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PMC:3279418 / 29511-30212 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11111 0-6 NN denotes BMDC-T
T11112 7-11 NN denotes cell
T11113 12-14 FW denotes in
T11114 15-20 FW denotes vitro
T11115 21-32 NN denotes interaction
T11116 33-35 NN denotes WT
T11117 36-39 CC denotes and
T11118 40-44 NN denotes cpdm
T11119 45-49 NN denotes BMDC
T11120 50-51 -LRB- denotes (
T11121 51-56 CD denotes 5×104
T11122 56-57 -RRB- denotes )
T11123 58-62 VB denotes were
T11124 63-73 VB denotes stimulated
T11125 74-78 IN denotes with
T11126 79-85 NN denotes medium
T11127 85-86 -COMMA- denotes ,
T11128 87-88 CD denotes 1
T11129 89-94 NN denotes µg/mL
T11130 95-98 NN denotes LPS
T11131 98-99 -COMMA- denotes ,
T11132 100-102 CD denotes 25
T11133 103-108 NN denotes µg/mL
T11134 109-112 CC denotes and
T11135 113-114 CD denotes 5
T11136 115-120 NN denotes µg/mL
T11137 121-128 NN denotes Pam3CYS
T11138 130-132 CD denotes 24
T11139 133-138 NN denotes hours
T11140 139-144 RB denotes later
T11141 144-145 -COMMA- denotes ,
T11142 146-151 NN denotes cells
T11143 152-156 VB denotes were
T11144 157-166 VB denotes collected
T11145 167-170 CC denotes and
T11146 171-177 VB denotes washed
T11147 178-182 IN denotes with
T11148 183-186 NNP denotes PBS
T11149 188-198 JJ denotes Allogeneic
T11150 199-204 NN denotes naïve
T11151 205-209 JJ denotes CD4+
T11152 210-211 NN denotes T
T11153 212-217 NN denotes cells
T11154 218-222 VB denotes were
T11155 223-231 VB denotes isolated
T11156 232-236 IN denotes from
T11157 237-244 NN denotes spleens
T11158 245-247 IN denotes of
T11159 248-254 NN denotes BALB/c
T11160 255-259 NN denotes mice
T11161 260-262 IN denotes by
T11162 263-271 JJ denotes negative
T11163 272-281 NN denotes selection
T11164 282-285 NN denotes kit
T11165 286-287 -LRB- denotes (
T11166 287-297 NN denotes Invitrogen
T11167 297-298 -RRB- denotes )
T11168 299-302 CC denotes and
T11169 303-307 VB denotes were
T11170 308-312 RB denotes then
T11171 313-318 VB denotes added
T11172 319-321 IN denotes at
T11173 322-329 CD denotes 2.5×105
T11174 330-333 CC denotes and
T11175 334-345 VB denotes co-cultured
T11176 346-350 IN denotes with
T11177 351-360 VB denotes activated
T11178 361-365 NN denotes BMDC
T11179 367-372 IN denotes After
T11180 373-374 CD denotes 5
T11181 375-379 NN denotes days
T11182 379-380 -COMMA- denotes ,
T11183 381-392 NN denotes supernatant
T11184 393-396 VB denotes was
T11185 397-406 VB denotes collected
T11186 407-410 CC denotes and
T11187 411-414 DT denotes the
T11188 415-424 NN denotes secretion
T11189 425-427 IN denotes of
T11190 428-432 NN denotes IFNγ
T11191 432-433 -COMMA- denotes ,
T11192 434-437 NN denotes IL4
T11193 437-438 -COMMA- denotes ,
T11194 439-442 NN denotes IL2
T11195 442-443 -COMMA- denotes ,
T11196 444-447 CC denotes and
T11197 448-453 NN denotes IL17A
T11198 454-462 VB denotes measured
T11199 463-465 IN denotes by
T11200 466-471 NN denotes ELISA
T11201 473-481 JJ denotes Negative
T11202 482-490 NN denotes controls
