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PMC:3245220 / 22-201 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T441 30-33 Q04206 denotes p65
T442 30-33 P21579 denotes p65
T443 112-148 P09603 denotes Macrophage colony-stimulating factor
T444 123-148 P04141 denotes colony-stimulating factor
T445 150-155 P09603 denotes M-CSF
T446 152-155 P04141 denotes CSF

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T467 34-49 Phosphorylation denotes Phosphorylation
T476 30-33 Protein denotes p65
T477 53-59 Entity denotes Ser276
T483 13-23 Positive_regulation denotes Activating
T484 112-148 Protein denotes Macrophage colony-stimulating factor
T485 150-155 Protein denotes M-CSF
R401 T467 T483 themeOf Phosphorylation,Activating
R405 T477 T467 themeOf Ser276,Phosphorylation
R406 T477 T476 partOf Ser276,p65
R414 T485 T484 equivalentTo M-CSF,Macrophage colony-stimulating factor

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T729 24-29 Protein denotes NF-κB
T730 30-33 Protein denotes p65
T731 64-78 Protein denotes Protein Kinase
T732 34-49 Phosphorylation denotes Phosphorylation
T733 34-49 Phosphorylation denotes Phosphorylation
T734 79-80 Entity denotes C
T735 13-23 Positive_regulation denotes Activating
T736 13-23 Positive_regulation denotes Activating
T737 13-23 Positive_regulation denotes Activating
T738 112-148 Protein denotes Macrophage colony-stimulating factor
T739 150-155 Protein denotes M-CSF
T18342 24-29 Protein denotes NF-κB
R515 T729 T732 themeOf NF-κB,Phosphorylation
R516 T730 T733 themeOf p65,Phosphorylation
R517 T731 T735 themeOf Protein Kinase,Activating
R518 T731 T734 partOf Protein Kinase,C
R519 T732 T736 themeOf Phosphorylation,Activating
R520 T733 T737 themeOf Phosphorylation,Activating
R521 T734 T735 Site C,Activating
R522 T734 T736 Site C,Activating
R523 T734 T737 Site C,Activating

events-check-again

Id Subject Object Predicate Lexical cue
T697 13-23 Positive_regulation denotes Activating
T698 30-33 Protein denotes p65
T699 34-49 Phosphorylation denotes Phosphorylation
T700 53-59 Entity denotes Ser276
T701 112-148 Protein denotes Macrophage colony-stimulating factor
T702 150-155 Protein denotes M-CSF
R497 T699 T697 themeOf Phosphorylation,Activating
R498 T700 T699 themeOf Ser276,Phosphorylation
R499 T700 T698 partOf Ser276,p65
R500 T702 T701 equivalentTo M-CSF,Macrophage colony-stimulating factor

GO-BP

Id Subject Object Predicate Lexical cue
T508 34-49 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T256 1-9 NN denotes Survival
T257 10-12 IN denotes by
T258 13-23 VB denotes Activating
T259 24-29 NN denotes NF-κB
T260 30-33 NN denotes p65
T261 34-49 NN denotes Phosphorylation
T262 50-52 IN denotes at
T263 53-59 NN denotes Ser276
T264 60-63 IN denotes via
T265 64-71 NN denotes Protein
T266 72-78 NN denotes Kinase
T267 79-80 NN denotes C
T268 112-122 NN denotes Macrophage
T269 123-141 JJ denotes colony-stimulating
T270 142-148 NN denotes factor
T271 149-150 -LRB- denotes (
T272 150-155 NN denotes M-CSF
T273 155-156 -RRB- denotes )
T274 157-165 VB denotes promotes
T275 166-177 JJ denotes mononuclear
T15740 24-29 NN denotes NF-κB
R226 T258 T257 arg2Of Activating,by
R227 T258 T262 arg1Of Activating,at
R228 T258 T264 arg1Of Activating,via
R229 T261 T258 arg2Of Phosphorylation,Activating
R230 T261 T259 arg1Of Phosphorylation,NF-κB
R231 T261 T260 arg1Of Phosphorylation,p65
R232 T263 T262 arg2Of Ser276,at
R233 T267 T264 arg2Of C,via
R234 T267 T265 arg1Of C,Protein
R235 T267 T266 arg1Of C,Kinase
R236 T270 T268 arg1Of factor,Macrophage
R237 T270 T269 arg1Of factor,colony-stimulating
R238 T270 T271 arg1Of factor,(
R239 T270 T274 arg1Of factor,promotes
R240 T272 T271 arg2Of M-CSF,(
R241 T273 T271 arg3Of ),(

sentences

Id Subject Object Predicate Lexical cue
T2 103-111 Sentence denotes Abstract

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T61 1-9 NNP denotes Survival
T62 10-12 IN denotes by
T63 13-23 NNP denotes Activating
T64 24-29 NNP denotes NF-κB
T65 30-33 CD denotes p65
T66 34-49 NNP denotes Phosphorylation
T67 50-52 IN denotes at
T68 53-59 NNP denotes Ser276
T69 60-63 IN denotes via
T70 64-71 NNP denotes Protein
T71 72-78 NNP denotes Kinase
T72 79-80 NNP denotes C
T73 112-122 NNP denotes Macrophage
T74 123-141 JJ denotes colony-stimulating
T75 142-148 NN denotes factor
T76 149-150 -LRB- denotes (
T77 150-155 NNP denotes M-CSF
T78 155-156 -RRB- denotes )
T79 157-165 VBZ denotes promotes
T80 166-177 JJ denotes mononuclear
T14519 24-29 JJ denotes NF-κB
R31 T63 T64 compound Activating,NF-κB
R32 T64 T62 pobj NF-κB,by
R33 T65 T66 nummod p65,Phosphorylation
R35 T67 T66 prep at,Phosphorylation
R36 T68 T67 pobj Ser276,at
R38 T70 T71 compound Protein,Kinase
R39 T71 T73 compound Kinase,Macrophage
R40 T72 T73 compound C,Macrophage
R41 T73 T75 nmod Macrophage,factor
R42 T74 T75 amod colony-stimulating,factor
R43 T75 T69 pobj factor,via
R44 T76 T75 punct (,factor
R45 T77 T75 appos M-CSF,factor
R46 T78 T75 punct ),factor
R47 T79 T79 ROOT promotes,promotes

test2

Id Subject Object Predicate Lexical cue
T23 13-23 Positive_regulation denotes Activating
T24 30-33 Protein denotes p65
T25 34-49 Phosphorylation denotes Phosphorylation
T26 53-59 Entity denotes Ser276
T27 112-148 Protein denotes Macrophage colony-stimulating factor
T28 150-155 Protein denotes M-CSF
R14 T25 T23 themeOf Phosphorylation,Activating
R15 T26 T25 themeOf Ser276,Phosphorylation
R16 T26 T24 partOf Ser276,p65
R17 T28 T27 equivalentTo M-CSF,Macrophage colony-stimulating factor