PMC:3279418 / 12940-13284
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T4926","span":{"begin":0,"end":5},"obj":"EX"},{"id":"T4927","span":{"begin":6,"end":9},"obj":"VB"},{"id":"T4928","span":{"begin":10,"end":11},"obj":"DT"},{"id":"T4929","span":{"begin":12,"end":18},"obj":"NN"},{"id":"T4930","span":{"begin":19,"end":21},"obj":"IN"},{"id":"T4931","span":{"begin":22,"end":30},"obj":"JJ"},{"id":"T4932","span":{"begin":31,"end":43},"obj":"NN"},{"id":"T4933","span":{"begin":44,"end":47},"obj":"IN"},{"id":"T4934","span":{"begin":48,"end":51},"obj":"DT"},{"id":"T4935","span":{"begin":52,"end":61},"obj":"JJ"},{"id":"T4936","span":{"begin":62,"end":70},"obj":"NN"},{"id":"T4937","span":{"begin":71,"end":80},"obj":"NN"},{"id":"T4938","span":{"begin":81,"end":83},"obj":"IN"},{"id":"T4939","span":{"begin":84,"end":94},"obj":"VB"},{"id":"T4940","span":{"begin":95,"end":99},"obj":"NN"},{"id":"T4941","span":{"begin":100,"end":104},"obj":"NN"},{"id":"T4942","span":{"begin":104,"end":105},"obj":"-COMMA-"},{"id":"T4943","span":{"begin":106,"end":115},"obj":"VB"},{"id":"T4944","span":{"begin":116,"end":117},"obj":"CD"},{"id":"T4945","span":{"begin":117,"end":118},"obj":"-RRB-"},{"id":"T4946","span":{"begin":119,"end":126},"obj":"VB"},{"id":"T4947","span":{"begin":127,"end":134},"obj":"NN"},{"id":"T4948","span":{"begin":135,"end":145},"obj":"NN"},{"id":"T4949","span":{"begin":146,"end":148},"obj":"IN"},{"id":"T4950","span":{"begin":149,"end":152},"obj":"DT"},{"id":"T4951","span":{"begin":153,"end":156},"obj":"NN"},{"id":"T4952","span":{"begin":157,"end":165},"obj":"NN"},{"id":"T4953","span":{"begin":166,"end":173},"obj":"NN"},{"id":"T4954","span":{"begin":173,"end":174},"obj":"-COMMA-"},{"id":"T4955","span":{"begin":175,"end":176},"obj":"CD"},{"id":"T4956","span":{"begin":176,"end":177},"obj":"-RRB-"},{"id":"T4957","span":{"begin":178,"end":187},"obj":"VB"},{"id":"T4958","span":{"begin":188,"end":198},"obj":"NN"},{"id":"T4959","span":{"begin":199,"end":201},"obj":"IN"},{"id":"T4960","span":{"begin":202,"end":219},"obj":"JJ"},{"id":"T4961","span":{"begin":220,"end":229},"obj":"NN"},{"id":"T4962","span":{"begin":229,"end":230},"obj":"-COMMA-"},{"id":"T4963","span":{"begin":231,"end":232},"obj":"CD"},{"id":"T4964","span":{"begin":232,"end":233},"obj":"-RRB-"},{"id":"T4965","span":{"begin":234,"end":243},"obj":"VB"},{"id":"T4966","span":{"begin":244,"end":254},"obj":"NN"},{"id":"T4967","span":{"begin":255,"end":257},"obj":"IN"},{"id":"T4968","span":{"begin":258,"end":266},"obj":"JJ"},{"id":"T4969","span":{"begin":267,"end":277},"obj":"NN"},{"id":"T4970","span":{"begin":278,"end":280},"obj":"IN"},{"id":"T4971","span":{"begin":281,"end":284},"obj":"NN"},{"id":"T4972","span":{"begin":285,"end":293},"obj":"NN"},{"id":"T4973","span":{"begin":293,"end":294},"obj":"-COMMA-"},{"id":"T4974","span":{"begin":295,"end":298},"obj":"CC"},{"id":"T4975","span":{"begin":299,"end":300},"obj":"CD"},{"id":"T4976","