T11203 491-494 VB denotes are
T11204 495-496 CD denotes 1
T11205 496-497 -RRB- denotes )
T11206 498-508 VB denotes stimulated
T11207 509-513 NN denotes BMDC
T11208 514-521 IN denotes without
T11209 522-532 NN denotes co-culture
T11210 533-537 IN denotes with
T11211 538-548 JJ denotes allogeneic
T11212 549-553 JJ denotes CD4+
T11213 554-555 NN denotes T
T11214 556-561 NN denotes cells
T11215 561-562 -COLON- denotes ;
T11216 563-564 LS denotes 2
T11217 564-565 -RRB- denotes )
T11218 566-576 JJ denotes allogeneic
T11219 577-581 JJ denotes CD4+
T11220 582-583 NN denotes T
T11221 584-589 NN denotes cells
T11222 590-597 IN denotes without
T11223 598-608 NN denotes co-culture
T11224 609-613 IN denotes with
T11225 614-624 VB denotes stimulated
T11226 625-629 NN denotes BMDC
T11227 631-635 DT denotes Both
T11228 636-644 JJ denotes negative
T11229 645-653 NN denotes controls
T11230 654-658 VB denotes show
T11231 659-661 DT denotes no
T11232 662-672 NN denotes production
T11233 673-675 IN denotes of
T11234 676-690 JJ denotes aforementioned
T11235 691-700 NN denotes cytokines
R9225 T11114 T11113 arg1Of vitro,in
R9226 T11115 T11111 arg1Of interaction,BMDC-T
R9227 T11115 T11112 arg1Of interaction,cell
R9228 T11115 T11114 arg1Of interaction,vitro
R9229 T11116 T11117 arg1Of WT,and
R9230 T11118 T11117 arg2Of cpdm,and
R9231 T11119 T11116 arg1Of BMDC,WT
R9232 T11119 T11118 arg1Of BMDC,cpdm
R9233 T11119 T11120 arg1Of BMDC,(
R9234 T11119 T11123 arg1Of BMDC,were
R9235 T11119 T11124 arg2Of BMDC,stimulated
R9236 T11121 T11120 arg2Of 5×104,(
R9237 T11122 T11120 arg3Of ),(
R9238 T11124 T11123 arg2Of stimulated,were
R9239 T11124 T11125 arg1Of stimulated,with
R9240 T11126 T11127 arg1Of medium,","
R9241 T11127 T11131 arg1Of ",",","
R9242 T11130 T11127 arg2Of LPS,","
R9243 T11130 T11128 arg1Of LPS,1
R9244 T11130 T11129 arg1Of LPS,µg/mL
R9245 T11131 T11134 arg1Of ",",and
R9246 T11133 T11131 arg2Of µg/mL,","
R9247 T11133 T11132 arg1Of µg/mL,25
R9248 T11134 T11125 arg2Of and,with
R9249 T11137 T11134 arg2Of Pam3CYS,and
R9250 T11137 T11135 arg1Of Pam3CYS,5
R9251 T11137 T11136 arg1Of Pam3CYS,µg/mL
R9252 T11139 T11138 arg1Of hours,24
R9253 T11140 T11139 arg1Of later,hours
R9254 T11142 T11143 arg1Of cells,were
R9255 T11142 T11144 arg2Of cells,collected
R9256 T11142 T11146 arg2Of cells,washed
R9257 T11144 T11145 arg1Of collected,and
R9258 T11145 T11140 arg1Of and,later
R9259 T11145 T11141 arg1Of and,","
R9260 T11145 T11143 arg2Of and,were
R9261 T11146 T11145 arg2Of washed,and
R9262 T11146 T11147 arg1Of washed,with
R9263 T11148 T11147 arg2Of PBS,with
R9264 T11153 T11149 arg1Of cells,Allogeneic
R9265 T11153 T11150 arg1Of cells,naïve
R9266 T11153 T11151 arg1Of cells,CD4+
R9267 T11153 T11152 arg1Of cells,T
R9268 T11153 T11154 arg1Of cells,were
R9269 T11153 T11155 arg2Of cells,isolated
R9270 T11153 T11169 arg1Of cells,were
R9271 T11153 T11171 arg2Of cells,added
R9272 T11153 T11175 arg2Of cells,co-cultured
R9273 T11155 T11154 arg2Of isolated,were
R9274 T11155 T11156 arg1Of isolated,from
R9275 T11155 T11168 arg1Of isolated,and
