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PMC:3245220 / 18292-19576 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T24908 44-49 P09603 denotes M-CSF
T24909 46-49 P04141 denotes CSF
T24910 89-93 P25963 denotes IκBα
T24911 149-152 P21579 denotes p65
T24912 149-152 Q04206 denotes p65
T24913 279-284 P09603 denotes M-CSF
T24914 281-284 P04141 denotes CSF
T24915 386-390 P25963 denotes IκBα
T24916 556-561 P09603 denotes M-CSF
T24917 558-561 P04141 denotes CSF
T24918 669-672 P21579 denotes p65
T24919 669-672 Q04206 denotes p65
T24920 747-750 P21579 denotes p65
T24921 747-750 Q04206 denotes p65
T24922 867-872 P09603 denotes M-CSF
T24923 869-872 P04141 denotes CSF
T24924 957-960 Q04206 denotes p65
T24925 957-960 P21579 denotes p65
T24926 1183-1188 P04406 denotes GAPDH

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation Speculation
T24927 80-88 Regulation denotes regulate true
T24928 94-105 Protein_catabolism denotes degradation
T24929 110-119 Regulation denotes regulates
T24930 124-139 Phosphorylation denotes phosphorylation
T24931 627-634 Phosphorylation denotes phospho true
T24932 645-652 Phosphorylation denotes phospho true
T24933 89-93 Protein denotes IκBα
T24934 635-641 Entity denotes Ser276
T24935 653-659 Entity denotes Ser536
T24936 149-152 Protein denotes p65
T24937 669-672 Protein denotes p65
T24938 747-750 Protein denotes p65
T24939 156-162 Entity denotes Ser276
T24940 44-49 Protein denotes M-CSF
T24941 279-284 Protein denotes M-CSF
T24942 556-561 Protein denotes M-CSF
T24943 867-872 Protein denotes M-CSF
T24944 844-851 Negative_regulation denotes absence
T24945 855-863 Positive_regulation denotes presence
R19084 T24928 T24927 themeOf degradation,regulate
R19085 T24930 T24929 themeOf phosphorylation,regulates
R19086 T24933 T24928 themeOf IκBα,degradation
R19087 T24934 T24931 themeOf Ser276,phospho
R19088 T24934 T24937 partOf Ser276,p65
R19089 T24935 T24932 themeOf Ser536,phospho
R19090 T24935 T24937 partOf Ser536,p65
R19091 T24939 T24930 themeOf Ser276,phosphorylation
R19092 T24939 T24936 partOf Ser276,p65
R19093 T24940 T24927 causeOf M-CSF,regulate
R19094 T24940 T24929 causeOf M-CSF,regulates
R19095 T24943 T24945 themeOf M-CSF,presence
R19096 T24943 T24944 themeOf M-CSF,absence

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T25079 44-49 Protein denotes M-CSF
T25080 58-61 Protein denotes PKC
T25081 89-109 Protein denotes IκBα degradation but
T25082 143-152 Protein denotes NF-κB p65
T25083 50-57 Positive_regulation denotes induced
T25084 80-88 Regulation denotes regulate
T25085 110-119 Regulation denotes regulates
T25086 124-139 Phosphorylation denotes phosphorylation
T25087 279-284 Protein denotes M-CSF
T25088 381-399 Protein denotes anti-IκBα antibody
T25089 556-561 Protein denotes M-CSF
T25090 663-672 Protein denotes NF-κB p65
T25091 741-750 Protein denotes NF-κB p65
T25092 867-872 Protein denotes M-CSF
T25093 951-971 Protein denotes NF-κB p65 antibodies
T25094 1081-1094 Protein denotes phospho-NF-κB
T25095 1183-1188 Protein denotes GAPDH
T25096 1193-1200 Protein denotes Lamin B
R19165 T25079 T25083 causeOf M-CSF,induced
R19166 T25080 T25083 themeOf PKC,induced
R19167 T25081 T25084 themeOf IκBα degradation but,regulate
R19168 T25082 T25086 themeOf NF-κB p65,phosphorylation
R19169 T25083 T25085 themeOf induced,regulates