span":{"begin":300,"end":301},"obj":"-RRB-"},{"id":"T4977","span":{"begin":302,"end":310},"obj":"JJ"},{"id":"T4978","span":{"begin":311,"end":322},"obj":"JJ"},{"id":"T4979","span":{"begin":323,"end":332},"obj":"NN"},{"id":"T4980","span":{"begin":333,"end":343},"obj":"NN"}],"relations":[{"id":"R4061","pred":"arg1Of","subj":"T4926","obj":"T4927"},{"id":"R4062","pred":"arg2Of","subj":"T4929","obj":"T4927"},{"id":"R4063","pred":"arg1Of","subj":"T4929","obj":"T4928"},{"id":"R4064","pred":"arg1Of","subj":"T4929","obj":"T4930"},{"id":"R4065","pred":"arg1Of","subj":"T4929","obj":"T4933"},{"id":"R4066","pred":"arg2Of","subj":"T4932","obj":"T4930"},{"id":"R4067","pred":"arg1Of","subj":"T4932","obj":"T4931"},{"id":"R4068","pred":"arg1Of","subj":"T4937","obj":"T4935"},{"id":"R4069","pred":"arg1Of","subj":"T4937","obj":"T4936"},{"id":"R4070","pred":"arg1Of","subj":"T4937","obj":"T4938"},{"id":"R4071","pred":"arg1Of","subj":"T4937","obj":"T4942"},{"id":"R4072","pred":"arg1Of","subj":"T4937","obj":"T4943"},{"id":"R4073","pred":"arg1Of","subj":"T4937","obj":"T4956"},{"id":"R4074","pred":"modOf","subj":"T4937","obj":"T4965"},{"id":"R4075","pred":"arg1Of","subj":"T4937","obj":"T4974"},{"id":"R4076","pred":"arg2Of","subj":"T4941","obj":"T4938"},{"id":"R4077","pred":"arg2Of","subj":"T4941","obj":"T4939"},{"id":"R4078","pred":"arg1Of","subj":"T4941","obj":"T4940"},{"id":"R4079","pred":"arg2Of","subj":"T4948","obj":"T4943"},{"id":"R4080","pred":"arg1Of","subj":"T4948","obj":"T4944"},{"id":"R4081","pred":"arg1Of","subj":"T4948","obj":"T4945"},{"id":"R4082","pred":"arg2Of","subj":"T4948","obj":"T4946"},{"id":"R4083","pred":"arg1Of","subj":"T4948","obj":"T4947"},{"id":"R4084","pred":"arg1Of","subj":"T4948","obj":"T4949"},{"id":"R4085","pred":"arg2Of","subj":"T4953","obj":"T4949"},{"id":"R4086","pred":"arg1Of","subj":"T4953","obj":"T4950"},{"id":"R4087","pred":"arg1Of","subj":"T4953","obj":"T4951"},{"id":"R4088","pred":"arg1Of","subj":"T4953","obj":"T4952"},{"id":"R4089","pred":"arg1Of","subj":"T4953","obj":"T4954"},{"id":"R4090","pred":"arg2Of","subj":"T4955","obj":"T4954"},{"id":"R4091","pred":"arg2Of","subj":"T4958","obj":"T4957"},{"id":"R4092","pred":"arg1Of","subj":"T4958","obj":"T4959"},{"id":"R4093","pred":"arg1Of","subj":"T4958","obj":"T4965"},{"id":"R4094","pred":"arg2Of","subj":"T4961","obj":"T4959"},{"id":"R4095","pred":"arg1Of","subj":"T4961","obj":"T4960"},{"id":"R4096","pred":"arg1Of","subj":"T4961","obj":"T4962"},{"id":"R4097","pred":"arg1Of","subj":"T4961","obj":"T4964"},{"id":"R4098","pred":"arg2Of","subj":"T4963","obj":"T4962"},{"id":"R4099","pred":"arg2Of","subj":"T4966","obj":"T4965"},{"id":"R4100","pred":"arg1Of","subj":"T4966","obj":"T4967"},{"id":"R4101","pred":"arg2Of","subj":"T4969","obj":"T4967"},{"id":"R4102","pred":"arg1Of","subj":"T4969","obj":"T4968"},{"id":"R4103","pred":"arg1Of","subj":"T4969","obj":"T4970"},{"id":"R4104","pred":"arg2Of","subj":"T4972","obj":"T4970"},{"id