R9276 T11157 T11156 arg2Of spleens,from
R9277 T11157 T11158 arg1Of spleens,of
R9278 T11157 T11161 arg1Of spleens,by
R9279 T11160 T11158 arg2Of mice,of
R9280 T11160 T11159 arg1Of mice,BALB/c
R9281 T11164 T11161 arg2Of kit,by
R9282 T11164 T11162 arg1Of kit,negative
R9283 T11164 T11163 arg1Of kit,selection
R9284 T11164 T11165 arg1Of kit,(
R9285 T11166 T11165 arg2Of Invitrogen,(
R9286 T11167 T11165 arg3Of ),(
R9287 T11171 T11172 arg1Of added,at
R9288 T11171 T11174 arg1Of added,and
R9289 T11173 T11172 arg2Of 2.5×105,at
R9290 T11174 T11168 arg2Of and,and
R9291 T11174 T11169 arg2Of and,were
R9292 T11174 T11170 arg1Of and,then
R9293 T11175 T11174 arg2Of co-cultured,and
R9294 T11175 T11176 arg1Of co-cultured,with
R9295 T11178 T11176 arg2Of BMDC,with
R9296 T11178 T11177 arg2Of BMDC,activated
R9297 T11181 T11179 arg2Of days,After
R9298 T11181 T11180 arg1Of days,5
R9299 T11183 T11184 arg1Of supernatant,was
R9300 T11183 T11185 arg2Of supernatant,collected
R9301 T11185 T11184 arg2Of collected,was
R9302 T11185 T11186 arg1Of collected,and
R9303 T11186 T11179 arg1Of and,After
R9304 T11186 T11182 arg1Of and,","
R9305 T11188 T11187 arg1Of secretion,the
R9306 T11188 T11189 arg1Of secretion,of
R9307 T11188 T11198 arg2Of secretion,measured
R9308 T11190 T11191 arg1Of IFNγ,","
R9309 T11191 T11193 arg1Of ",",","
R9310 T11192 T11191 arg2Of IL4,","
R9311 T11193 T11196 arg1Of ",",and
R9312 T11194 T11193 arg2Of IL2,","
R9313 T11196 T11189 arg2Of and,of
R9314 T11196 T11195 arg1Of and,","
R9315 T11197 T11196 arg2Of IL17A,and
R9316 T11198 T11186 arg2Of measured,and
R9317 T11200 T11198 arg1Of ELISA,measured
R9318 T11200 T11199 arg2Of ELISA,by
R9319 T11202 T11201 arg1Of controls,Negative
R9320 T11202 T11203 arg1Of controls,are
R9321 T11204 T11206 arg1Of 1,stimulated
R9322 T11206 T11203 arg2Of stimulated,are
R9323 T11206 T11205 arg1Of stimulated,)
R9324 T11206 T11208 arg1Of stimulated,without
R9325 T11207 T11206 arg2Of BMDC,stimulated
R9326 T11209 T11208 arg2Of co-culture,without
R9327 T11209 T11210 arg1Of co-culture,with
R9328 T11214 T11211 arg1Of cells,allogeneic
R9329 T11214 T11212 arg1Of cells,CD4+
R9330 T11214 T11213 arg1Of cells,T
R9331 T11214 T11215 arg1Of cells,;
R9332 T11215 T11210 arg2Of ;,with
R9333 T11216 T11217 arg1Of 2,)
R9334 T11221 T11215 arg2Of cells,;
R9335 T11221 T11216 arg1Of cells,2
R9336 T11221 T11218 arg1Of cells,allogeneic
R9337 T11221 T11219 arg1Of cells,CD4+
R9338 T11221 T11220 arg1Of cells,T
R9339 T11221 T11222 arg1Of cells,without
R9340 T11223 T11222 arg2Of co-culture,without
R9341 T11223 T11224 arg1Of co-culture,with
R9342 T11226 T11224 arg2Of BMDC,with
R9343 T11226 T11225 arg2Of BMDC,stimulated
R9344 T11229 T11227 arg1Of controls,Both
R9345 T11229 T11228 arg1Of controls,negative
R9346 T11229 T11230 arg1Of controls,show
R9347 T11232 T11230 arg2Of production,show
R9348 T11232 T11231 arg1Of production,no
R9349 T11232 T11233 arg1Of production,of
R9350 T11235 T11233 arg2Of cytokines,of
R9351 T11235 T11234 arg1Of cytokines,aforementioned

