PMC:3279418 / 24797-24990
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
22348129-19686699-89575719 | 189-191 | 19686699 | denotes | 18 |
T66479 | 189-191 | 19686699 | denotes | 18 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T8841 | 0-3 | DT | denotes | The |
T8842 | 4-13 | JJ | denotes | defective |
T8843 | 14-19 | NN | denotes | NF-κB |
T8844 | 20-30 | NN | denotes | activation |
T8845 | 31-33 | IN | denotes | by |
T8846 | 34-38 | DT | denotes | both |
T8847 | 39-46 | NN | denotes | stimuli |
T8848 | 47-55 | VB | denotes | suggests |
T8849 | 56-60 | IN | denotes | that |
T8850 | 61-64 | DT | denotes | the |
T8851 | 65-72 | NNP | denotes | Sharpin |
T8852 | 73-81 | NN | denotes | mutation |
T8853 | 82-92 | VB | denotes | interferes |
T8854 | 93-97 | IN | denotes | with |
T8855 | 98-101 | DT | denotes | the |
T8856 | 102-109 | NN | denotes | protein |
T8857 | 110-118 | NN | denotes | adaptors |
T8858 | 119-121 | CC | denotes | or |
T8859 | 122-129 | NN | denotes | kinases |
T8860 | 130-136 | VB | denotes | shared |
T8861 | 137-139 | IN | denotes | by |
T8862 | 140-144 | CC | denotes | both |
T8863 | 145-154 | NN | denotes | signaling |
T8864 | 155-163 | NN | denotes | pathways |
T8865 | 163-164 | -COMMA- | denotes | , |
T8866 | 165-169 | JJ | denotes | such |
T8867 | 170-172 | IN | denotes | as |
T8868 | 173-177 | NN | denotes | RIP1 |
T8869 | 178-181 | CC | denotes | and |
T8870 | 182-187 | NN | denotes | TRAF6 |
T8871 | 188-189 | -LRB- | denotes | [ |
T8872 | 189-191 | CD | denotes | 18 |
T8873 | 191-192 | -RRB- | denotes | ] |
R7429 | T8844 | T8841 | arg1Of | activation,The |
R7430 | T8844 | T8842 | arg1Of | activation,defective |
R7431 | T8844 | T8843 | arg1Of | activation,NF-κB |
R7432 | T8844 | T8845 | arg1Of | activation,by |
R7433 | T8844 | T8848 | arg1Of | activation,suggests |
R7434 | T8847 | T8845 | arg2Of | stimuli,by |
R7435 | T8847 | T8846 | arg1Of | stimuli,both |
R7437 | T8852 | T8850 | arg1Of | mutation,the |
R7438 | T8852 | T8851 | arg1Of | mutation,Sharpin |
R7439 | T8852 | T8853 | arg1Of | mutation,interferes |
R7441 | T8853 | T8848 | arg2Of | interferes,suggests |
R7442 | T8853 | T8849 | arg1Of | interferes,that |
R7443 | T8853 | T8854 | arg1Of | interferes,with |
R7445 | T8857 | T8858 | arg1Of | adaptors,or |
R7447 | T8858 | T8854 | arg2Of | or,with |
R7448 | T8858 | T8855 | arg1Of | or,the |
R7449 | T8858 | T8856 | arg1Of | or,protein |
R7450 | T8858 | T8860 | arg2Of | or,shared |
R7451 | T8859 | T8858 | arg2Of | kinases,or |
R7452 | T8864 | T8860 | arg1Of | pathways,shared |
R7453 | T8864 | T8861 | arg2Of | pathways,by |
R7454 | T8864 | T8862 | arg1Of | pathways,both |
R7455 | T8864 | T8863 | arg1Of | pathways,signaling |
R7456 | T8864 | T8865 | arg1Of | pathways,"," |
R7457 | T8864 | T8867 | arg1Of | pathways,as |
R7458 | T8867 | T8866 | arg1Of | as,such |
R7459 | T8868 | T8869 | arg1Of | RIP1,and |
R7461 | T8869 | T8867 | arg2Of | and,as |
R7465 | T8869 | T8871 | arg1Of | and,[ |
R7467 | T8870 | T8869 | arg2Of | TRAF6,and |
R7468 | T8872 | T8871 | arg2Of | 18,[ |
R7469 | T8873 | T8871 | arg3Of | ],[ |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7737 | 0-3 | DT | denotes | The |
T7738 | 4-13 | JJ | denotes | defective |
T7739 | 14-19 | NN | denotes | NF-κB |
T7740 | 20-30 | NN | denotes | activation |
T7741 | 31-33 | IN | denotes | by |
T7742 | 34-38 | DT | denotes | both |
T7743 | 39-46 | NNS | denotes | stimuli |
T7744 | 47-55 | VBZ | denotes | suggests |
T7745 | 56-60 | IN | denotes | that |
T7746 | 61-64 | DT | denotes | the |
T7747 | 65-72 | NNP | denotes | Sharpin |
T7748 | 73-81 | NN | denotes | mutation |
T7749 | 82-92 | VBZ | denotes | interferes |
T7750 | 93-97 | IN | denotes | with |
T7751 | 98-101 | DT | denotes | the |
T7752 | 102-109 | NN | denotes | protein |
T7753 | 110-118 | NNS | denotes | adaptors |
T7754 | 119-121 | CC | denotes | or |
T7755 | 122-129 | NNS | denotes | kinases |
T7756 | 130-136 | VBN | denotes | shared |
T7757 | 137-139 | IN | denotes | by |
T7758 | 140-144 | DT | denotes | both |
T7759 | 145-154 | VBG | denotes | signaling |
T7760 | 155-163 | NNS | denotes | pathways |
T7761 | 163-164 | , | denotes | , |
T7762 | 165-169 | JJ | denotes | such |