":"R4105","pred":"arg1Of","subj":"T4972","obj":"T4971"},{"id":"R4106","pred":"arg2Of","subj":"T4974","obj":"T4933"},{"id":"R4107","pred":"arg1Of","subj":"T4974","obj":"T4934"},{"id":"R4108","pred":"arg1Of","subj":"T4974","obj":"T4973"},{"id":"R4109","pred":"arg2Of","subj":"T4980","obj":"T4974"},{"id":"R4110","pred":"arg1Of","subj":"T4980","obj":"T4975"},{"id":"R4111","pred":"arg1Of","subj":"T4980","obj":"T4976"},{"id":"R4112","pred":"arg1Of","subj":"T4980","obj":"T4977"},{"id":"R4113","pred":"arg1Of","subj":"T4980","obj":"T4978"},{"id":"R4114","pred":"arg1Of","subj":"T4980","obj":"T4979"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T4503","span":{"begin":0,"end":5},"obj":"EX"},{"id":"T4504","span":{"begin":6,"end":9},"obj":"VBP"},{"id":"T4505","span":{"begin":10,"end":11},"obj":"DT"},{"id":"T4506","span":{"begin":12,"end":18},"obj":"NN"},{"id":"T4507","span":{"begin":19,"end":21},"obj":"IN"},{"id":"T4508","span":{"begin":22,"end":30},"obj":"JJ"},{"id":"T4509","span":{"begin":31,"end":43},"obj":"NNS"},{"id":"T4510","span":{"begin":44,"end":47},"obj":"IN"},{"id":"T4511","span":{"begin":48,"end":51},"obj":"DT"},{"id":"T4512","span":{"begin":52,"end":61},"obj":"JJ"},{"id":"T4513","span":{"begin":62,"end":70},"obj":"NN"},{"id":"T4514","span":{"begin":71,"end":80},"obj":"NN"},{"id":"T4515","span":{"begin":81,"end":83},"obj":"IN"},{"id":"T4516","span":{"begin":84,"end":94},"obj":"VBN"},{"id":"T4517","span":{"begin":95,"end":99},"obj":"NN"},{"id":"T4518","span":{"begin":100,"end":104},"obj":"NNP"},{"id":"T4519","span":{"begin":104,"end":105},"obj":","},{"id":"T4520","span":{"begin":106,"end":115},"obj":"VBG"},{"id":"T4521","span":{"begin":116,"end":117},"obj":"CD"},{"id":"T4522","span":{"begin":117,"end":118},"obj":"-RRB-"},{"id":"T4523","span":{"begin":119,"end":126},"obj":"VBN"},{"id":"T4524","span":{"begin":127,"end":134},"obj":"NN"},{"id":"T4525","span":{"begin":135,"end":145},"obj":"NN"},{"id":"T4526","span":{"begin":146,"end":148},"obj":"IN"},{"id":"T4527","span":{"begin":149,"end":152},"obj":"DT"},{"id":"T4528","span":{"begin":153,"end":156},"obj":"NNP"},{"id":"T4529","span":{"begin":157,"end":165},"obj":"NN"},{"id":"T4530","span":{"begin":166,"end":173},"obj":"NN"},{"id":"T4531","span":{"begin":173,"end":174},"obj":","},{"id":"T4532","span":{"begin":175,"end":176},"obj":"CD"},{"id":"T4533","span":{"begin":176,"end":177},"obj":"-RRB-"},{"id":"T4534","span":{"begin":178,"end":187},"obj":"VBD"},{"id":"T4535","span":{"begin":188,"end":198},"obj":"NN"},{"id":"T4536","span":{"begin":199,"end":201},"obj":"IN"},{"id":"T4537","span":{"begin":202,"end":219},"obj":"JJ"},{"id":"T4538","span":{"begin":220,"end":229},"obj":"NNS"},{"id":"T4539","span":{"begin":229,"end":230},"obj":","},{"id":"T4540","span":{"begin":231,"end":232},"obj":"LS"},{"id":"T4541","span":{"begin":232,"end":233},"obj":"-RRB-"},{"id":"T4542","span":{"begin":234,"end":243},"obj":"VBD"},{"id":"T4543","span":{"begin