PMC:3279418 / 32695-32901
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12536 | 0-11 | NN | denotes | Immunoblots |
| T12537 | 12-16 | VB | denotes | were |
| T12538 | 17-26 | VB | denotes | performed |
| T12539 | 27-31 | IN | denotes | with |
| T12540 | 32-42 | NN | denotes | antibodies |
| T12541 | 43-44 | -LRB- | denotes | ( |
| T12542 | 44-48 | NNP | denotes | Cell |
| T12543 | 49-58 | NNP | denotes | Signaling |
| T12544 | 59-69 | NNP | denotes | Technology |
| T12545 | 69-70 | -RRB- | denotes | ) |
| T12546 | 71-78 | IN | denotes | against |
| T12547 | 79-87 | NN | denotes | p-IKK1/2 |
| T12548 | 87-88 | -LRB- | denotes | ( |
| T12549 | 88-89 | -SHARP- | denotes | # |
| T12550 | 89-93 | CD | denotes | 2697 |
| T12551 | 93-94 | -RRB- | denotes | ) |
| T12552 | 94-95 | -COMMA- | denotes | , |
| T12553 | 96-102 | NN | denotes | p-IκBα |
| T12554 | 103-104 | -LRB- | denotes | ( |
| T12555 | 104-105 | -SHARP- | denotes | # |
| T12556 | 105-109 | CD | denotes | 9246 |
| T12557 | 109-110 | -RRB- | denotes | ) |
| T12558 | 110-111 | -COMMA- | denotes | , |
| T12559 | 112-116 | NN | denotes | IκBα |
| T12560 | 117-118 | -LRB- | denotes | ( |
| T12561 | 118-119 | -SHARP- | denotes | # |
| T12562 | 119-123 | CD | denotes | 4814 |
| T12563 | 123-124 | -RRB- | denotes | ) |
| T12564 | 124-125 | -COMMA- | denotes | , |
| T12565 | 126-132 | NN | denotes | p-TBK1 |
| T12566 | 132-133 | -LRB- | denotes | ( |
| T12567 | 133-134 | -SHARP- | denotes | # |
| T12568 | 134-138 | CD | denotes | 5483 |
| T12569 | 138-139 | -RRB- | denotes | ) |
| T12570 | 139-140 | -COMMA- | denotes | , |
| T12571 | 141-146 | NN | denotes | p-p38 |
| T12572 | 147-148 | -LRB- | denotes | ( |
| T12573 | 148-149 | -SHARP- | denotes | # |
| T12574 | 149-153 | CD | denotes | 9216 |
| T12575 | 153-154 | -RRB- | denotes | ) |
| T12576 | 154-155 | -COMMA- | denotes | , |
| T12577 | 156-159 | NN | denotes | p38 |
| T12578 | 160-161 | -LRB- | denotes | ( |
| T12579 | 161-162 | -SHARP- | denotes | # |
| T12580 | 162-166 | CD | denotes | 9212 |
| T12581 | 166-167 | -RRB- | denotes | ) |
| T12582 | 167-168 | -COMMA- | denotes | , |
| T12583 | 169-177 | NN | denotes | p-ERK1/2 |
| T12584 | 178-179 | -LRB- | denotes | ( |
| T12585 | 179-180 | -SHARP- | denotes | # |
| T12586 | 180-184 | CD | denotes | 4376 |
| T12587 | 184-185 | -RRB- | denotes | ) |
| T12588 | 185-186 | -COMMA- | denotes | , |
| T12589 | 187-190 | CC | denotes | and |
| T12590 | 191-197 | NN | denotes | ERK1/2 |
| T12591 | 198-199 | -LRB- | denotes | ( |
| T12592 | 199-200 | -SHARP- | denotes | # |
| T12593 | 200-204 | CD | denotes | 4695 |
| T12594 | 204-205 | -RRB- | denotes | ) |
| R10426 | T12536 | T12537 | arg1Of | Immunoblots,were |
| R10427 | T12536 | T12538 | arg2Of | Immunoblots,performed |
| R10428 | T12538 | T12537 | arg2Of | performed,were |
| R10429 | T12538 | T12539 | arg1Of | performed,with |
| R10430 | T12540 | T12539 | arg2Of | antibodies,with |
| R10431 | T12540 | T12541 | arg1Of | antibodies,( |
| R10432 | T12540 | T12546 | arg1Of | antibodies,against |