T7763 | 170-172 | IN | denotes | as |
T7764 | 173-177 | CD | denotes | RIP1 |
T7765 | 178-181 | CC | denotes | and |
T7766 | 182-187 | CD | denotes | TRAF6 |
T7767 | 188-189 | NNP | denotes | [ |
T7768 | 189-191 | CD | denotes | 18 |
T7769 | 191-192 | NNP | denotes | ] |
T7770 | 192-193 | . | denotes | . |
R6343 | T7737 | T7740 | det | The,activation |
R6344 | T7738 | T7740 | amod | defective,activation |
R6345 | T7739 | T7740 | compound | NF-κB,activation |
R6346 | T7740 | T7744 | nsubj | activation,suggests |
R6347 | T7741 | T7740 | prep | by,activation |
R6348 | T7742 | T7743 | det | both,stimuli |
R6349 | T7743 | T7741 | pobj | stimuli,by |
R6350 | T7744 | T7744 | ROOT | suggests,suggests |
R6351 | T7745 | T7749 | mark | that,interferes |
R6352 | T7746 | T7748 | det | the,mutation |
R6353 | T7747 | T7748 | compound | Sharpin,mutation |
R6354 | T7748 | T7749 | nsubj | mutation,interferes |
R6355 | T7749 | T7744 | ccomp | interferes,suggests |
R6356 | T7750 | T7749 | prep | with,interferes |
R6357 | T7751 | T7753 | det | the,adaptors |
R6358 | T7752 | T7753 | compound | protein,adaptors |
R6359 | T7753 | T7750 | pobj | adaptors,with |
R6360 | T7754 | T7753 | cc | or,adaptors |
R6361 | T7755 | T7753 | conj | kinases,adaptors |
R6362 | T7756 | T7753 | acl | shared,adaptors |
R6363 | T7757 | T7756 | agent | by,shared |
R6364 | T7758 | T7760 | det | both,pathways |
R6365 | T7759 | T7760 | amod | signaling,pathways |
R6366 | T7760 | T7757 | pobj | pathways,by |
R6367 | T7761 | T7760 | punct | ",",pathways |
R6368 | T7762 | T7763 | amod | such,as |
R6369 | T7763 | T7760 | prep | as,pathways |
R6370 | T7764 | T7763 | pobj | RIP1,as |
R6371 | T7765 | T7764 | cc | and,RIP1 |
R6372 | T7766 | T7764 | conj | TRAF6,RIP1 |
R6373 | T7767 | T7769 | nmod | [,] |
R6374 | T7768 | T7769 | nummod | 18,] |
R6375 | T7769 | T7760 | appos | ],pathways |
R6376 | T7770 | T7744 | punct | .,suggests |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9134 | 145-154 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T9169 | 14-30 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | NF-κB activation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6797 | 0-193 | Sentence | denotes | The defective NF-κB activation by both stimuli suggests that the Sharpin mutation interferes with the protein adaptors or kinases shared by both signaling pathways, such as RIP1 and TRAF6 [18]. |
T162 | 0-193 | Sentence | denotes | The defective NF-κB activation by both stimuli suggests that the Sharpin mutation interferes with the protein adaptors or kinases shared by both signaling pathways, such as RIP1 and TRAF6 [18]. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9431 | 65-72 | Protein | denotes | Sharpin |
T9432 | 73-81 | Negative_regulation | denotes | mutation |
T9433 | 173-177 | Protein | denotes | RIP1 |
T9434 | 182-187 | Protein | denotes | TRAF6 |
R7777 | T9431 | T9432 | themeOf | Sharpin,mutation |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9543 | 14-19 | Protein | denotes | NF-κB |
T9544 | 65-72 | Protein | denotes | Sharpin |
T9545 | 173-177 | Protein | denotes | RIP1 |
T9546 | 182-187 | Protein | denotes | TRAF6 |
T9547 | 20-30 | Positive_regulation | denotes | activation |
T9548 | 82-92 | Binding | denotes | interferes |
T9549 | 82-92 | Binding | denotes | interferes |
T9550 | 82-92 | Binding | denotes | interferes |
R7798 | T9543 | T9547 | themeOf | NF-κB,activation |
R7799 | T9544 | T9548 | themeOf | Sharpin,interferes |
R7800 | T9544 | T9549 | themeOf | Sharpin,interferes |
R7801 | T9544 | T9550 | themeOf | Sharpin,interferes |
R7802 | T9545 | T9549 | themeOf | RIP1,interferes |
R7803 | T9546 | T9550 | themeOf | TRAF6,interferes |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6743 | 65-72 | Protein | denotes | Sharpin |
T6744 | 73-81 | Negative_regulation | denotes | mutation |
T6745 | 173-177 | Protein | denotes | RIP1 |
T6746 | 182-187 | Protein | denotes | TRAF6 |
R5396 | T6743 | T6744 | themeOf | Sharpin,mutation |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9073 | 65-72 | Q9H0F6 | denotes | Sharpin |
T9074 | 173-177 | Q13546 | denotes | RIP1 |
T9075 | 182-187 | Q9Y4K3 | denotes | TRAF6 |