":244,"end":254},"obj":"NN"},{"id":"T4544","span":{"begin":255,"end":257},"obj":"IN"},{"id":"T4545","span":{"begin":258,"end":266},"obj":"JJ"},{"id":"T4546","span":{"begin":267,"end":277},"obj":"NNS"},{"id":"T4547","span":{"begin":278,"end":280},"obj":"IN"},{"id":"T4548","span":{"begin":281,"end":284},"obj":"NNP"},{"id":"T4549","span":{"begin":285,"end":293},"obj":"NNS"},{"id":"T4550","span":{"begin":293,"end":294},"obj":","},{"id":"T4551","span":{"begin":295,"end":298},"obj":"CC"},{"id":"T4552","span":{"begin":299,"end":300},"obj":"LS"},{"id":"T4553","span":{"begin":300,"end":301},"obj":"-RRB-"},{"id":"T4554","span":{"begin":302,"end":310},"obj":"VBN"},{"id":"T4555","span":{"begin":311,"end":322},"obj":"JJ"},{"id":"T4556","span":{"begin":323,"end":332},"obj":"VBG"},{"id":"T4557","span":{"begin":333,"end":343},"obj":"NN"},{"id":"T4558","span":{"begin":343,"end":344},"obj":"."}],"relations":[{"id":"R3638","pred":"expl","subj":"T4503","obj":"T4504"},{"id":"R3640","pred":"det","subj":"T4505","obj":"T4506"},{"id":"R3641","pred":"attr","subj":"T4506","obj":"T4504"},{"id":"R3642","pred":"prep","subj":"T4507","obj":"T4506"},{"id":"R3643","pred":"amod","subj":"T4508","obj":"T4509"},{"id":"R3644","pred":"pobj","subj":"T4509","obj":"T4507"},{"id":"R3645","pred":"prep","subj":"T4510","obj":"T4509"},{"id":"R3646","pred":"det","subj":"T4511","obj":"T4514"},{"id":"R3647","pred":"amod","subj":"T4512","obj":"T4514"},{"id":"R3648","pred":"compound","subj":"T4513","obj":"T4514"},{"id":"R3649","pred":"pobj","subj":"T4514","obj":"T4510"},{"id":"R3650","pred":"prep","subj":"T4515","obj":"T4514"},{"id":"R3651","pred":"amod","subj":"T4516","obj":"T4518"},{"id":"R3652","pred":"compound","subj":"T4517","obj":"T4518"},{"id":"R3653","pred":"pobj","subj":"T4518","obj":"T4515"},{"id":"R3654","pred":"punct","subj":"T4519","obj":"T4514"},{"id":"R3655","pred":"prep","subj":"T4520","obj":"T4509"},{"id":"R3656","pred":"pobj","subj":"T4521","obj":"T4520"},{"id":"R3657","pred":"punct","subj":"T4522","obj":"T4509"},{"id":"R3658","pred":"amod","subj":"T4523","obj":"T4525"},{"id":"R3659","pred":"compound","subj":"T4524","obj":"T4525"},{"id":"R3660","pred":"conj","subj":"T4525","obj":"T4506"},{"id":"R3661","pred":"prep","subj":"T4526","obj":"T4525"},{"id":"R3662","pred":"det","subj":"T4527","obj":"T4530"},{"id":"R3663","pred":"compound","subj":"T4528","obj":"T4530"},{"id":"R3664","pred":"compound","subj":"T4529","obj":"T4530"},{"id":"R3665","pred":"pobj","subj":"T4530","obj":"T4526"},{"id":"R3666","pred":"punct","subj":"T4531","obj":"T4525"},{"id":"R3667","pred":"appos","subj":"T4532","obj":"T4525"},{"id":"R3668","pred":"punct","subj":"T4533","obj":"T4525"},{"id":"R3669","pred":"amod","subj":"T4534","obj":"T4535"},{"id":"R3670","pred":"ROOT","subj":"T4535","obj":"T4535"},{"id":"R3671","pred":"prep","subj":"T4536","obj":"T4535"},{"id":"R3672","pred":"amod","subj":"T4537","obj":"T4538"},{"id":"R3673","pred":"pobj","subj":"T4538","obj":"T4536"},{"id":"R3674","pred":"punct","subj":"T4539","obj":"T4535"},{"id":"R3675","pred":"meta","subj":"T4540","obj":"T4542"},{"id":"R3676","pred":"punct","subj":"T4541","obj":"T4540"},{"id":"R3677","pred":"amod","subj":"T4542","obj":"T4543"},{"id":"R3678","pred":"appos","subj":"T4543","obj":"T4535"},{"id":"R3679","pred":"prep","subj":"T4544","obj":"T4543"},{"id":"R3680","pred":"amod","subj":"T4545","obj":"T4546"},{"id":"R3681","pred":"pobj","subj":"T4546","obj":"T4544"},{"id":"R3682","pred":"prep","subj":"T4547","obj":"T4546"},{"id":"R3683","pred":"compound","subj":"T4548","obj":"T4549"},{"id":"R3684","pred":"pobj","subj":"T4549","obj":"T4547"},{"id":"R3685","pred":"punct","subj":"T4550","obj":"T4535"},{"id":"R3686","pred":"cc","subj":"T4551","obj":"T4535"},{"id":"R3687","pred":"meta","subj":"T4552","obj":"T4557"},{"id":"R3688","pred":"punct","subj":"T4553","obj":"T4552"},{"id":"R3689","pred":"amod","subj":"T4554","obj":"T4557"},{"id":"R3690","pred":"amod","subj":"T4555","obj":"T4557"},{"id":"R3691","pred":"compound","subj":"T4556","obj":"T4557"},{"id":"R3692","pred":"conj","subj":"T4557","obj":"T4535"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T5380","span":{"begin":323,"end":332},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T5386","span":{"begin":62,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0050663"},{"id":"T5388","span":{"begin":62,"end":94},"obj":"http://purl.obolibrary.org/obo/GO_0050715"},{"id":"T5389","span":{"begin":71,"end":80},"obj":"http://purl.obolibrary.org/obo/GO_0046903"},{"id":"T5394","span":{"begin":71,"end":94},"obj":"http://purl.obolibrary.org/obo/GO_0051047"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T5432","span":{"begin":157,"end":173},"obj":"http://purl.obolibrary.org/obo/GO_0043235"},{"id":"T5434","span":{"begin":157,"end":176},"obj":"http://purl.obolibrary.org/obo/GO_0005893"},{"id":"T5430","span":{"begin":153,"end":173},"obj":"http://purl.obolibrary.org/obo/GO_0046696"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}
sentences
{"project":"sentences","denotations":[{"id":"T4476","span":{"begin":0,"end":344},"obj":"Sentence"},{"id":"T90","span":{"begin":0,"end":344},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T5634","span":{"begin":281,"end":284},"obj":"Protein"},{"id":"T5635","span":{"begin":244,"end":254},"obj":"Gene_expression"},{"id":"T5636","span":{"begin":234,"end":243},"obj":"Positive_regulation"}],"relations":[{"id":"R4543","pred":"themeOf","subj":"T5635","obj":"T5636"},{"id":"R4542","pred":"themeOf","subj":"T5634","obj":"T5635"}],"text":"There are a number of possible explanations for the defective cytokine secretion in stimulated cpdm BMDC, including 1) reduced surface expression of the LPS receptor complex, 2) increased production of anti-inflammatory mediators, 3) increased expression of negative regulators of TLR pathways, and 4) impaired TLR-induced signaling activation."}