PMC:3245220 / 45799-46183
Annnotations
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21433 | 0-29 | Protein | denotes | Secreted Alkaline Phosphatase |
| T21434 | 31-35 | Protein | denotes | SEAP |
| T21435 | 46-75 | Protein | denotes | Secreted alkaline phosphatase |
| T21436 | 101-121 | Protein | denotes | GreatEscape SEAP kit |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21429 | 18-29 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | Phosphatase |
| T21430 | 64-75 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
| T21431 | 64-84 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase activity |
| T21432 | 55-84 | http://purl.obolibrary.org/obo/GO_0004035 | denotes | alkaline phosphatase activity |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21423 | 18-29 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | Phosphatase |
| T21424 | 64-75 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
| T21425 | 64-84 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase activity |
| T21426 | 55-84 | http://purl.obolibrary.org/obo/GO_0010692 | denotes | alkaline phosphatase activity |
| T21427 | 55-84 | http://purl.obolibrary.org/obo/GO_0004035 | denotes | alkaline phosphatase activity |
| T21428 | 344-350 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signal |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21363 | 0-8 | VB | denotes | Secreted |
| T21364 | 9-17 | NN | denotes | Alkaline |
| T21365 | 18-29 | NN | denotes | Phosphatase |
| T21366 | 30-31 | -LRB- | denotes | ( |
| T21367 | 31-35 | NN | denotes | SEAP |
| T21368 | 35-36 | -RRB- | denotes | ) |
| T21369 | 37-45 | NN | denotes | Analysis |
| T21370 | 46-54 | VB | denotes | Secreted |
| T21371 | 55-63 | NN | denotes | alkaline |
| T21372 | 64-75 | NN | denotes | phosphatase |
| T21373 | 76-84 | NN | denotes | activity |
| T21374 | 85-88 | VB | denotes | was |
| T21375 | 89-97 | VB | denotes | analyzed |
| T21376 | 98-100 | IN | denotes | by |
| T21377 | 101-112 | NNP | denotes | GreatEscape |
| T21378 | 113-117 | NNP | denotes | SEAP |
| T21379 | 118-121 | NN | denotes | kit |
| T21380 | 122-131 | VB | denotes | according |
| T21381 | 132-134 | TO | denotes | to |
| T21382 | 135-138 | DT | denotes | the |
| T21383 | 139-151 | NN | denotes | manufacturer |
| T21384 | 151-153 | POS | denotes | 's |
| T21385 | 154-165 | NN | denotes | instruction |
| T21386 | 167-174 | RB | denotes | Briefly |
| T21387 | 174-175 | -COMMA- | denotes | , |
| T21388 | 176-182 | NN | denotes | medium |
| T21389 | 183-186 | VB | denotes | was |
| T21390 | 187-194 | VB | denotes | diluted |
| T21391 | 195-197 | IN | denotes | in |
| T21392 | 198-201 | DT | denotes | the |
| T21393 | 202-210 | NN | denotes | dilution |
| T21394 | 211-217 | NN | denotes | buffer |
| T21395 | 218-221 | CC | denotes | and |
| T21396 | 222-228 | VB | denotes | heated |
| T21397 | 229-231 | TO | denotes | to |
| T21398 | 232-236 | NN | denotes | 65°C |
| T21399 | 237-239 | TO | denotes | to |
| T21400 | 240-250 | VB | denotes | inactivate |
| T21401 | 251-261 | JJ | denotes | endogenous |
| T21402 | 262-274 | NN | denotes | phosphatases |
| T21403 | 275-279 | RB | denotes | then |
| T21404 | 280-289 | VB | denotes | incubated |
| T21405 | 290-294 | IN | denotes | with |
| T21406 | 295-298 | DT | denotes | the |
| T21407 | 299-308 | NN | denotes | substrate |
| T21408 | 309-312 | IN | denotes | for |
| T21409 | 313-315 | CD | denotes | 30 |
| T21410 | 316-323 | NN | denotes | minutes |
