PMC:3279418 / 15594-15775
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5236 | 0-3 | DT | denotes | The |
T5237 | 4-10 | NN | denotes | amount |
T5238 | 11-13 | IN | denotes | of |
T5239 | 14-28 | VB | denotes | phosphorylated |
T5240 | 29-35 | NN | denotes | IKK1/2 |
T5241 | 36-37 | -LRB- | denotes | ( |
T5242 | 37-45 | NN | denotes | p-IKK1/2 |
T5243 | 45-46 | -RRB- | denotes | ) |
T5244 | 47-50 | CC | denotes | and |
T5245 | 51-55 | NN | denotes | IκBα |
T5246 | 56-57 | -LRB- | denotes | ( |
T5247 | 57-63 | NN | denotes | p-IκBα |
T5248 | 63-64 | -RRB- | denotes | ) |
T5249 | 65-74 | VB | denotes | following |
T5250 | 75-85 | NN | denotes | incubation |
T5251 | 86-90 | IN | denotes | with |
T5252 | 91-94 | NN | denotes | LPS |
T5253 | 95-97 | CC | denotes | or |
T5254 | 98-102 | NN | denotes | poly |
T5255 | 103-104 | NN | denotes | I |
T5256 | 104-105 | SYM | denotes | : |
T5257 | 105-106 | NN | denotes | C |
T5258 | 107-110 | VB | denotes | was |
T5259 | 111-119 | RB | denotes | severely |
T5260 | 120-129 | VB | denotes | decreased |
T5261 | 130-132 | IN | denotes | in |
T5262 | 133-137 | NN | denotes | cpdm |
T5263 | 138-142 | NN | denotes | BMDC |
T5264 | 143-145 | IN | denotes | as |
T5265 | 146-154 | VB | denotes | compared |
T5266 | 155-159 | IN | denotes | with |
T5267 | 160-162 | JJ | denotes | WT |
T5268 | 163-171 | NN | denotes | controls |
T5269 | 172-173 | -LRB- | denotes | ( |
T5270 | 173-177 | NN | denotes | Fig. |
T5271 | 178-179 | CD | denotes | 6 |
T5272 | 179-180 | -RRB- | denotes | ) |
R4370 | T5237 | T5236 | arg1Of | amount,The |
R4371 | T5237 | T5238 | arg1Of | amount,of |
R4372 | T5237 | T5249 | arg1Of | amount,following |
R4373 | T5237 | T5258 | arg1Of | amount,was |
R4374 | T5237 | T5260 | arg2Of | amount,decreased |
R4375 | T5240 | T5239 | arg2Of | IKK1/2,phosphorylated |
R4376 | T5240 | T5241 | arg1Of | IKK1/2,( |
R4377 | T5240 | T5244 | arg1Of | IKK1/2,and |
R4378 | T5242 | T5241 | arg2Of | p-IKK1/2,( |
R4379 | T5243 | T5241 | arg3Of | ),( |
R4380 | T5244 | T5238 | arg2Of | and,of |
R4381 | T5245 | T5244 | arg2Of | IκBα,and |
R4382 | T5245 | T5246 | arg1Of | IκBα,( |
R4383 | T5247 | T5246 | arg2Of | p-IκBα,( |
R4384 | T5248 | T5246 | arg3Of | ),( |
R4385 | T5250 | T5251 | arg1Of | incubation,with |
R4386 | T5250 | T5253 | arg1Of | incubation,or |
R4387 | T5252 | T5251 | arg2Of | LPS,with |
R4388 | T5253 | T5249 | arg2Of | or,following |
R4389 | T5257 | T5253 | arg2Of | C,or |
R4390 | T5257 | T5254 | arg1Of | C,poly |
R4391 | T5257 | T5255 | arg1Of | C,I |
R4392 | T5257 | T5256 | arg1Of | C,: |
R4393 | T5260 | T5258 | arg2Of | decreased,was |
R4394 | T5260 | T5259 | arg1Of | decreased,severely |
R4395 | T5260 | T5261 | arg1Of | decreased,in |
R4396 | T5260 | T5264 | arg1Of | decreased,as |
R4397 | T5263 | T5261 | arg2Of | BMDC,in |
R4398 | T5263 | T5262 | arg1Of | BMDC,cpdm |
R4399 | T5265 | T5264 | arg2Of | compared,as |
R4400 | T5265 | T5266 | arg1Of | compared,with |
R4401 | T5268 | T5266 | arg2Of | controls,with |
R4402 | T5268 | T5267 | arg1Of | controls,WT |
R4403 | T5268 | T5269 | arg1Of | controls,( |
R4404 | T5270 | T5269 | arg2Of | Fig.,( |
R4405 | T5270 | T5271 | arg1Of | Fig.,6 |
R4406 | T5272 | T5269 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4822 | 0-3 | DT | denotes | The |
T4823 | 4-10 | NN | denotes | amount |
T4824 | 11-13 | IN | denotes | of |