| R10433 | T12544 | T12541 | arg2Of | Technology,( |
| R10434 | T12544 | T12542 | arg1Of | Technology,Cell |
| R10435 | T12544 | T12543 | arg1Of | Technology,Signaling |
| R10436 | T12545 | T12541 | arg3Of | ),( |
| R10437 | T12547 | T12548 | arg1Of | p-IKK1/2,( |
| R10438 | T12547 | T12552 | arg1Of | p-IKK1/2,"," |
| R10439 | T12550 | T12548 | arg2Of | 2697,( |
| R10440 | T12550 | T12549 | arg1Of | 2697,# |
| R10441 | T12551 | T12548 | arg3Of | ),( |
| R10442 | T12552 | T12558 | arg1Of | ",","," |
| R10443 | T12553 | T12552 | arg2Of | p-IκBα,"," |
| R10444 | T12553 | T12554 | arg1Of | p-IκBα,( |
| R10445 | T12556 | T12554 | arg2Of | 9246,( |
| R10446 | T12556 | T12555 | arg1Of | 9246,# |
| R10447 | T12557 | T12554 | arg3Of | ),( |
| R10448 | T12558 | T12546 | arg2Of | ",",against |
| R10449 | T12559 | T12560 | arg1Of | IκBα,( |
| R10450 | T12559 | T12564 | arg1Of | IκBα,"," |
| R10451 | T12562 | T12560 | arg2Of | 4814,( |
| R10452 | T12562 | T12561 | arg1Of | 4814,# |
| R10453 | T12563 | T12560 | arg3Of | ),( |
| R10454 | T12564 | T12570 | arg1Of | ",","," |
| R10455 | T12565 | T12564 | arg2Of | p-TBK1,"," |
| R10456 | T12565 | T12566 | arg1Of | p-TBK1,( |
| R10457 | T12568 | T12566 | arg2Of | 5483,( |
| R10458 | T12568 | T12567 | arg1Of | 5483,# |
| R10459 | T12569 | T12566 | arg3Of | ),( |
| R10460 | T12570 | T12576 | arg1Of | ",","," |
| R10461 | T12571 | T12570 | arg2Of | p-p38,"," |
| R10462 | T12571 | T12572 | arg1Of | p-p38,( |
| R10463 | T12574 | T12572 | arg2Of | 9216,( |
| R10464 | T12574 | T12573 | arg1Of | 9216,# |
| R10465 | T12575 | T12572 | arg3Of | ),( |
| R10466 | T12576 | T12558 | arg2Of | ",","," |
| R10467 | T12577 | T12578 | arg1Of | p38,( |
| R10468 | T12577 | T12582 | arg1Of | p38,"," |
| R10469 | T12580 | T12578 | arg2Of | 9212,( |
| R10470 | T12580 | T12579 | arg1Of | 9212,# |
| R10471 | T12581 | T12578 | arg3Of | ),( |
| R10472 | T12582 | T12589 | arg1Of | ",",and |
| R10473 | T12583 | T12582 | arg2Of | p-ERK1/2,"," |
| R10474 | T12583 | T12584 | arg1Of | p-ERK1/2,( |
| R10475 | T12586 | T12584 | arg2Of | 4376,( |
| R10476 | T12586 | T12585 | arg1Of | 4376,# |
| R10477 | T12587 | T12584 | arg3Of | ),( |
| R10478 | T12589 | T12576 | arg2Of | and,"," |
| R10479 | T12589 | T12588 | arg1Of | and,"," |
| R10480 | T12590 | T12589 | arg2Of | ERK1/2,and |
| R10481 | T12590 | T12591 | arg1Of | ERK1/2,( |
| R10482 | T12593 | T12591 | arg2Of | 4695,( |
| R10483 | T12593 | T12592 | arg1Of | 4695,# |
| R10484 | T12594 | T12591 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12425 | 0-11 | NNS | denotes | Immunoblots |
| T12426 | 12-16 | VBD | denotes | were |
| T12427 | 17-26 | VBN | denotes | performed |
| T12428 | 27-31 | IN | denotes | with |
| T12429 | 32-42 | NNS | denotes | antibodies |
| T12430 | 43-44 | -LRB- | denotes | ( |
| T12431 | 44-48 | NNP | denotes | Cell |
| T12432 | 49-58 | NNP | denotes | Signaling |
| T12433 | 59-69 | NNP | denotes | Technology |
| T12434 | 69-70 | -RRB- | denotes | ) |
| T12435 | 71-78 | IN | denotes | against |
| T12436 | 79-85 | NN | denotes | p-IKK1 |
| T12437 | 85-86 | NN | denotes | / |