| T21411 | 325-328 | DT | denotes | The |
| T21412 | 329-343 | NN | denotes | chemiluminence |
| T21413 | 344-350 | NN | denotes | signal |
| T21414 | 351-354 | VB | denotes | was |
| T21415 | 355-363 | VB | denotes | recorded |
| T21416 | 364-369 | VB | denotes | using |
| T21417 | 370-371 | DT | denotes | a |
| T21418 | 372-383 | NN | denotes | luminometer |
| R16122 | T21367 | T21366 | arg2Of | SEAP,( |
| R16123 | T21368 | T21366 | arg3Of | ),( |
| R16124 | T21369 | T21365 | arg1Of | Analysis,Phosphatase |
| R16125 | T21369 | T21366 | arg1Of | Analysis,( |
| R16126 | T21369 | T21363 | arg2Of | Analysis,Secreted |
| R16127 | T21369 | T21364 | arg1Of | Analysis,Alkaline |
| R16128 | T21373 | T21370 | arg2Of | activity,Secreted |
| R16129 | T21373 | T21371 | arg1Of | activity,alkaline |
| R16130 | T21373 | T21372 | arg1Of | activity,phosphatase |
| R16131 | T21373 | T21374 | arg1Of | activity,was |
| R16132 | T21373 | T21375 | arg2Of | activity,analyzed |
| R16133 | T21375 | T21374 | arg2Of | analyzed,was |
| R16134 | T21375 | T21380 | arg1Of | analyzed,according |
| R16135 | T21378 | T21377 | arg1Of | SEAP,GreatEscape |
| R16136 | T21379 | T21375 | arg1Of | kit,analyzed |
| R16137 | T21379 | T21376 | arg2Of | kit,by |
| R16138 | T21379 | T21378 | arg1Of | kit,SEAP |
| R16139 | T21381 | T21380 | arg2Of | to,according |
| R16140 | T21383 | T21382 | arg1Of | manufacturer,the |
| R16141 | T21383 | T21384 | arg2Of | manufacturer,'s |
| R16142 | T21385 | T21381 | arg2Of | instruction,to |
| R16143 | T21385 | T21384 | arg1Of | instruction,'s |
| R16144 | T21388 | T21389 | arg1Of | medium,was |
| R16145 | T21388 | T21390 | arg2Of | medium,diluted |
| R16146 | T21388 | T21396 | arg2Of | medium,heated |
| R16147 | T21390 | T21391 | arg1Of | diluted,in |
| R16148 | T21390 | T21395 | arg1Of | diluted,and |
| R16149 | T21394 | T21391 | arg2Of | buffer,in |
| R16150 | T21394 | T21392 | arg1Of | buffer,the |
| R16151 | T21394 | T21393 | arg1Of | buffer,dilution |
| R16152 | T21395 | T21386 | arg1Of | and,Briefly |
| R16153 | T21395 | T21387 | arg1Of | and,"," |
| R16154 | T21395 | T21389 | arg2Of | and,was |
| R16155 | T21396 | T21395 | arg2Of | heated,and |
| R16156 | T21396 | T21397 | arg1Of | heated,to |
| R16157 | T21396 | T21399 | modOf | heated,to |
| R16158 | T21398 | T21397 | arg2Of | 65°C,to |
| R16159 | T21400 | T21399 | arg1Of | inactivate,to |
| R16160 | T21402 | T21400 | arg2Of | phosphatases,inactivate |
| R16161 | T21402 | T21401 | arg1Of | phosphatases,endogenous |
| R16162 | T21402 | T21404 | arg2Of | phosphatases,incubated |
| R16163 | T21404 | T21403 | arg1Of | incubated,then |
| R16164 | T21404 | T21405 | arg1Of | incubated,with |
| R16165 | T21407 | T21405 | arg2Of | substrate,with |
| R16166 | T21407 | T21406 | arg1Of | substrate,the |
| R16167 | T21407 | T21408 | arg1Of | substrate,for |
| R16168 | T21410 | T21408 | arg2Of | minutes,for |
| R16169 | T21410 | T21409 | arg1Of | minutes,30 |
| R16170 | T21413 | T21411 | arg1Of | signal,The |
| R16171 | T21413 | T21412 | arg1Of | signal,chemiluminence |
| R16172 | T21413 | T21414 | arg1Of | signal,was |
| R16173 | T21413 | T21415 | arg2Of | signal,recorded |
| R16174 | T21415 | T21414 | arg2Of | recorded,was |
| R16175 | T21415 | T21416 | modOf | recorded,using |
| R16176 | T21418 | T21416 | arg2Of | luminometer,using |
| R16177 | T21418 | T21417 | arg1Of | luminometer,a |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21298 | 0-45 | Sentence | denotes | Secreted Alkaline Phosphatase (SEAP) Analysis |