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T11236 676-700 Anaphor denotes aforementioned cytokines
T11237 428-432 Antecedent denotes IFNγ
T11238 434-437 Antecedent denotes IL4
T11239 439-442 Antecedent denotes IL2
T11240 448-453 Antecedent denotes IL17A
R9352 T11236 T11237 boundBy aforementioned cytokines,IFNγ
R9353 T11236 T11238 boundBy aforementioned cytokines,IL4
R9354 T11236 T11239 boundBy aforementioned cytokines,IL2
R9355 T11236 T11240 boundBy aforementioned cytokines,IL17A

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10967 0-6 NNP denotes BMDC-T
T10968 7-11 NN denotes cell
T10969 12-14 IN denotes in
T10970 15-20 NN denotes vitro
T10971 21-32 NN denotes interaction
T10972 33-35 NNP denotes WT
T10973 36-39 CC denotes and
T10974 40-44 VB denotes cpdm
T10975 45-49 NNP denotes BMDC
T10976 50-51 -LRB- denotes (
T10977 51-52 CD denotes 5
T10978 52-53 CD denotes ×
T10979 53-56 CD denotes 104
T10980 56-57 -RRB- denotes )
T10981 58-62 VBD denotes were
T10982 63-73 VBN denotes stimulated
T10983 74-78 IN denotes with
T10984 79-85 NN denotes medium
T10985 85-86 , denotes ,
T10986 87-88 CD denotes 1
T10987 89-91 NN denotes µg
T10988 91-92 NN denotes /
T10989 92-94 NNP denotes mL
T10990 95-98 NNP denotes LPS
T10991 98-99 , denotes ,
T10992 100-102 CD denotes 25
T10993 103-105 NN denotes µg
T10994 105-106 NN denotes /
T10995 106-108 NNP denotes mL
T10996 109-112 CC denotes and
T10997 113-114 CD denotes 5
T10998 115-117 NN denotes µg
T10999 117-118 NN denotes /
T11000 118-120 NNP denotes mL
T11001 121-128 NNP denotes Pam3CYS
T11002 128-129 . denotes .
T11003 130-132 CD denotes 24
T11004 133-138 NNS denotes hours
T11005 139-144 RB denotes later
T11006 144-145 , denotes ,
T11007 146-151 NNS denotes cells
T11008 152-156 VBD denotes were
T11009 157-166 VBN denotes collected
T11010 167-170 CC denotes and
T11011 171-177 VBN denotes washed
T11012 178-182 IN denotes with
T11013 183-186 NNP denotes PBS
T11014 186-187 . denotes .
T11015 188-198 JJ denotes Allogeneic
T11016 199-204 NN denotes naïve
T11017 205-208 NNP denotes CD4
T11018 208-209 NNP denotes +
T11019 210-211 NNP denotes T
T11020 212-217 NNS denotes cells
T11021 218-222 VBD denotes were
T11022 223-231 VBN denotes isolated
T11023 232-236 IN denotes from
T11024 237-244 NNS denotes spleens
T11025 245-247 IN denotes of
T11026 248-254 NNP denotes BALB/c
T11027 255-259 NNS denotes mice
T11028 260-262 IN denotes by
T11029 263-271 JJ denotes negative
T11030 272-281 NN denotes selection
T11031 282-285 NN denotes kit
T11032 286-287 -LRB- denotes (
T11033 287-297 NNP denotes Invitrogen
T11034 297-298 -RRB- denotes )
T11035 299-302 CC denotes and
T11036 303-307 VBD denotes were
T11037 308-312 RB denotes then
T11038 313-318 VBN denotes added
T11039 319-321 IN denotes at
T11040 322-325 CD denotes 2.5
T11041 325-326 CD denotes ×
T11042 326-329 CD denotes 105
T11043 330-333 CC denotes and
T11044 334-345 JJ denotes co-cultured
T11045 346-350 IN denotes with
T11046 351-360 VBN denotes activated
T11047 361-365 NNP denotes BMDC
T11048 365-366 . denotes .