| T12438 | 86-87 | CD | denotes | 2 |
| T12439 | 87-88 | -LRB- | denotes | ( |
| T12440 | 88-89 | # | denotes | # |
| T12441 | 89-93 | CD | denotes | 2697 |
| T12442 | 93-94 | -RRB- | denotes | ) |
| T12443 | 94-95 | , | denotes | , |
| T12444 | 96-102 | NNP | denotes | p-IκBα |
| T12445 | 103-104 | -LRB- | denotes | ( |
| T12446 | 104-105 | # | denotes | # |
| T12447 | 105-109 | CD | denotes | 9246 |
| T12448 | 109-110 | -RRB- | denotes | ) |
| T12449 | 110-111 | , | denotes | , |
| T12450 | 112-116 | NNP | denotes | IκBα |
| T12451 | 117-118 | -LRB- | denotes | ( |
| T12452 | 118-119 | # | denotes | # |
| T12453 | 119-123 | CD | denotes | 4814 |
| T12454 | 123-124 | -RRB- | denotes | ) |
| T12455 | 124-125 | , | denotes | , |
| T12456 | 126-132 | NN | denotes | p-TBK1 |
| T12457 | 132-133 | -LRB- | denotes | ( |
| T12458 | 133-134 | # | denotes | # |
| T12459 | 134-138 | CD | denotes | 5483 |
| T12460 | 138-139 | -RRB- | denotes | ) |
| T12461 | 139-140 | , | denotes | , |
| T12462 | 141-146 | JJ | denotes | p-p38 |
| T12463 | 147-148 | -LRB- | denotes | ( |
| T12464 | 148-149 | # | denotes | # |
| T12465 | 149-153 | CD | denotes | 9216 |
| T12466 | 153-154 | -RRB- | denotes | ) |
| T12467 | 154-155 | , | denotes | , |
| T12468 | 156-159 | CD | denotes | p38 |
| T12469 | 160-161 | -LRB- | denotes | ( |
| T12470 | 161-162 | # | denotes | # |
| T12471 | 162-166 | CD | denotes | 9212 |
| T12472 | 166-167 | -RRB- | denotes | ) |
| T12473 | 167-168 | , | denotes | , |
| T12474 | 169-175 | JJ | denotes | p-ERK1 |
| T12475 | 175-176 | NN | denotes | / |
| T12476 | 176-177 | CD | denotes | 2 |
| T12477 | 178-179 | -LRB- | denotes | ( |
| T12478 | 179-180 | # | denotes | # |
| T12479 | 180-184 | CD | denotes | 4376 |
| T12480 | 184-185 | -RRB- | denotes | ) |
| T12481 | 185-186 | , | denotes | , |
| T12482 | 187-190 | CC | denotes | and |
| T12483 | 191-197 | NNP | denotes | ERK1/2 |
| T12484 | 198-199 | -LRB- | denotes | ( |
| T12485 | 199-200 | # | denotes | # |
| T12486 | 200-204 | CD | denotes | 4695 |
| T12487 | 204-205 | -RRB- | denotes | ) |
| T12488 | 205-206 | . | denotes | . |
| R10312 | T12425 | T12427 | nsubjpass | Immunoblots,performed |
| R10313 | T12426 | T12427 | auxpass | were,performed |
| R10314 | T12427 | T12427 | ROOT | performed,performed |
| R10315 | T12428 | T12427 | prep | with,performed |
| R10316 | T12429 | T12428 | pobj | antibodies,with |
| R10317 | T12430 | T12433 | punct | (,Technology |
| R10318 | T12431 | T12433 | compound | Cell,Technology |
| R10319 | T12432 | T12433 | compound | Signaling,Technology |
| R10320 | T12433 | T12429 | appos | Technology,antibodies |
| R10321 | T12434 | T12429 | punct | ),antibodies |
| R10322 | T12435 | T12427 | prep | against,performed |
| R10323 | T12436 | T12435 | pobj | p-IKK1,against |
| R10324 | T12437 | T12427 | advcl | /,performed |
| R10325 | T12438 | T12437 | nummod | 2,/ |
| R10326 | T12439 | T12440 | punct | (,# |
| R10327 | T12440 | T12441 | nmod | #,2697 |
| R10328 | T12441 | T12437 | appos | 2697,/ |
| R10329 | T12442 | T12437 | punct | ),/ |
