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PMC:3245220 / 4692-4921 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3365 17-21 Q09472 denotes p300
T3366 170-174 P25963 denotes IκBα

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3423 158-169 Positive_regulation denotes stabilizing
T3475 17-21 Protein denotes p300
T3476 170-174 Protein denotes IκBα
R2966 T3476 T3423 themeOf IκBα,stabilizing

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4487 17-21 Protein denotes p300
T4488 36-41 Protein denotes NF-κB
T4494 110-113 Protein denotes PKA
T4495 123-128 Protein denotes NF-κB
T4496 206-229 Protein denotes serine/threonine kinase

events-check-again

Id Subject Object Predicate Lexical cue
T4330 17-21 Protein denotes p300
T4331 158-169 Positive_regulation denotes stabilizing
T4332 170-174 Protein denotes IκBα
R3317 T4332 T4331 themeOf IκBα,stabilizing

GO-CC

Id Subject Object Predicate Lexical cue
T3636 110-113 http://purl.obolibrary.org/obo/GO_0005952 denotes PKA

GO-MF

Id Subject Object Predicate Lexical cue
T3591 110-113 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA

GO-BP

Id Subject Object Predicate Lexical cue
T4591 57-70 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4610 114-128 http://purl.obolibrary.org/obo/GO_0032088 denotes inhibits NF-κB
T4612 114-128 http://purl.obolibrary.org/obo/GO_0007252 denotes inhibits NF-κB
T4634 110-113 http://purl.obolibrary.org/obo/GO_0004691 denotes PKA
T4636 139-154 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2743 3-15 NN denotes co-activator
T2744 15-16 -COMMA- denotes ,
T2745 17-21 NN denotes p300
T2746 22-24 TO denotes to
T2747 25-35 VB denotes potentiate
T2748 36-51 JJ denotes NF-κB-regulated
T2749 52-56 NN denotes gene
T2750 57-70 NN denotes transcription
T2751 71-72 -LRB- denotes [
T2752 72-74 CD denotes 21
T2753 74-75 -RRB- denotes ]
T2754 77-84 RB denotes However
T2755 84-85 -COMMA- denotes ,
T2756 86-91 JJ denotes other
T2757 92-99 NN denotes studies
T2758 100-104 VB denotes show
T2759 105-109 IN denotes that
T2760 110-113 NN denotes PKA
T2761 114-122 VB denotes inhibits
T2762 123-138 JJ denotes NF-κB-regulated
T2763 139-143 NN denotes gene
T2764 144-154 NN denotes expression
T2765 155-157 IN denotes by
T2766 158-169 VB denotes stabilizing
T2767 170-174 NNP denotes IκBα
T2768 175-176 -LRB- denotes [
T2769 176-178 CD denotes 22
T2770 178-179 -RRB- denotes ]
T2771 179-180 -COMMA- denotes ,
T2772 181-182 -LRB- denotes [
T2773 182-184 CD denotes 23
T2774 184-185 -RRB- denotes ]
T2775 187-200 RB denotes Interestingly
T2776 200-201 -COMMA- denotes ,
T2777 202-205 DT denotes the
T2778 206-222 NN denotes serine/threonine
T2779 223-229 NN denotes kinase
R2377 T2743 T2744 arg1Of co-activator,","
R2378 T2745 T2744 arg2Of p300,","
R2379 T2745 T2746 modOf p300,to
R2380 T2747 T2746 arg1Of potentiate,to
R2384 T2750 T2747 arg2Of transcription,potentiate
R2385 T2750 T2748 arg1Of transcription,NF-κB-regulated
R2386 T2750 T2749 arg1Of transcription,gene
R2387 T2752 T2751 arg2Of 21,[
R2388 T2753 T2751 arg3Of ],[
R2390 T2757 T2756 arg1Of studies,other
R2391 T2757 T2758 arg1Of studies,show
R2392 T2758 T2754 arg1Of show,However
R2393 T2758 T2755 arg1Of show,","
R2395 T2760 T2761 arg1Of PKA,inhibits
R2396 T2760 T2766 arg1Of PKA,stabilizing
R2397 T2761 T2758 arg2Of inhibits,show
R2398 T2761 T2759 arg1Of inhibits,that
R2399 T2761 T2765 arg1Of inhibits,by
R2401 T2764 T2761 arg2Of expression,inhibits
R2402 T2764 T2762 arg1Of expression,NF-κB-regulated
R2403 T2764 T2763 arg1Of expression,gene
R2405 T2766 T2765 arg2Of stabilizing,by
R2406 T2767 T2766 arg2Of IκBα,stabilizing
R2407 T2767 T2768 arg1Of IκBα,[
R2409 T2767 T2771 arg1Of IκBα,","
R2410 T2767 T2772 arg1Of IκBα,[
R2411 T2769 T2768 arg2Of 22,[
R2413 T2770 T2768 arg3Of ],[
R2416 T2773 T2772 arg2Of 23,[
R2417 T2774 T2772 arg3Of ],[