T11049 367-372 IN denotes After
T11050 373-374 CD denotes 5
T11051 375-379 NNS denotes days
T11052 379-380 , denotes ,
T11053 381-392 NN denotes supernatant
T11054 393-396 VBD denotes was
T11055 397-406 VBN denotes collected
T11056 407-410 CC denotes and
T11057 411-414 DT denotes the
T11058 415-424 NN denotes secretion
T11059 425-427 IN denotes of
T11060 428-432 NNP denotes IFNγ
T11061 432-433 , denotes ,
T11062 434-437 NNP denotes IL4
T11063 437-438 , denotes ,
T11064 439-442 NNP denotes IL2
T11065 442-443 , denotes ,
T11066 444-447 CC denotes and
T11067 448-453 NNP denotes IL17A
T11068 454-462 VBN denotes measured
T11069 463-465 IN denotes by
T11070 466-471 NNP denotes ELISA
T11071 471-472 . denotes .
T11072 473-481 JJ denotes Negative
T11073 482-490 NNS denotes controls
T11074 491-494 VBP denotes are
T11075 495-496 CD denotes 1
T11076 496-497 -RRB- denotes )
T11077 498-508 VBD denotes stimulated
T11078 509-513 NNP denotes BMDC
T11079 514-521 IN denotes without
T11080 522-532 NN denotes co-culture
T11081 533-537 IN denotes with
T11082 538-548 JJ denotes allogeneic
T11083 549-552 NNP denotes CD4
T11084 552-553 CD denotes +
T11085 554-555 NNP denotes T
T11086 556-561 NNS denotes cells
T11087 561-562 : denotes ;
T11088 563-564 LS denotes 2
T11089 564-565 -RRB- denotes )
T11090 566-576 JJ denotes allogeneic
T11091 577-580 NNP denotes CD4
T11092 580-581 CD denotes +
T11093 582-583 NNP denotes T
T11094 584-589 NNS denotes cells
T11095 590-597 IN denotes without
T11096 598-608 NN denotes co-culture
T11097 609-613 IN denotes with
T11098 614-624 VBN denotes stimulated
T11099 625-629 NNP denotes BMDC
T11100 629-630 . denotes .
T11101 631-635 DT denotes Both
T11102 636-644 JJ denotes negative
T11103 645-653 NNS denotes controls
T11104 654-658 VBP denotes show
T11105 659-661 DT denotes no
T11106 662-672 NN denotes production
T11107 673-675 IN denotes of
T11108 676-690 JJ denotes aforementioned
T11109 691-700 NNS denotes cytokines
T11110 700-701 . denotes .