events-check-again

Id Subject Object Predicate Lexical cue Negation Speculation
T25060 44-49 Protein denotes M-CSF
T25061 80-88 Regulation denotes regulate true
T25062 89-93 Protein denotes IκBα
T25063 94-105 Protein_catabolism denotes degradation
T25064 110-119 Regulation denotes regulates
T25065 124-139 Phosphorylation denotes phosphorylation
T25066 149-152 Protein denotes p65
T25067 156-162 Entity denotes Ser276
T25068 279-284 Protein denotes M-CSF
T25069 556-561 Protein denotes M-CSF
T25070 627-634 Phosphorylation denotes phospho true
T25071 635-641 Entity denotes Ser276
T25072 645-652 Phosphorylation denotes phospho true
T25073 653-659 Entity denotes Ser536
T25074 669-672 Protein denotes p65
T25075 747-750 Protein denotes p65
T25076 844-851 Negative_regulation denotes absence
T25077 855-863 Positive_regulation denotes presence
T25078 867-872 Protein denotes M-CSF
R19152 T25060 T25061 causeOf M-CSF,regulate
R19153 T25060 T25064 causeOf M-CSF,regulates
R19154 T25062 T25063 themeOf IκBα,degradation
R19155 T25063 T25061 themeOf degradation,regulate
R19156 T25065 T25064 themeOf phosphorylation,regulates
R19157 T25067 T25065 themeOf Ser276,phosphorylation
R19158 T25067 T25066 partOf Ser276,p65
R19159 T25071 T25070 themeOf Ser276,phospho
R19160 T25071 T25074 partOf Ser276,p65
R19161 T25073 T25072 themeOf Ser536,phospho
R19162 T25073 T25074 partOf Ser536,p65
R19163 T25078 T25077 themeOf M-CSF,presence
R19164 T25078 T25076 themeOf M-CSF,absence

GO-CC

Id Subject Object Predicate Lexical cue
T24957 328-332 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T24958 584-588 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T24959 762-766 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T24960 788-793 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T24961 1053-1058 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T24962 391-399 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T24963 709-719 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T24964 961-971 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T24965 391-399 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T24966 709-719 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T24967 961-971 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies

GO-MF

Id Subject Object Predicate Lexical cue
T24953 58-70 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC activity
T24954 391-399 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T24955 709-719 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T24956 961-971 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-BP