| R10330 | T12443 | T12437 | punct | ",",/ |
| R10331 | T12444 | T12444 | ROOT | p-IκBα,p-IκBα |
| R10332 | T12445 | T12446 | punct | (,# |
| R10333 | T12446 | T12446 | ROOT | #,# |
| R10334 | T12447 | T12446 | npadvmod | 9246,# |
| R10335 | T12448 | T12446 | punct | ),# |
| R10336 | T12449 | T12446 | punct | ",",# |
| R10337 | T12450 | T12446 | conj | IκBα,# |
| R10338 | T12451 | T12452 | punct | (,# |
| R10339 | T12452 | T12453 | nmod | #,4814 |
| R10340 | T12453 | T12450 | parataxis | 4814,IκBα |
| R10341 | T12454 | T12453 | punct | ),4814 |
| R10342 | T12455 | T12450 | punct | ",",IκBα |
| R10343 | T12456 | T12450 | conj | p-TBK1,IκBα |
| R10344 | T12457 | T12456 | punct | (,p-TBK1 |
| R10345 | T12458 | T12459 | nmod | #,5483 |
| R10346 | T12459 | T12456 | appos | 5483,p-TBK1 |
| R10347 | T12460 | T12456 | punct | ),p-TBK1 |
| R10348 | T12461 | T12456 | punct | ",",p-TBK1 |
| R10349 | T12462 | T12456 | conj | p-p38,p-TBK1 |
| R10350 | T12463 | T12464 | punct | (,# |
| R10351 | T12464 | T12462 | parataxis | #,p-p38 |
| R10352 | T12465 | T12464 | dep | 9216,# |
| R10353 | T12466 | T12464 | punct | ),# |
| R10354 | T12467 | T12462 | punct | ",",p-p38 |
| R10355 | T12468 | T12462 | appos | p38,p-p38 |
| R10356 | T12469 | T12471 | punct | (,9212 |
| R10357 | T12470 | T12471 | nmod | #,9212 |
| R10358 | T12471 | T12468 | parataxis | 9212,p38 |
| R10360 | T12473 | T12462 | punct | ",",p-p38 |
| R10361 | T12474 | T12475 | compound | p-ERK1,/ |
| R10362 | T12475 | T12456 | appos | /,p-TBK1 |
| R10363 | T12476 | T12475 | nummod | 2,/ |
| R10364 | T12477 | T12478 | punct | (,# |
| R10365 | T12478 | T12475 | appos | #,/ |
| R10366 | T12479 | T12478 | nummod | 4376,# |
| R10367 | T12480 | T12478 | punct | ),# |
| R10368 | T12481 | T12475 | punct | ",",/ |
| R10369 | T12482 | T12475 | cc | and,/ |
| R10370 | T12483 | T12475 | conj | ERK1/2,/ |
| R10371 | T12484 | T12485 | punct | (,# |
| R10372 | T12485 | T12483 | parataxis | #,ERK1/2 |
| R10373 | T12486 | T12485 | npadvmod | 4695,# |
| R10374 | T12487 | T12485 | punct | ),# |
| R10375 | T12488 | T12446 | punct | .,# |
| R10359 | T12472 | T12462 | punct | ),p-p38 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12628 | 128-132 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | TBK1 |
| T12629 | 143-146 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | p38 |
| T12630 | 156-159 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | p38 |
| T12631 | 171-175 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
| T12632 | 191-195 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12634 | 32-42 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
| T12635 | 128-132 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | TBK1 |
| T12636 | 143-146 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | p38 |
| T12637 | 156-159 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | p38 |
| T12638 | 171-175 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