R9081 T10967 T10968 compound BMDC-T,cell
R9082 T10968 T10982 nsubjpass cell,stimulated
R9083 T10969 T10968 prep in,cell
R9084 T10970 T10971 amod vitro,interaction
R9085 T10971 T10969 pobj interaction,in
R9086 T10972 T10968 npadvmod WT,cell
R9087 T10973 T10968 cc and,cell
R9088 T10974 T10975 compound cpdm,BMDC
R9089 T10975 T10968 conj BMDC,cell
R9090 T10976 T10975 punct (,BMDC
R9091 T10977 T10979 nummod 5,104
R9092 T10978 T10979 nummod ×,104
R9093 T10979 T10975 appos 104,BMDC
R9094 T10980 T10975 punct ),BMDC
R9095 T10981 T10982 auxpass were,stimulated
R9096 T10982 T10982 ROOT stimulated,stimulated
R9097 T10983 T10982 prep with,stimulated
R9098 T10984 T10983 pobj medium,with
R9099 T10985 T10984 punct ",",medium
R9100 T10986 T10987 nummod 1,µg
R9101 T10987 T10990 compound µg,LPS
R9102 T10988 T10990 compound /,LPS
R9103 T10989 T10990 compound mL,LPS
R9104 T10990 T10984 appos LPS,medium
R9105 T10991 T10990 punct ",",LPS
R9106 T10992 T10995 nummod 25,mL
R9107 T10993 T10995 compound µg,mL
R9108 T10994 T10995 compound /,mL
R9109 T10995 T10990 conj mL,LPS
R9110 T10996 T10995 cc and,mL
R9111 T10997 T10999 nummod 5,/
R9112 T10998 T10999 compound µg,/
R9113 T10999 T11001 compound /,Pam3CYS
R9114 T11000 T11001 compound mL,Pam3CYS
R9115 T11001 T10995 conj Pam3CYS,mL
R9116 T11002 T10982 punct .,stimulated
R9117 T11003 T11004 nummod 24,hours
R9118 T11004 T11005 npadvmod hours,later
R9119 T11005 T11009 advmod later,collected
R9120 T11006 T11009 punct ",",collected
R9121 T11007 T11009 nsubjpass cells,collected
R9122 T11008 T11009 auxpass were,collected
R9123 T11009 T11009 ROOT collected,collected
R9124 T11010 T11009 cc and,collected
R9125 T11011 T11009 conj washed,collected
R9126 T11012 T11011 prep with,washed
R9127 T11013 T11012 pobj PBS,with
R9128 T11014 T11009 punct .,collected
R9129 T11015 T11016 amod Allogeneic,naïve
R9130 T11016 T11020 compound naïve,cells
R9131 T11017 T11020 compound CD4,cells
R9132 T11018 T11020 compound +,cells
R9133 T11019 T11020 compound T,cells
R9134 T11020 T11021 nsubj cells,were
R9135 T11021 T11021 ROOT were,were
R9136 T11022 T11021 acomp isolated,were
R9137 T11023 T11022 prep from,isolated
R9138 T11024 T11023 pobj spleens,from
R9139 T11025 T11024 prep of,spleens
R9140 T11026 T11027 compound BALB/c,mice
R9141 T11027 T11025 pobj mice,of
R9142 T11028 T11022 parataxis by,isolated
R9143 T11029 T11031 amod negative,kit
R9144 T11030 T11031 compound selection,kit
R9145 T11031 T11028 pobj kit,by
R9146 T11032 T11031 punct (,kit
R9147 T11033 T11031 appos Invitrogen,kit
R9148 T11034 T11022 punct ),isolated
R9149 T11035 T11021 cc and,were
R9150 T11036 T11038 auxpass were,added
R9151 T11037 T11038 advmod then,added
R9152 T11038 T11021 conj added,were
R9153 T11039 T11038 prep at,added
R9154 T11040 T11042 nummod 2.5,105
R9155 T11041 T11042 nummod ×,105
R9156 T11042 T11039 pobj 105,at
R9157 T11043 T11038 cc and,added
R9158 T11044 T11038 conj co-cultured,added
R9159 T11045 T11044 prep with,co-cultured
R9160 T11046 T11047 amod activated,BMDC
R9161 T11047 T11045 pobj BMDC,with
R9162 T11048 T11021 punct .,were
R9163 T11049 T11055 prep After,collected
R9164 T11050 T11051 nummod 5,days
R9165 T11051 T11049 pobj days,After
R9166 T11052 T11055 punct ",",collected
R9167 T11053 T11055 nsubjpass supernatant,collected
R9168 T11054 T11055 auxpass was,collected
R9169 T11055 T11055 ROOT collected,collected
R9170 T11056 T11055 cc and,collected
R9171 T11057 T11058 det the,secretion
R9172 T11058 T11055 conj secretion,collected
R9173 T11059 T11058 prep of,secretion
R9174 T11060 T11059 pobj IFNγ,of
R9175 T11061 T11060 punct ",",IFNγ
R9176 T11062 T11060 conj IL4,IFNγ