| T21299 | 46-166 | Sentence | denotes | Secreted alkaline phosphatase activity was analyzed by GreatEscape SEAP kit according to the manufacturer's instruction. |
| T21300 | 167-324 | Sentence | denotes | Briefly, medium was diluted in the dilution buffer and heated to 65°C to inactivate endogenous phosphatases then incubated with the substrate for 30 minutes. |
| T21301 | 325-384 | Sentence | denotes | The chemiluminence signal was recorded using a luminometer. |
| T319 | 0-45 | Sentence | denotes | Secreted Alkaline Phosphatase (SEAP) Analysis |
| T320 | 46-166 | Sentence | denotes | Secreted alkaline phosphatase activity was analyzed by GreatEscape SEAP kit according to the manufacturer's instruction. |
| T321 | 167-324 | Sentence | denotes | Briefly, medium was diluted in the dilution buffer and heated to 65°C to inactivate endogenous phosphatases then incubated with the substrate for 30 minutes. |
| T322 | 325-384 | Sentence | denotes | The chemiluminence signal was recorded using a luminometer. |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21302 | 0-8 | NNP | denotes | Secreted |
| T21303 | 9-17 | NNP | denotes | Alkaline |
| T21304 | 18-29 | NNP | denotes | Phosphatase |
| T21305 | 30-31 | -LRB- | denotes | ( |
| T21306 | 31-35 | NNP | denotes | SEAP |
| T21307 | 35-36 | -RRB- | denotes | ) |
| T21308 | 37-45 | NNP | denotes | Analysis |
| T21309 | 46-54 | NNP | denotes | Secreted |
| T21310 | 55-63 | NN | denotes | alkaline |
| T21311 | 64-75 | NN | denotes | phosphatase |
| T21312 | 76-84 | NN | denotes | activity |
| T21313 | 85-88 | VBD | denotes | was |
| T21314 | 89-97 | VBN | denotes | analyzed |
| T21315 | 98-100 | IN | denotes | by |
| T21316 | 101-112 | NNP | denotes | GreatEscape |
| T21317 | 113-117 | NNP | denotes | SEAP |
| T21318 | 118-121 | NN | denotes | kit |
| T21319 | 122-131 | VBG | denotes | according |
| T21320 | 132-134 | TO | denotes | to |
| T21321 | 135-138 | DT | denotes | the |
| T21322 | 139-151 | NN | denotes | manufacturer |
| T21323 | 151-153 | POS | denotes | 's |
| T21324 | 154-165 | NN | denotes | instruction |
| T21325 | 165-166 | . | denotes | . |
| T21326 | 167-174 | RB | denotes | Briefly |
| T21327 | 174-175 | , | denotes | , |
| T21328 | 176-182 | NN | denotes | medium |
| T21329 | 183-186 | VBD | denotes | was |
| T21330 | 187-194 | VBN | denotes | diluted |
| T21331 | 195-197 | IN | denotes | in |
| T21332 | 198-201 | DT | denotes | the |
| T21333 | 202-210 | NN | denotes | dilution |
| T21334 | 211-217 | NN | denotes | buffer |
| T21335 | 218-221 | CC | denotes | and |
| T21336 | 222-228 | VBN | denotes | heated |
| T21337 | 229-231 | TO | denotes | to |
| T21338 | 232-234 | CD | denotes | 65 |
| T21339 | 234-235 | CD | denotes | ° |
| T21340 | 235-236 | NNP | denotes | C |
| T21341 | 237-239 | TO | denotes | to |
| T21342 | 240-250 | VB | denotes | inactivate |
| T21343 | 251-261 | JJ | denotes | endogenous |
| T21344 | 262-274 | NNS | denotes | phosphatases |
| T21345 | 275-279 | RB | denotes | then |
| T21346 | 280-289 | VBD | denotes | incubated |
| T21347 | 290-294 | IN | denotes | with |
| T21348 | 295-298 | DT | denotes | the |
| T21349 | 299-308 | NN | denotes | substrate |
| T21350 | 309-312 | IN | denotes | for |
| T21351 | 313-315 | CD | denotes | 30 |
| T21352 | 316-323 | NNS | denotes | minutes |
| T21353 | 323-324 | . | denotes | . |
| T21354 | 325-328 | DT | denotes | The |
| T21355 | 329-343 | NN | denotes | chemiluminence |
| T21356 | 344-350 | NN | denotes | signal |
| T21357 | 351-354 | VBD | denotes | was |