| T12639 | 191-195 | http://purl.obolibrary.org/obo/GO_0004707 | denotes | ERK1 |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12640 | 32-42 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T12641 | 32-42 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12384 | 0-206 | Sentence | denotes | Immunoblots were performed with antibodies (Cell Signaling Technology) against p-IKK1/2(#2697), p-IκBα (#9246), IκBα (#4814), p-TBK1(#5483), p-p38 (#9216), p38 (#9212), p-ERK1/2 (#4376), and ERK1/2 (#4695). |
| T234 | 0-206 | Sentence | denotes | Immunoblots were performed with antibodies (Cell Signaling Technology) against p-IKK1/2(#2697), p-IκBα (#9246), IκBα (#4814), p-TBK1(#5483), p-p38 (#9216), p38 (#9212), p-ERK1/2 (#4376), and ERK1/2 (#4695). |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12662 | 81-85 | Protein | denotes | IKK1 |
| T12663 | 86-87 | Protein | denotes | 2 |
| T12664 | 98-102 | Protein | denotes | IκBα |
| T12665 | 112-116 | Protein | denotes | IκBα |
| T12666 | 128-132 | Protein | denotes | TBK1 |
| T12667 | 171-175 | Protein | denotes | ERK1 |
| T12668 | 176-177 | Protein | denotes | 2 |
| T12669 | 191-195 | Protein | denotes | ERK1 |
| T12670 | 196-197 | Protein | denotes | 2 |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12672 | 96-102 | Protein | denotes | p-IκBα |
| T12673 | 112-116 | Protein | denotes | IκBα |
| T12674 | 128-132 | Protein | denotes | TBK1 |
| T12675 | 143-146 | Protein | denotes | p38 |
| T12676 | 156-159 | Protein | denotes | p38 |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12372 | 81-85 | Protein | denotes | IKK1 |
| T12373 | 86-87 | Protein | denotes | 2 |
| T12374 | 98-102 | Protein | denotes | IκBα |
| T12375 | 112-116 | Protein | denotes | IκBα |
| T12376 | 128-132 | Protein | denotes | TBK1 |
| T12377 | 171-175 | Protein | denotes | ERK1 |
| T12378 | 176-177 | Protein | denotes | 2 |
| T12379 | 191-195 | Protein | denotes | ERK1 |
| T12380 | 196-197 | Protein | denotes | 2 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12608 | 81-85 | O15111 | denotes | IKK1 |
| T12609 | 81-85 | Q60680-2 | denotes | IKK1 |
| T12610 | 98-102 | P25963 | denotes | IκBα |
| T12611 | 112-116 | P25963 | denotes | IκBα |
| T12612 | 128-132 | Q9UHD2 | denotes | TBK1 |
| T12613 | 143-146 | P53778 | denotes | p38 |
| T12614 | 143-146 | Q15759 | denotes | p38 |
| T12615 | 143-146 | Q16539 | denotes | p38 |
| T12616 | 143-146 | O15264 | denotes | p38 |
| T12617 | 156-159 | Q15759 | denotes | p38 |
| T12618 | 156-159 | O15264 | denotes | p38 |
| T12619 | 156-159 | P53778 | denotes | p38 |
| T12620 | 156-159 | Q16539 | denotes | p38 |
| T12621 | 171-175 | P27361 | denotes | ERK1 |
| T12622 | 191-195 | P27361 | denotes | ERK1 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12362 | 81-85 | Protein | denotes | IKK1 |
| T12363 | 86-87 | Protein | denotes | 2 |
| T12364 | 98-102 | Protein | denotes | IκBα |
| T12365 | 112-116 | Protein | denotes | IκBα |
| T12366 | 128-132 | Protein | denotes | TBK1 |
| T12367 | 171-175 | Protein | denotes | ERK1 |
| T12368 | 176-177 | Protein | denotes | 2 |
| T12369 | 191-195 | Protein | denotes | ERK1 |
| T12370 | 196-197 | Protein | denotes | 2 |