PMC:3279418 / 4253-4434 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3279418","sourcedb":"PMC","sourceid":"3279418","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3279418","text":"ported here found that lack of SHARPIN protein in BMDC caused defective expression of pro-inflammatory mediators and impaired NF-κB activation upon ligand stimulation. The ability o","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T1888","span":{"begin":7,"end":11},"obj":"RB"},{"id":"T1889","span":{"begin":12,"end":17},"obj":"VB"},{"id":"T1890","span":{"begin":18,"end":22},"obj":"IN"},{"id":"T1891","span":{"begin":23,"end":27},"obj":"NN"},{"id":"T1892","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T1893","span":{"begin":31,"end":38},"obj":"NN"},{"id":"T1894","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T1895","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T1896","span":{"begin":50,"end":54},"obj":"NN"},{"id":"T1897","span":{"begin":55,"end":61},"obj":"VB"},{"id":"T1898","span":{"begin":62,"end":71},"obj":"JJ"},{"id":"T1899","span":{"begin":72,"end":82},"obj":"NN"},{"id":"T1900","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T1901","span":{"begin":86,"end":102},"obj":"JJ"},{"id":"T1902","span":{"begin":103,"end":112},"obj":"NN"},{"id":"T1903","span":{"begin":113,"end":116},"obj":"CC"},{"id":"T1904","span":{"begin":117,"end":125},"obj":"JJ"},{"id":"T1905","span":{"begin":126,"end":131},"obj":"NN"},{"id":"T1906","span":{"begin":132,"end":142},"obj":"NN"},{"id":"T1907","span":{"begin":143,"end":147},"obj":"IN"},{"id":"T1908","span":{"begin":148,"end":154},"obj":"NN"},{"id":"T1909","span":{"begin":155,"end":166},"obj":"NN"},{"id":"T1910","span":{"begin":168,"end":171},"obj":"DT"},{"id":"T1911","span":{"begin":172,"end":179},"obj":"NN"}],"relations":[{"id":"R1641","pred":"arg2Of","subj":"T1902","obj":"T1900"},{"id":"R1642","pred":"arg1Of","subj":"T1902","obj":"T1901"},{"id":"R1644","pred":"arg2Of","subj":"T1903","obj":"T1897"},{"id":"R1646","pred":"arg2Of","subj":"T1906","obj":"T1903"},{"id":"R1647","pred":"arg1Of","subj":"T1906","obj":"T1904"},{"id":"R1648","pred":"arg1Of","subj":"T1906","obj":"T1905"},{"id":"R1649","pred":"arg1Of","subj":"T1906","obj":"T1907"},{"id":"R1653","pred":"arg2Of","subj":"T1909","obj":"T1907"},{"id":"R1654","pred":"arg1Of","subj":"T1909","obj":"T1908"},{"id":"R1657","pred":"arg1Of","subj":"T1911","obj":"T1910"},{"id":"R1680","pred":"arg1Of","subj":"T1891","obj":"T1892"},{"id":"R1689","pred":"arg1Of","subj":"T1891","obj":"T1897"},{"id":"R1690","pred":"arg2Of","subj":"T1894","obj":"T1892"},{"id":"R1700","pred":"arg1Of","subj":"T1894","obj":"T1893"},{"id":"R1701","pred":"arg1Of","subj":"T1894","obj":"T1895"},{"id":"R1702","pred":"arg2Of","subj":"T1896","obj":"T1895"},{"id":"R1707","pred":"arg2Of","subj":"T1897","obj":"T1889"},{"id":"R1713","pred":"arg1Of","subj":"T1897","obj":"T1890"},{"id":"R1716","pred":"arg1Of","subj":"T1899","obj":"T1898"},{"id":"R1720","pred":"arg1Of","subj":"T1899","obj":"T1900"},{"id":"R1721","pred":"arg1Of","subj":"T1899","obj":"T1903"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T1888","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1889","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1890","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1891","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1892","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1893","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1894","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1895","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1896","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1897","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1898","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1899","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1900","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1901","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1902","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1903","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1904","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1905","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1906","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1907","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1908","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1909","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1910","pred":"source","obj":"pmc-enju-pas"},{"subj":"T1911","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1064","span":{"begin":7,"end":11},"obj":"RB"},{"id":"T1065","span":{"begin":12,"end":17},"obj":"VBN"},{"id":"T1066","span":{"begin":18,"end":22},"obj":"IN"},{"id":"T1067","span":{"begin":23,"end":27},"obj":"NN"},{"id":"T1068","span":{"begin":28,"end":30},"obj":"IN"},{"id":"T1069","span":{"begin":31,"end":38},"obj":"NNP"},{"id":"T1070","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T1071","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T1072","span":{"begin":50,"end":54},"obj":"NNP"},{"id":"T1073","span":{"begin":55,"end":61},"obj":"VBD"},{"id":"T1074","span":{"begin":62,"end":71},"obj":"JJ"},{"id":"T1075","span":{"begin":72,"end":82},"obj":"NN"},{"id":"T1076","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T1077","span":{"begin":86,"end":102},"obj":"JJ"},{"id":"T1078","span":{"begin":103,"end":112},"obj":"NNS"},{"id":"T1079","span":{"begin":113,"end":116},"obj":"CC"},{"id":"T1080","span":{"begin":117,"end":125},"obj":"VBN"},{"id":"T1081","span":{"begin":126,"end":131},"obj":"JJ"},{"id":"T1082","span":{"begin":132,"end":142},"obj":"NN"},{"id":"T1083","span":{"begin":143,"end":147},"obj":"IN"},{"id":"T1084","span":{"begin":148,"end":154},"obj":"NN"},{"id":"T1085","span":{"begin":155,"end":166},"obj":"NN"},{"id":"T1086","span":{"begin":166,"end":167},"obj":"."