T4825 | 14-28 | VBN | denotes | phosphorylated |
T4826 | 29-35 | NNP | denotes | IKK1/2 |
T4827 | 36-37 | -LRB- | denotes | ( |
T4828 | 37-43 | JJ | denotes | p-IKK1 |
T4829 | 43-44 | NN | denotes | / |
T4830 | 44-45 | CD | denotes | 2 |
T4831 | 45-46 | -RRB- | denotes | ) |
T4832 | 47-50 | CC | denotes | and |
T4833 | 51-55 | NNP | denotes | IκBα |
T4834 | 56-57 | -LRB- | denotes | ( |
T4835 | 57-63 | NNP | denotes | p-IκBα |
T4836 | 63-64 | -RRB- | denotes | ) |
T4837 | 65-74 | VBG | denotes | following |
T4838 | 75-85 | NN | denotes | incubation |
T4839 | 86-90 | IN | denotes | with |
T4840 | 91-94 | NNP | denotes | LPS |
T4841 | 95-97 | CC | denotes | or |
T4842 | 98-102 | RB | denotes | poly |
T4843 | 103-104 | PRP | denotes | I |
T4844 | 104-105 | : | denotes | : |
T4845 | 105-106 | NNP | denotes | C |
T4846 | 107-110 | VBD | denotes | was |
T4847 | 111-119 | RB | denotes | severely |
T4848 | 120-129 | VBN | denotes | decreased |
T4849 | 130-132 | IN | denotes | in |
T4850 | 133-137 | NN | denotes | cpdm |
T4851 | 138-142 | NNP | denotes | BMDC |
T4852 | 143-145 | IN | denotes | as |
T4853 | 146-154 | VBN | denotes | compared |
T4854 | 155-159 | IN | denotes | with |
T4855 | 160-162 | NNP | denotes | WT |
T4856 | 163-171 | NNS | denotes | controls |
T4857 | 172-173 | -LRB- | denotes | ( |
T4858 | 173-177 | NN | denotes | Fig. |
T4859 | 178-179 | CD | denotes | 6 |
T4860 | 179-180 | -RRB- | denotes | ) |
T4861 | 180-181 | . | denotes | . |
R3957 | T4822 | T4823 | det | The,amount |
R3958 | T4823 | T4848 | nsubjpass | amount,decreased |
R3959 | T4824 | T4823 | prep | of,amount |
R3960 | T4825 | T4826 | amod | phosphorylated,IKK1/2 |
R3961 | T4826 | T4824 | pobj | IKK1/2,of |
R3962 | T4827 | T4826 | punct | (,IKK1/2 |
R3963 | T4828 | T4829 | amod | p-IKK1,/ |
R3964 | T4829 | T4826 | appos | /,IKK1/2 |
R3965 | T4830 | T4829 | nummod | 2,/ |
R3966 | T4831 | T4829 | punct | ),/ |
R3967 | T4832 | T4826 | cc | and,IKK1/2 |
R3968 | T4833 | T4826 | conj | IκBα,IKK1/2 |
R3969 | T4834 | T4835 | punct | (,p-IκBα |
R3970 | T4835 | T4833 | appos | p-IκBα,IκBα |
R3971 | T4836 | T4823 | punct | ),amount |
R3972 | T4837 | T4823 | acl | following,amount |
R3973 | T4838 | T4837 | pobj | incubation,following |
R3974 | T4839 | T4838 | prep | with,incubation |
R3975 | T4840 | T4839 | pobj | LPS,with |
R3976 | T4841 | T4837 | cc | or,following |
R3977 | T4842 | T4848 | advmod | poly,decreased |
R3978 | T4843 | T4848 | nsubjpass | I,decreased |
R3979 | T4844 | T4848 | punct | :,decreased |
R3980 | T4845 | T4848 | nsubjpass | C,decreased |
R3981 | T4846 | T4848 | auxpass | was,decreased |
R3982 | T4847 | T4848 | advmod | severely,decreased |
R3983 | T4848 | T4848 | ROOT | decreased,decreased |
R3984 | T4849 | T4848 | prep | in,decreased |
R3985 | T4850 | T4851 | compound | cpdm,BMDC |
R3986 | T4851 | T4849 | pobj | BMDC,in |
R3987 | T4852 | T4848 | prep | as,decreased |
R3988 | T4853 | T4852 | prep | compared,as |
R3989 | T4854 | T4853 | prep | with,compared |
R3990 | T4855 | T4856 | compound | WT,controls |
R3991 | T4856 | T4854 | pobj | controls,with |
R3992 | T4857 | T4858 | punct | (,Fig. |
R3993 | T4858 | T4856 | appos | Fig.,controls |
R3994 | T4859 | T4858 | nummod | 6,Fig. |
R3995 | T4860 | T4858 | punct | ),Fig. |