| T21358 | 355-363 | VBN | denotes | recorded |
| T21359 | 364-369 | VBG | denotes | using |
| T21360 | 370-371 | DT | denotes | a |
| T21361 | 372-383 | NN | denotes | luminometer |
| T21362 | 383-384 | . | denotes | . |
| R16061 | T21302 | T21304 | compound | Secreted,Phosphatase |
| R16062 | T21303 | T21304 | compound | Alkaline,Phosphatase |
| R16063 | T21304 | T21314 | nsubjpass | Phosphatase,analyzed |
| R16064 | T21305 | T21306 | punct | (,SEAP |
| R16065 | T21306 | T21304 | appos | SEAP,Phosphatase |
| R16066 | T21307 | T21306 | punct | ),SEAP |
| R16067 | T21308 | T21309 | nsubj | Analysis,Secreted |
| R16068 | T21309 | T21312 | compound | Secreted,activity |
| R16069 | T21310 | T21312 | amod | alkaline,activity |
| R16070 | T21311 | T21312 | compound | phosphatase,activity |
| R16071 | T21312 | T21314 | nsubjpass | activity,analyzed |
| R16072 | T21313 | T21314 | auxpass | was,analyzed |
| R16073 | T21314 | T21314 | ROOT | analyzed,analyzed |
| R16074 | T21315 | T21314 | agent | by,analyzed |
| R16075 | T21316 | T21317 | compound | GreatEscape,SEAP |
| R16076 | T21317 | T21318 | compound | SEAP,kit |
| R16077 | T21318 | T21315 | pobj | kit,by |
| R16078 | T21319 | T21314 | prep | according,analyzed |
| R16079 | T21320 | T21319 | prep | to,according |
| R16080 | T21321 | T21322 | det | the,manufacturer |
| R16081 | T21322 | T21324 | poss | manufacturer,instruction |
| R16082 | T21323 | T21322 | case | 's,manufacturer |
| R16083 | T21324 | T21320 | pobj | instruction,to |
| R16084 | T21325 | T21314 | punct | .,analyzed |
| R16085 | T21326 | T21330 | advmod | Briefly,diluted |
| R16086 | T21327 | T21330 | punct | ",",diluted |
| R16087 | T21328 | T21330 | nsubjpass | medium,diluted |
| R16088 | T21329 | T21330 | auxpass | was,diluted |
| R16089 | T21330 | T21330 | ROOT | diluted,diluted |
| R16090 | T21331 | T21330 | prep | in,diluted |
| R16091 | T21332 | T21334 | det | the,buffer |
| R16092 | T21333 | T21334 | compound | dilution,buffer |
| R16093 | T21334 | T21331 | pobj | buffer,in |
| R16094 | T21335 | T21330 | cc | and,diluted |
| R16095 | T21336 | T21330 | conj | heated,diluted |
| R16096 | T21337 | T21336 | prep | to,heated |
| R16097 | T21338 | T21339 | compound | 65,° |
| R16098 | T21339 | T21340 | nummod | °,C |
| R16099 | T21340 | T21337 | pobj | C,to |
| R16100 | T21341 | T21342 | aux | to,inactivate |
| R16101 | T21342 | T21336 | advcl | inactivate,heated |
| R16102 | T21343 | T21344 | amod | endogenous,phosphatases |
| R16103 | T21344 | T21342 | dobj | phosphatases,inactivate |
| R16104 | T21345 | T21346 | advmod | then,incubated |
| R16105 | T21346 | T21330 | conj | incubated,diluted |
| R16106 | T21347 | T21346 | prep | with,incubated |
| R16107 | T21348 | T21349 | det | the,substrate |
| R16108 | T21349 | T21347 | pobj | substrate,with |
| R16109 | T21350 | T21349 | prep | for,substrate |
| R16110 | T21351 | T21352 | nummod | 30,minutes |
| R16111 | T21352 | T21350 | pobj | minutes,for |
| R16112 | T21353 | T21330 | punct | .,diluted |
| R16113 | T21354 | T21356 | det | The,signal |
| R16114 | T21355 | T21356 | compound | chemiluminence,signal |
| R16115 | T21356 | T21358 | nsubjpass | signal,recorded |
| R16116 | T21357 | T21358 | auxpass | was,recorded |
| R16117 | T21358 | T21358 | ROOT | recorded,recorded |
| R16118 | T21359 | T21358 | advcl | using,recorded |
| R16119 | T21360 | T21361 | det | a,luminometer |
| R16120 | T21361 | T21359 | dobj | luminometer,using |
| R16121 | T21362 | T21358 | punct | .,recorded |