},{"id":"T1087","span":{"begin":168,"end":171},"obj":"DT"},{"id":"T1088","span":{"begin":172,"end":179},"obj":"NN"}],"relations":[{"id":"R827","pred":"ROOT","subj":"T1065","obj":"T1065"},{"id":"R828","pred":"mark","subj":"T1066","obj":"T1073"},{"id":"R829","pred":"nsubj","subj":"T1067","obj":"T1073"},{"id":"R830","pred":"prep","subj":"T1068","obj":"T1067"},{"id":"R831","pred":"compound","subj":"T1069","obj":"T1070"},{"id":"R832","pred":"pobj","subj":"T1070","obj":"T1068"},{"id":"R833","pred":"prep","subj":"T1071","obj":"T1067"},{"id":"R834","pred":"pobj","subj":"T1072","obj":"T1071"},{"id":"R835","pred":"ccomp","subj":"T1073","obj":"T1065"},{"id":"R836","pred":"amod","subj":"T1074","obj":"T1075"},{"id":"R837","pred":"dobj","subj":"T1075","obj":"T1073"},{"id":"R838","pred":"prep","subj":"T1076","obj":"T1075"},{"id":"R839","pred":"amod","subj":"T1077","obj":"T1078"},{"id":"R840","pred":"pobj","subj":"T1078","obj":"T1076"},{"id":"R841","pred":"cc","subj":"T1079","obj":"T1075"},{"id":"R842","pred":"amod","subj":"T1080","obj":"T1082"},{"id":"R843","pred":"amod","subj":"T1081","obj":"T1082"},{"id":"R844","pred":"conj","subj":"T1082","obj":"T1075"},{"id":"R845","pred":"prep","subj":"T1083","obj":"T1082"},{"id":"R846","pred":"amod","subj":"T1084","obj":"T1085"},{"id":"R847","pred":"pobj","subj":"T1085","obj":"T1083"},{"id":"R848","pred":"punct","subj":"T1086","obj":"T1065"},{"id":"R849","pred":"det","subj":"T1087","obj":"T1088"}],"attributes":[{"subj":"T1064","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1065","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1066","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1067","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1068","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1069","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1070","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1071","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1072","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1073","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1074","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1075","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1076","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1077","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1078","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1079","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1080","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1081","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1082","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1083","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1084","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1085","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1086","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1087","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T1088","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T2031","span":{"begin":126,"end":142},"obj":"http://purl.obolibrary.org/obo/GO_0051092"}],"attributes":[{"subj":"T2031","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T2040","span":{"begin":148,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T2040","pred":"source","obj":"GO-MF"}]},{"project":"events-check-again","denotations":[{"id":"T2130","span":{"begin":23,"end":27},"obj":"Negative_regulation"},{"id":"T2131","span":{"begin":31,"end":38},"obj":"Protein"}],"relations":[{"id":"R1775","pred":"themeOf","subj":"T2131","obj":"T2130"}],"attributes":[{"subj":"T2130","pred":"source","obj":"events-check-again"},{"subj":"T2131","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2155","span":{"begin":31,"end":46},"obj":"Protein"},{"id":"T2156","span":{"begin":126,"end":131},"obj":"Protein"},{"id":"T2157","span":{"begin":23,"end":27},"obj":"Negative_regulation"},{"id":"T2158","span":{"begin":132,"end":142},"obj":"Positive_regulation"},{"id":"T2159","span":{"begin":117,"end":125},"obj":"Negative_regulation"}],"relations":[{"id":"R1782","pred":"themeOf","subj":"T2155","obj":"T2157"},{"id":"R1783","pred":"themeOf","subj":"T2156","obj":"T2158"},{"id":"R1784","pred":"causeOf","subj":"T2157","obj":"T2159"},{"id":"R1785","pred":"themeOf","subj":"T2158","obj":"T2159"}],"attributes":[{"subj":"T2155","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T2156","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T2157","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T2158","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T2159","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T973","span":{"begin":23,"end":27},"obj":"Negative_regulation"},{"id":"T974","span":{"begin":31,"end":38},"obj":"Protein"}],"relations":[{"id":"R755","pred":"themeOf","subj":"T974","obj":"T973"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T973","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T974","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1972","span":{"begin":31,"end":38},"obj":"Q9H0F6"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T1972","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T941","span":{"begin":23,"end":27},"obj":"Negative_regulation"},{"id":"T942","span":{"begin":31,"end":38},"obj":"Protein"}],"relations":[{"id":"R738","pred":"themeOf","subj":"T942","obj":"T941"}],"attributes":[{"subj":"T941","pred":"source","obj":"test2"},{"subj":"T942","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#93c0ec","default":true},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#dbec93"},{"id":"GO-BP","color":"#e393ec"},{"id":"GO-MF","color":"#93ecc9"},{"id":"events-check-again","color":"#ecaf93"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#9593ec"},{"id":"bionlp-st-ge-2016-reference","color":"#aaec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93c4"},{"id":"test2","color":"#93deec"}]}]}}