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PMC:3279418 / 3493-3667 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22348129-21455173-89575668 167-168 21455173 denotes 7
22348129-21455180-89575669 171-172 21455180 denotes 9
T89522 167-168 21455173 denotes 7
T20207 171-172 21455180 denotes 9

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1762 0-17 JJ denotes SHARPIN-deficient
T1763 18-23 NN denotes mouse
T1764 24-33 JJ denotes embryonic
T1765 34-44 NN denotes fibroblast
T1766 45-46 -LRB- denotes (
T1767 46-49 NN denotes MEF
T1768 49-50 -RRB- denotes )
T1769 51-55 VB denotes were
T1770 56-66 VB denotes sensitized
T1771 67-69 TO denotes to
T1772 70-82 JJ denotes TNFα-induced
T1773 83-92 NN denotes apoptosis
T1774 93-96 CC denotes and
T1775 97-101 NN denotes cell
T1776 102-107 NN denotes death
T1777 108-111 VB denotes was
T1778 112-122 VB denotes implicated
T1779 123-125 IN denotes as
T1780 126-127 DT denotes a
T1781 128-134 NN denotes factor
T1782 135-137 IN denotes in
T1783 138-141 DT denotes the
T1784 142-152 NN denotes dermatitis
T1785 153-155 IN denotes of
T1786 156-160 NN denotes cpdm
T1787 161-165 NN denotes mice
T1788 166-167 -LRB- denotes [
T1789 167-168 CD denotes 7
T1790 168-169 -RRB- denotes ]
T1791 169-170 NN denotes –
T1792 170-171 -LRB- denotes [
T1793 171-172 CD denotes 9
T1794 172-173 -RRB- denotes ]
R1524 T1765 T1762 arg1Of fibroblast,SHARPIN-deficient
R1525 T1765 T1763 arg1Of fibroblast,mouse
R1526 T1765 T1764 arg1Of fibroblast,embryonic
R1527 T1765 T1766 arg1Of fibroblast,(
R1528 T1765 T1769 arg1Of fibroblast,were
R1529 T1765 T1770 arg2Of fibroblast,sensitized
R1530 T1767 T1766 arg2Of MEF,(
R1531 T1768 T1766 arg3Of ),(
R1532 T1770 T1769 arg2Of sensitized,were
R1533 T1770 T1771 arg1Of sensitized,to
R1534 T1770 T1774 arg1Of sensitized,and
R1535 T1773 T1771 arg2Of apoptosis,to
R1536 T1773 T1772 arg1Of apoptosis,TNFα-induced
R1537 T1776 T1775 arg1Of death,cell
R1538 T1776 T1777 arg1Of death,was
R1539 T1776 T1778 arg2Of death,implicated
R1540 T1778 T1774 arg2Of implicated,and
R1541 T1778 T1777 arg2Of implicated,was
R1542 T1778 T1779 arg1Of implicated,as
R1543 T1778 T1792 arg1Of implicated,[
R1544 T1781 T1779 arg2Of factor,as
R1545 T1781 T1780 arg1Of factor,a
R1546 T1781 T1782 arg1Of factor,in
R1547 T1784 T1783 arg1Of dermatitis,the
R1548 T1784 T1785 arg1Of dermatitis,of
R1549 T1784 T1788 arg1Of dermatitis,[
R1550 T1787 T1785 arg2Of mice,of
R1551 T1787 T1786 arg1Of mice,cpdm
R1552 T1789 T1788 arg2Of 7,[
R1553 T1790 T1788 arg3Of ],[
R1554 T1791 T1782 arg2Of –,in
R1555 T1791 T1784 arg1Of –,dermatitis
R1556 T1793 T1792 arg2Of 9,[
R1557 T1794 T1792 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1402 0-17 JJ denotes SHARPIN-deficient
T1403 18-23 NN denotes mouse
T1404 24-33 JJ denotes embryonic
T1405 34-44 NN denotes fibroblast
T1406 45-46 -LRB- denotes (
T1407 46-49 NNP denotes MEF
T1408 49-50 -RRB- denotes )
T1409 51-55 VBD denotes were
T1410 56-66 VBN denotes sensitized
T1411 67-69 TO denotes to
T1412 70-82 JJ denotes TNFα-induced
T1413 83-92 NN denotes apoptosis
T1414 93-96 CC denotes and
T1415 97-101 NN denotes cell
T1416 102-107 NN denotes death
T1417 108-111 VBD denotes was
T1418 112-122 VBN denotes implicated
T1419 123-125 IN denotes as
T1420 126-127 DT denotes a
T1421 128-134 NN denotes factor
T1422 135-137 IN denotes in
T1423 138-141 DT denotes the
T1424 142-152 NN denotes dermatitis
T1425 153-155 IN denotes of
T1426 156-160 NN denotes cpdm
T1427 161-165 NNS denotes mice
T1428 166-167 VBP denotes [
T1429 167-168 CD denotes 7
T1430 168-169 NNP denotes ]
T1431 170-171 NN denotes [
T1432 171-172 CD denotes 9
T1433 172-173 NNP denotes ]
T1434 173-174 . denotes .
R1164 T1402 T1410 amod SHARPIN-deficient,sensitized
R1165 T1403 T1410 nsubjpass mouse,sensitized
R1166 T1404 T1405 amod embryonic,fibroblast
R1167 T1405 T1403 appos fibroblast,mouse
R1168 T1406 T1407 punct (,MEF
R1169 T1407 T1405 appos MEF,fibroblast
R1170 T1408 T1403 punct ),mouse
R1171 T1409 T1410 auxpass were,sensitized
R1172 T1410 T1410 ROOT sensitized,sensitized
R1173 T1411 T1410 prep to,sensitized
R1174 T1412 T1413 advmod TNFα-induced,apoptosis
R1175 T1413 T1411 pobj apoptosis,to
R1176 T1414 T1413 cc and,apoptosis
R1177 T1415 T1416 compound cell,death
R1178 T1416 T1418 nsubjpass death,implicated
R1179 T1417 T1418 auxpass was,implicated
R1180 T1418 T1410 conj implicated,sensitized
R1181 T1419 T1418 prep as,implicated
R1182 T1420 T1421 det a,factor
R1183 T1421 T1419 pobj factor,as
R1184 T1422 T1421 prep in,factor
R1185 T1423 T1424 det the,dermatitis
R1186 T1424 T1422 pobj dermatitis,in
R1187 T1425 T1424 prep of,dermatitis
R1188 T1426 T1427 compound cpdm,mice
R1189 T1427 T1425 pobj mice,of
R1190 T1428 T1430 nmod [,]
R1191 T1429 T1430 nummod 7,]
R1192 T1430 T1431 nmod ],[
R1193 T1431 T1433 nmod [,]
R1194 T1432 T1433 nummod 9,]
R1195 T1433 T1418 conj ],implicated
R1196 T1434 T1418 punct .,implicated