R3996 | T4861 | T4848 | punct | .,decreased |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4486 | 0-181 | Sentence | denotes | The amount of phosphorylated IKK1/2 (p-IKK1/2) and IκBα (p-IκBα) following incubation with LPS or poly I:C was severely decreased in cpdm BMDC as compared with WT controls (Fig. 6). |
T105 | 0-181 | Sentence | denotes | The amount of phosphorylated IKK1/2 (p-IKK1/2) and IκBα (p-IκBα) following incubation with LPS or poly I:C was severely decreased in cpdm BMDC as compared with WT controls (Fig. 6). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5609 | 14-28 | Phosphorylation | denotes | phosphorylated |
T5610 | 14-28 | Phosphorylation | denotes | phosphorylated |
T5611 | 14-28 | Phosphorylation | denotes | phosphorylated |
T5612 | 29-33 | Protein | denotes | IKK1 |
T5613 | 34-35 | Protein | denotes | 2 |
T5614 | 39-43 | Protein | denotes | IKK1 |
T5615 | 44-45 | Protein | denotes | 2 |
T5616 | 51-55 | Protein | denotes | IκBα |
T5617 | 59-63 | Protein | denotes | IκBα |
T5618 | 120-129 | Negative_regulation | denotes | decreased |
T5619 | 120-129 | Negative_regulation | denotes | decreased |
T5620 | 120-129 | Negative_regulation | denotes | decreased |
R4532 | T5609 | T5618 | themeOf | phosphorylated,decreased |
R4533 | T5610 | T5620 | themeOf | phosphorylated,decreased |
R4534 | T5611 | T5619 | themeOf | phosphorylated,decreased |
R4535 | T5612 | T5610 | themeOf | IKK1,phosphorylated |
R4536 | T5613 | T5609 | themeOf | 2,phosphorylated |
R4537 | T5616 | T5611 | themeOf | IκBα,phosphorylated |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4451 | 14-28 | Phosphorylation | denotes | phosphorylated |
T4452 | 14-28 | Phosphorylation | denotes | phosphorylated |
T4453 | 14-28 | Phosphorylation | denotes | phosphorylated |
T4454 | 29-33 | Protein | denotes | IKK1 |
T4455 | 34-35 | Protein | denotes | 2 |
T4456 | 39-43 | Protein | denotes | IKK1 |
T4457 | 44-45 | Protein | denotes | 2 |
T4458 | 51-55 | Protein | denotes | IκBα |
T4459 | 59-63 | Protein | denotes | IκBα |
T4460 | 120-129 | Negative_regulation | denotes | decreased |
T4461 | 120-129 | Negative_regulation | denotes | decreased |
T4462 | 120-129 | Negative_regulation | denotes | decreased |
R3614 | T4451 | T4460 | themeOf | phosphorylated,decreased |
R3615 | T4452 | T4462 | themeOf | phosphorylated,decreased |
R3616 | T4453 | T4461 | themeOf | phosphorylated,decreased |
R3617 | T4454 | T4452 | themeOf | IKK1,phosphorylated |
R3618 | T4455 | T4451 | themeOf | 2,phosphorylated |
R3619 | T4458 | T4453 | themeOf | IκBα,phosphorylated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5342 | 29-33 | O15111 | denotes | IKK1 |
T5343 | 29-33 | Q60680-2 | denotes | IKK1 |
T5344 | 39-43 | O15111 | denotes | IKK1 |
T5345 | 39-43 | Q60680-2 | denotes | IKK1 |
T5346 | 51-55 | P25963 | denotes | IκBα |
T5347 | 59-63 | P25963 | denotes | IκBα |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4390 | 14-28 | Phosphorylation | denotes | phosphorylated |
T4391 | 29-33 | Protein | denotes | IKK1 |
T4392 | 34-35 | Protein | denotes | 2 |
T4393 | 39-43 | Protein | denotes | IKK1 |
T4394 | 44-45 | Protein | denotes | 2 |
T4395 | 51-55 | Protein | denotes | IκBα |
T4396 | 59-63 | Protein | denotes | IκBα |
T4397 | 65-74 | Positive_regulation | denotes | following |
T4398 | 120-129 | Negative_regulation | denotes | decreased |
R3587 | T4391 | T4390 | themeOf | IKK1,phosphorylated |
R3588 | T4392 | T4390 | themeOf | 2,phosphorylated |
R3589 | T4395 | T4390 | themeOf | IκBα,phosphorylated |