sentences

Id Subject Object Predicate Lexical cue
T994 77-186 Sentence denotes However, other studies show that PKA inhibits NF-κB-regulated gene expression by stabilizing IκBα [22], [23].
T37 77-186 Sentence denotes However, other studies show that PKA inhibits NF-κB-regulated gene expression by stabilizing IκBα [22], [23].

2_test

Id Subject Object Predicate Lexical cue
22216091-11931769-90609693 72-74 11931769 denotes 21
22216091-7744006-90609694 176-178 7744006 denotes 22

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1599 3-15 NN denotes co-activator
T1600 15-16 , denotes ,
T1601 17-21 CD denotes p300
T1602 22-24 TO denotes to
T1603 25-35 VB denotes potentiate
T1604 36-51 JJ denotes NF-κB-regulated
T1605 52-56 NN denotes gene
T1606 57-70 NN denotes transcription
T1607 71-72 NNP denotes [
T1608 72-74 CD denotes 21
T1609 74-75 NNP denotes ]
T1610 75-76 . denotes .
T1611 77-84 RB denotes However
T1612 84-85 , denotes ,
T1613 86-91 JJ denotes other
T1614 92-99 NNS denotes studies
T1615 100-104 VBP denotes show
T1616 105-109 IN denotes that
T1617 110-113 NNP denotes PKA
T1618 114-122 VBZ denotes inhibits
T1619 123-138 JJ denotes NF-κB-regulated
T1620 139-143 NN denotes gene
T1621 144-154 NN denotes expression
T1622 155-157 IN denotes by
T1623 158-169 VBG denotes stabilizing
T1624 170-174 NNP denotes IκBα
T1625 175-176 NNP denotes [
T1626 176-178 CD denotes 22
T1627 178-179 NNP denotes ]
T1628 179-180 , denotes ,
T1629 181-182 NNP denotes [
T1630 182-184 CD denotes 23
T1631 184-185 NNP denotes ]
T1632 185-186 . denotes .
T1633 187-200 RB denotes Interestingly
T1634 200-201 , denotes ,
T1635 202-205 DT denotes the
T1636 206-222 JJ denotes serine/threonine
T1637 223-229 NN denotes kinase
R1228 T1600 T1599 punct ",",co-activator
R1229 T1601 T1599 appos p300,co-activator
R1230 T1602 T1603 aux to,potentiate
R1232 T1604 T1606 amod NF-κB-regulated,transcription
R1233 T1605 T1606 compound gene,transcription
R1234 T1606 T1603 dobj transcription,potentiate
R1235 T1607 T1609 nmod [,]
R1236 T1608 T1609 nummod 21,]
R1237 T1609 T1609 ROOT ],]
R1239 T1611 T1615 advmod However,show
R1240 T1612 T1615 punct ",",show
R1241 T1613 T1614 amod other,studies
R1242 T1614 T1615 nsubj studies,show
R1243 T1615 T1615 ROOT show,show
R1244 T1616 T1618 mark that,inhibits
R1245 T1617 T1618 nsubj PKA,inhibits
R1246 T1618 T1615 ccomp inhibits,show
R1247 T1619 T1621 amod NF-κB-regulated,expression
R1248 T1620 T1621 compound gene,expression
R1249 T1621 T1618 dobj expression,inhibits
R1250 T1622 T1618 prep by,inhibits
R1251 T1623 T1622 pcomp stabilizing,by
R1252 T1624 T1625 compound IκBα,[
R1253 T1625 T1623 dobj [,stabilizing
R1254 T1626 T1627 nummod 22,]
R1255 T1627 T1623 dobj ],stabilizing
R1256 T1628 T1629 punct ",",[
R1257 T1629 T1627 npadvmod [,]
R1258 T1630 T1631 nummod 23,]
R1259 T1631 T1627 conj ],]
R1260 T1632 T1615 punct .,show