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PMC:3245220 / 21-172 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T441 31-34 Q04206 denotes p65
T442 31-34 P21579 denotes p65
T443 113-149 P09603 denotes Macrophage colony-stimulating factor
T444 124-149 P04141 denotes colony-stimulating factor

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T467 35-50 Phosphorylation denotes Phosphorylation
T476 31-34 Protein denotes p65
T477 54-60 Entity denotes Ser276
T483 14-24 Positive_regulation denotes Activating
T484 113-149 Protein denotes Macrophage colony-stimulating factor
R401 T467 T483 themeOf Phosphorylation,Activating
R405 T477 T467 themeOf Ser276,Phosphorylation
R406 T477 T476 partOf Ser276,p65

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T729 25-30 Protein denotes NF-κB
T730 31-34 Protein denotes p65
T731 65-79 Protein denotes Protein Kinase
T732 35-50 Phosphorylation denotes Phosphorylation
T733 35-50 Phosphorylation denotes Phosphorylation
T734 80-81 Entity denotes C
T735 14-24 Positive_regulation denotes Activating
T736 14-24 Positive_regulation denotes Activating
T737 14-24 Positive_regulation denotes Activating
T738 113-149 Protein denotes Macrophage colony-stimulating factor
T18342 25-30 Protein denotes NF-κB
R515 T729 T732 themeOf NF-κB,Phosphorylation
R516 T730 T733 themeOf p65,Phosphorylation
R517 T731 T735 themeOf Protein Kinase,Activating
R518 T731 T734 partOf Protein Kinase,C
R519 T732 T736 themeOf Phosphorylation,Activating
R520 T733 T737 themeOf Phosphorylation,Activating
R521 T734 T735 Site C,Activating
R522 T734 T736 Site C,Activating
R523 T734 T737 Site C,Activating

events-check-again

Id Subject Object Predicate Lexical cue
T697 14-24 Positive_regulation denotes Activating
T698 31-34 Protein denotes p65
T699 35-50 Phosphorylation denotes Phosphorylation
T700 54-60 Entity denotes Ser276
T701 113-149 Protein denotes Macrophage colony-stimulating factor
R497 T699 T697 themeOf Phosphorylation,Activating
R498 T700 T699 themeOf Ser276,Phosphorylation
R499 T700 T698 partOf Ser276,p65

GO-BP

Id Subject Object Predicate Lexical cue
T508 35-50 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T256 2-10 NN denotes Survival
T257 11-13 IN denotes by
T258 14-24 VB denotes Activating
T259 25-30 NN denotes NF-κB
T260 31-34 NN denotes p65
T261 35-50 NN denotes Phosphorylation
T262 51-53 IN denotes at
T263 54-60 NN denotes Ser276
T264 61-64 IN denotes via
T265 65-72 NN denotes Protein
T266 73-79 NN denotes Kinase
T267 80-81 NN denotes C
T268 113-123 NN denotes Macrophage
T269 124-142 JJ denotes colony-stimulating
T270 143-149 NN denotes factor
T271 150-151 -LRB- denotes (
T15740 25-30 NN denotes NF-κB
R226 T258 T257 arg2Of Activating,by
R227 T258 T262 arg1Of Activating,at
R228 T258 T264 arg1Of Activating,via
R229 T261 T258 arg2Of Phosphorylation,Activating
R230 T261 T259 arg1Of Phosphorylation,NF-κB
R231 T261 T260 arg1Of Phosphorylation,p65
R232 T263 T262 arg2Of Ser276,at
R233 T267 T264 arg2Of C,via
R234 T267 T265 arg1Of C,Protein
R235 T267 T266 arg1Of C,Kinase
R236 T270 T268 arg1Of factor,Macrophage
R237 T270 T269 arg1Of factor,colony-stimulating
R238 T270 T271 arg1Of factor,(

sentences

Id Subject Object Predicate Lexical cue
T2 104-112 Sentence denotes Abstract

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T61 2-10 NNP denotes Survival
T62 11-13 IN denotes by
T63 14-24 NNP denotes Activating
T64 25-30 NNP denotes NF-κB
T65 31-34 CD denotes p65
T66 35-50 NNP denotes Phosphorylation
T67 51-53 IN denotes at
T68 54-60 NNP denotes Ser276
T69 61-64 IN denotes via
T70 65-72 NNP denotes Protein
T71 73-79 NNP denotes Kinase
T72 80-81 NNP denotes C
T73 113-123 NNP denotes Macrophage
T74 124-142 JJ denotes colony-stimulating
T75 143-149 NN denotes factor
T76 150-151 -LRB- denotes (
T14519 25-30 JJ denotes NF-κB
R31 T63 T64 compound Activating,NF-κB
R32 T64 T62 pobj NF-κB,by
R33 T65 T66 nummod p65,Phosphorylation
R35 T67 T66 prep at,Phosphorylation
R36 T68 T67 pobj Ser276,at
R38 T70 T71 compound Protein,Kinase
R39 T71 T73 compound Kinase,Macrophage
R40 T72 T73 compound C,Macrophage
R41 T73 T75 nmod Macrophage,factor
R42 T74 T75 amod colony-stimulating,factor
R43 T75 T69 pobj factor,via
R44 T76 T75 punct (,factor

test2

Id Subject Object Predicate Lexical cue
T23 14-24 Positive_regulation denotes Activating
T24 31-34 Protein denotes p65
T25 35-50 Phosphorylation denotes Phosphorylation
T26 54-60 Entity denotes Ser276
T27 113-149 Protein denotes Macrophage colony-stimulating factor
R14 T25 T23 themeOf Phosphorylation,Activating
R15 T26 T25 themeOf Ser276,Phosphorylation
R16 T26 T24 partOf Ser276,p65