GO-BP

Id Subject Object Predicate Lexical cue
T2010 56-66 http://purl.obolibrary.org/obo/GO_0046960 denotes sensitized
T2011 83-92 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T2012 83-92 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T2013 97-107 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T2014 102-107 http://purl.obolibrary.org/obo/GO_0016265 denotes death

GO-CC

Id Subject Object Predicate Lexical cue
T2047 97-101 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T987 0-174 Sentence denotes SHARPIN-deficient mouse embryonic fibroblast (MEF) were sensitized to TNFα-induced apoptosis and cell death was implicated as a factor in the dermatitis of cpdm mice [7]–[9].
T23 0-174 Sentence denotes SHARPIN-deficient mouse embryonic fibroblast (MEF) were sensitized to TNFα-induced apoptosis and cell death was implicated as a factor in the dermatitis of cpdm mice [7]–[9].

ICD10

Id Subject Object Predicate Lexical cue
T2037 142-152 http://purl.bioontology.org/ontology/ICD10/L30.9 denotes dermatitis

events-check-again

Id Subject Object Predicate Lexical cue
T2125 0-7 Protein denotes SHARPIN
T2126 8-17 Negative_regulation denotes deficient
T2127 70-74 Protein denotes TNFα
R1772 T2125 T2126 themeOf SHARPIN,deficient

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2149 0-7 Protein denotes SHARPIN
T2150 70-74 Protein denotes TNFα
T2151 8-17 Negative_regulation denotes deficient
R1780 T2149 T2151 themeOf SHARPIN,deficient

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T968 0-7 Protein denotes SHARPIN
T969 8-17 Negative_regulation denotes deficient
T970 70-74 Protein denotes TNFα
R753 T968 T969 themeOf SHARPIN,deficient

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1969 0-7 Q9H0F6 denotes SHARPIN

test2

Id Subject Object Predicate Lexical cue
T936 0-7 Protein denotes SHARPIN
T937 8-17 Negative_regulation denotes deficient
T938 70-74 Protein denotes TNFα
R736 T936 T937 themeOf SHARPIN,deficient