R9177 T11063 T11062 punct ",",IL4
R9178 T11064 T11062 conj IL2,IL4
R9179 T11065 T11064 punct ",",IL2
R9180 T11066 T11064 cc and,IL2
R9181 T11067 T11064 conj IL17A,IL2
R9182 T11068 T11058 acl measured,secretion
R9183 T11069 T11068 agent by,measured
R9184 T11070 T11069 pobj ELISA,by
R9185 T11071 T11055 punct .,collected
R9186 T11072 T11073 amod Negative,controls
R9187 T11073 T11074 nsubj controls,are
R9188 T11074 T11098 ccomp are,stimulated
R9189 T11075 T11074 attr 1,are
R9190 T11076 T11075 punct ),1
R9191 T11077 T11074 advcl stimulated,are
R9192 T11078 T11077 dobj BMDC,stimulated
R9193 T11079 T11077 prep without,stimulated
R9194 T11080 T11079 pobj co-culture,without
R9195 T11081 T11077 prep with,stimulated
R9196 T11082 T11086 amod allogeneic,cells
R9197 T11083 T11086 compound CD4,cells
R9198 T11084 T11086 nummod +,cells
R9199 T11085 T11086 compound T,cells
R9200 T11086 T11081 pobj cells,with
R9201 T11087 T11098 punct ;,stimulated
R9202 T11088 T11094 meta 2,cells
R9203 T11089 T11088 punct ),2
R9204 T11090 T11094 amod allogeneic,cells
R9205 T11091 T11094 compound CD4,cells
R9206 T11092 T11094 nummod +,cells
R9207 T11093 T11094 compound T,cells
R9208 T11094 T11098 nsubj cells,stimulated
R9209 T11095 T11094 prep without,cells
R9210 T11096 T11095 pobj co-culture,without
R9211 T11097 T11094 prep with,cells
R9212 T11098 T11098 ROOT stimulated,stimulated
R9213 T11099 T11098 dobj BMDC,stimulated
R9214 T11100 T11098 punct .,stimulated
R9215 T11101 T11103 det Both,controls
R9216 T11102 T11103 amod negative,controls
R9217 T11103 T11104 nsubj controls,show
R9218 T11104 T11104 ROOT show,show
R9219 T11105 T11106 det no,production
R9220 T11106 T11104 dobj production,show
R9221 T11107 T11106 prep of,production
R9222 T11108 T11109 amod aforementioned,cytokines
R9223 T11109 T11107 pobj cytokines,of
R9224 T11110 T11104 punct .,show

UBERON-AE

Id Subject Object Predicate Lexical cue
T10947 237-244 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleens

GO-BP

Id Subject Object Predicate Lexical cue
T11254 415-424 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion

GO-CC

Id Subject Object Predicate Lexical cue
T11255 7-11 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T11256 146-151 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T11257 212-217 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T11258 556-561 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T11259 584-589 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T10960 0-32 Sentence denotes BMDC-T cell in vitro interaction
T10961 33-129 Sentence denotes WT and cpdm BMDC (5×104) were stimulated with medium, 1 µg/mL LPS, 25 µg/mL and 5 µg/mL Pam3CYS.
T10962 130-187 Sentence denotes 24 hours later, cells were collected and washed with PBS.
T10963 188-366 Sentence denotes Allogeneic naïve CD4+ T cells were isolated from spleens of BALB/c mice by negative selection kit (Invitrogen) and were then added at 2.5×105 and co-cultured with activated BMDC.
T10964 367-472 Sentence denotes After 5 days, supernatant was collected and the secretion of IFNγ, IL4, IL2, and IL17A measured by ELISA.
T10965 473-630 Sentence denotes Negative controls are 1) stimulated BMDC without co-culture with allogeneic CD4+ T cells; 2) allogeneic CD4+ T cells without co-culture with stimulated BMDC.
T10966 631-701 Sentence denotes Both negative controls show no production of aforementioned cytokines.
T204 0-32 Sentence denotes BMDC-T cell in vitro interaction
T205 33-129 Sentence denotes WT and cpdm BMDC (5×104) were stimulated with medium, 1 µg/mL LPS, 25 µg/mL and 5 µg/mL Pam3CYS.
