,Fig.
R2151 T2575 T2572 arg3Of ),(
R2152 T2576 T2579 arg1Of ",",and
R2153 T2578 T2576 arg2Of inflammation,","
R2154 T2578 T2577 arg1Of inflammation,systemic
R2155 T2579 T2568 arg1Of and,characterized
R2156 T2579 T2569 arg2Of and,by
R2157 T2582 T2579 arg2Of spleen,and
R2158 T2582 T2580 arg1Of spleen,an
R2159 T2582 T2581 arg1Of spleen,enlarged
R2160 T2582 T2583 arg1Of spleen,(
R2161 T2582 T2587 arg2Of spleen,caused
R2162 T2585 T2583 arg2Of 1C,(
R2163 T2585 T2584 arg1Of 1C,Fig.
R2164 T2586 T2583 arg3Of ),(
R2165 T2590 T2587 arg1Of hematopoiesis,caused
R2166 T2590 T2588 arg2Of hematopoiesis,by
R2167 T2590 T2589 arg1Of hematopoiesis,extramedullary
R2168 T2590 T2591 arg1Of hematopoiesis,[
R2169 T2592 T2591 arg2Of 3,[
R2170 T2593 T2591 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2323 0-11 JJ denotes Spontaneous
T2324 12-21 NNS denotes mutations
T2325 22-24 IN denotes in
T2326 25-28 DT denotes the
T2327 29-34 NN denotes mouse
T2328 35-42 NNP denotes Sharpin
T2329 43-47 NN denotes gene
T2330 48-55 NNS denotes results
T2331 56-58 IN denotes in
T2332 59-60 DT denotes a
T2333 61-68 JJ denotes complex
T2334 69-81 JJ denotes inflammatory
T2335 82-91 NN denotes phenotype
T2336 92-105 VBN denotes characterized
T2337 106-108 IN denotes by
T2338 109-115 JJ denotes severe
T2339 116-126 NNS denotes dermatitis
T2340 127-128 -LRB- denotes (
T2341 128-132 NNP denotes Fig.
T2342 133-135 NNP denotes 1B
T2343 135-136 -RRB- denotes )
T2344 136-137 , denotes ,
T2345 138-146 JJ denotes systemic
T2346 147-159 NN denotes inflammation
T2347 160-163 CC denotes and
T2348 164-166 DT denotes an
T2349 167-175 JJ denotes enlarged
T2350 176-182 NN denotes spleen
T2351 183-184 -LRB- denotes (
T2352 184-188 NNP denotes Fig.
T2353 189-191 NNP denotes 1C
T2354 191-192 -RRB- denotes )
T2355 193-199 VBN denotes caused
T2356 200-202 IN denotes by
T2357 203-217 JJ denotes extramedullary
T2358 218-231 NN denotes hematopoiesis
T2359 232-233 NN denotes [
T2360 233-234 CD denotes 3
T2361 234-235 NNP denotes ]
T2362 235-236 . denotes .
R1903 T2323 T2324 amod Spontaneous,mutations
R1904 T2324 T2324 ROOT mutations,mutations
R1905 T2325 T2324 prep in,mutations
R1906 T2326 T2330 det the,results
R1907 T2327 T2329 compound mouse,gene
R1908 T2328 T2329 compound Sharpin,gene
R1909 T2329 T2330 compound gene,results
R1910 T2330 T2325 pobj results,in
R1911 T2331 T2324 prep in,mutations
R1912 T2332 T2335 det a,phenotype
R1913 T2333 T2335 amod complex,phenotype
R1914 T2334 T2335 amod inflammatory,phenotype
R1915 T2335 T2331 pobj phenotype,in
R1916 T2336 T2335 acl characterized,phenotype
R1917 T2337 T2336 agent by,characterized
R1918 T2338 T2339 amod severe,dermatitis
R1919 T2339 T2337 pobj dermatitis,by
R1920 T2340 T2342 punct (,1B
R1921 T2341 T2342 compound Fig.,1B
R1922 T2342 T2339 appos 1B,dermatitis
R1923 T2343 T2339 punct ),dermatitis
R1924 T2344 T2339 punct ",",dermatitis
R1925 T2345 T2346 amod systemic,inflammation
R1926 T2346 T2339 conj inflammation,dermatitis
R1927 T2347 T2346 cc and,inflammation
R1928 T2348 T2350 det an,spleen
R1929 T2349 T2350 amod enlarged,spleen
R1930 T2350 T2346 conj spleen,inflammation
R1931 T2351 T2350 punct (,spleen
R1932 T2352 T2353 compound Fig.,1C
R1933 T2353 T2350 appos 1C,spleen
R1934 T2354 T2350 punct ),spleen
R1935 T2355 T2346 acl caused,inflammation
R1936 T2356 T2355 agent by,caused
R1937 T2357 T2359 amod extramedullary,[
R1938 T2358 T2359 compound hematopoiesis,[
R1939 T2359 T2361 nmod [,]
R1940 T2360 T2359 nummod 3,[
R1941 T2361 T2356 pobj ],by
R1942 T2362 T2324 punct .,mutations

UBERON-AE

Id Subject Object Predicate Lexical cue
T2198 176-182 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen

GO-BP

Id Subject Object Predicate Lexical cue
T2708 147-159 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T2709 218-231 http://purl.obolibrary.org/obo/GO_0030097 denotes hematopoiesis

sentences

Id Subject Object Predicate Lexical cue
T2221 0-236 Sentence denotes Spontaneous mutations in the mouse Sharpin gene results in a complex inflammatory phenotype characterized by severe dermatitis (Fig. 1B), systemic inflammation and an enlarged spleen (Fig. 1C) caused by extramedullary hematopoiesis [3].
T36 0-236 Sentence denotes Spontaneous mutations in the mouse Sharpin gene results in a complex inflammatory phenotype characterized by severe dermatitis (Fig. 1B), systemic inflammation and an enlarged spleen (Fig. 1C) caused by extramedullary hematopoiesis [3].

ICD10

Id Subject Object Predicate Lexical cue
T2711 116-126 http://purl.bioontology.org/ontology/ICD10/L30.9 denotes dermatitis

events-check-again

Id Subject Object Predicate Lexical cue
T2758 12-21 Negative_regulation denotes mutations
T2759 35-42 Protein denotes Sharpin
R2277 T2759 T2758 themeOf Sharpin,mutations

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2780 35-47 Protein denotes Sharpin gene

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T2204 12-21 Negative_regulation denotes mutations
T2205 35-42 Protein denotes Sharpin
R1799 T2205 T2204 themeOf Sharpin,mutations

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2693 35-42 Q9H0F6 denotes Sharpin

test2

Id Subject Object Predicate Lexical cue
T2189 35-42 Protein denotes Sharpin