T206 130-187 Sentence denotes 24 hours later, cells were collected and washed with PBS.
T207 188-366 Sentence denotes Allogeneic naïve CD4+ T cells were isolated from spleens of BALB/c mice by negative selection kit (Invitrogen) and were then added at 2.5×105 and co-cultured with activated BMDC.
T208 367-472 Sentence denotes After 5 days, supernatant was collected and the secretion of IFNγ, IL4, IL2, and IL17A measured by ELISA.
T209 473-630 Sentence denotes Negative controls are 1) stimulated BMDC without co-culture with allogeneic CD4+ T cells; 2) allogeneic CD4+ T cells without co-culture with stimulated BMDC.
T210 631-701 Sentence denotes Both negative controls show no production of aforementioned cytokines.

events-check-again

Id Subject Object Predicate Lexical cue Negation Speculation
T11284 415-424 Gene_expression denotes secretion true
T11285 415-424 Gene_expression denotes secretion true
T11286 415-424 Gene_expression denotes secretion true
T11287 415-424 Gene_expression denotes secretion true
T11288 428-432 Protein denotes IFNγ
T11289 434-437 Protein denotes IL4
T11290 439-442 Protein denotes IL2
T11291 448-453 Protein denotes IL17A
T11292 662-672 Gene_expression denotes production true
T11293 662-672 Gene_expression denotes production true
T11294 662-672 Gene_expression denotes production true
T11295 662-672 Gene_expression denotes production true
R9372 T11288 T11292 themeOf IFNγ,production
R9373 T11288 T11287 themeOf IFNγ,secretion
R9374 T11289 T11293 themeOf IL4,production
R9375 T11289 T11286 themeOf IL4,secretion
R9376 T11290 T11294 themeOf IL2,production
R9377 T11290 T11284 themeOf IL2,secretion
R9378 T11291 T11295 themeOf IL17A,production
R9379 T11291 T11285 themeOf IL17A,secretion

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T11296 205-209 Protein denotes CD4+
T11297 428-432 Protein denotes IFNγ
T11298 434-437 Protein denotes IL4
T11299 439-442 Protein denotes IL2
T11300 448-453 Protein denotes IL17A
T11301 415-424 Localization denotes secretion
T11302 415-424 Localization denotes secretion
T11303 415-424 Localization denotes secretion
T11304 415-424 Localization denotes secretion
R9380 T11297 T11301 themeOf IFNγ,secretion
R9381 T11298 T11302 themeOf IL4,secretion
R9382 T11299 T11303 themeOf IL2,secretion
R9383 T11300 T11304 themeOf IL17A,secretion

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation Speculation
T10948 415-424 Gene_expression denotes secretion true
T10949 415-424 Gene_expression denotes secretion true
T10950 415-424 Gene_expression denotes secretion true
T10951 415-424 Gene_expression denotes secretion true
T10952 428-432 Protein denotes IFNγ
T10953 434-437 Protein denotes IL4
T10954 439-442 Protein denotes IL2
T10955 448-453 Protein denotes IL17A
T10956 662-672 Gene_expression denotes production true
T10957 662-672 Gene_expression denotes production true
T10958 662-672 Gene_expression denotes production true
T10959 662-672 Gene_expression denotes production true
R9076 T10953 T10950 themeOf IL4,secretion
R9077 T10954 T10958 themeOf IL2,production
R9078 T10954 T10948 themeOf IL2,secretion
R9079 T10955 T10959 themeOf IL17A,production
R9080 T10955 T10949 themeOf IL17A,secretion
R9073 T10952 T10956 themeOf IFNγ,production
R9074 T10952 T10951 themeOf IFNγ,secretion
R9075 T10953 T10957 themeOf IL4,production

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T11241 205-208 P01730 denotes CD4
T11242 434-437 P05112 denotes IL4
T11243 439-442 P60568 denotes IL2
T11244 448-453 Q16552 denotes IL17A
T11245 549-552 P01730 denotes CD4
T11246 577-580 P01730 denotes CD4