Id Subject Object Predicate Lexical cue
T25097 94-105 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T25098 124-139 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T24714 44-57 JJ denotes M-CSF-induced
T24715 58-61 NN denotes PKC
T24716 62-70 NN denotes activity
T24717 71-75 VB denotes does
T24718 76-79 RB denotes not
T24719 80-88 VB denotes regulate
T24720 89-93 NN denotes IκBα
T24721 94-105 NN denotes degradation
T24722 106-109 CC denotes but
T24723 110-119 VB denotes regulates
T24724 120-123 DT denotes the
T24725 124-139 NN denotes phosphorylation
T24726 140-142 IN denotes of
T24727 143-148 NN denotes NF-κB
T24728 149-152 NN denotes p65
T24729 153-155 IN denotes at
T24730 156-162 NN denotes Ser276
T24731 164-165 -LRB- denotes (
T24732 165-166 NN denotes A
T24733 166-167 -RRB- denotes )
T24734 168-172 NN denotes MDMs
T24735 173-177 VB denotes were
T24736 178-188 VB denotes pretreated
T24737 189-193 IN denotes with
T24738 194-207 NN denotes cycloheximide
T24739 208-209 -LRB- denotes (
T24740 209-212 NN denotes CHX
T24741 212-213 -RRB- denotes )
T24742 214-216 IN denotes in
T24743 217-220 DT denotes the
T24744 221-228 NN denotes absence
T24745 229-231 CC denotes or
T24746 232-240 NN denotes presence
T24747 241-243 IN denotes of
T24748 244-254 NN denotes Ro-31-8220
T24749 255-258 IN denotes for
T24750 259-261 CD denotes 30
T24751 262-269 NN denotes minutes
T24752 270-275 RB denotes prior
T24753 276-278 TO denotes to
T24754 279-284 NN denotes M-CSF
T24755 285-296 NN denotes stimulation
T24756 297-300 IN denotes for
T24757 301-304 DT denotes the
T24758 305-314 JJ denotes indicated
T24759 315-320 NN denotes times
T24760 322-327 JJ denotes Whole
T24761 328-332 NN denotes cell
T24762 333-340 NN denotes lysates
T24763 341-345 VB denotes were
T24764 346-355 VB denotes subjected
T24765 356-358 TO denotes to
T24766 359-366 JJ denotes Western
T24767 367-375 NN denotes blotting
T24768 376-380 IN denotes with
T24769 381-390 JJ denotes anti-IκBα
T24770 391-399 NN denotes antibody
T24771 401-405 NN denotes Data
T24772 406-409 VB denotes are
T24773 410-424 JJ denotes representative
T24774 425-427 IN denotes of
T24775 428-433 CD denotes three
T24776 434-445 JJ denotes independent
T24777 446-458 NN denotes experiments.
T24778 459-460 -LRB- denotes (
T24779 460-461 NN denotes B
T24780 461-462 -RRB- denotes )
T24781 463-467 NN denotes MDMs
T24782 468-472 VB denotes were
T24783 473-483 VB denotes pretreated
T24784 484-488 IN denotes with
T24785 489-495 CC denotes either
T24786 496-503 NN denotes vehicle
T24787 504-506 CC denotes or
T24788 507-517 NN denotes Ro-31-8220
T24789 518-521 IN denotes for
T24790 522-524 CD denotes 30
T24791 525-532 NN denotes minutes
T24792 533-539 IN denotes before
T24793 540-543 DT denotes the
T24794 544-552 NN denotes addition
T24795 553-555 IN denotes of
T24796 556-561 NN denotes M-CSF
T24797 562-565 IN denotes for
T24798 566-568 CD denotes 10
T24799 569-576 NN denotes minutes
T24800 578-583 JJ denotes Whole
T24801 584-588 NN denotes cell
T24802 589-596 NN denotes lysates
T24803 597-601 VB denotes were
T24804 602-610 VB denotes resolved
T24805 611-613 IN denotes by
T24806 614-622 NN denotes SDS-PAGE
T24807 623-626 CC denotes and
T24808 627-641 NN denotes phospho-Ser276
T24809 642-644 CC denotes or
T24810 645-659 NN denotes phospho-Ser536
T24811 660-662 IN denotes of
T24812 663-668 NN denotes NF-κB
T24813 669-672 NN denotes p65
T24814 673-676 VB denotes was
T24815 677-685 VB denotes detected
T24816 686-691 VB denotes using
T24817 692-708 JJ denotes phospho-specific
T24818 709-719 NN denotes antibodies
T24819 720-722 TO denotes to
T24820 723-729 CC denotes either
T24821 730-737 NN denotes residue
T24822 738-740 IN denotes of
T24823 741-746 NN denotes NF-κB
T24824 747-751 NN denotes p65.
T24825 752-753 -LRB- denotes (
T24826 753-754 NN denotes C
T24827 754-755 -RRB- denotes )
T24828 756-761 JJ denotes Whole
T24829 762-766 NN denotes cell
T24830 767-774 NN denotes lysates
T24831 775-777 IN denotes of
T24832 778-781 NN denotes RAW
T24833 782-787 CD denotes 264.7
T24834 788-793 NN denotes cells
T24835 794-801 VB denotes treated
T24836 802-806 IN denotes with
T24837 807-814 NN denotes vehicle
T24838 815-822 NN denotes control
T24839 823-825 CC denotes or
T24840 826-836 NN denotes Ro-31-8220
T24841 837-839 IN denotes in
T24842 840-843 DT denotes the
T24843 844-851 NN denotes absence
T24844 852-854 CC denotes or
T24845 855-863 NN denotes presence
T24846 864-866 IN denotes of
T24847 867-872 NN denotes M-CSF
T24848 873-877 VB denotes were
T24849 878-887 VB denotes subjected
T24850 888-890 TO denotes to
T24851 891-898 JJ denotes Western
T24852 899-903 NN denotes blot
T24853 904-912 NN denotes analysis
T24854 913-917 IN denotes with
T24855 918-932 NN denotes phospho-Ser276
T24856 933-935 CC denotes or
T24857 936-950 NN denotes phospho-Ser536
T24858 951-956 NN denotes NF-κB
T24859 957-960 NN denotes p65
T24860 961-972 NN denotes antibodies.
T24861 973-974 -LRB- denotes (
T24862 974-975 NN denotes D
T24863 975-976 -RRB- denotes )
T24864 977-986 JJ denotes Cytosolic
T24865 987-990 CC denotes and
T24866 991-998 JJ denotes nuclear
T24867 999-1008 NN denotes fractions
T24868 1009-1011 IN denotes of
T24869 1012-1015 NN denotes RAW
T24870 1016-1021 CD denotes 264.7
T24871 1022-1026 VB denotes were
T24872 1027-1035 VB denotes obtained
T24873 1036-1040 IN denotes from
T24874 1041-1044 DT denotes the
T24875 1045-1052 VB denotes treated
T24876 1053-1058 NN denotes cells
T24877 1059-1062 CC denotes and
T24878 1063-1076 VB denotes immunoblotted
T24879 1077-1080 IN denotes for
T24880 1081-1094 NN denotes phospho-NF-κB
T24881 1096-1099 DT denotes The
T24882 1100-1106 NN denotes purity
T24883 1107-1109 IN denotes of
T24884 1110-1113 DT denotes the
T24885 1114-1123 JJ denotes cytosolic
T24886 1124-1127 CC denotes and
T24887 1128-1135 JJ denotes nuclear
T24888 1136-1145 NN denotes fractions
T24889 1146-1149 VB denotes was
T24890 1150-1159 VB denotes confirmed
T24891 1160-1162 IN denotes by
T24892 1163-1177 VB denotes immunoblotting
T24893 1178-1182 IN denotes with
T24894 1183-1188 NN denotes GAPDH
T24895 1189-1192 CC denotes and
T24896 1193-1198 NN denotes Lamin
T24897 1199-1200 NN denotes B
T24898 1200-1201 -COMMA- denotes ,
T24899 1202-1214 RB denotes respectively
T24900 1216-1221 VB denotes Shown
T24901 1222-1225 VB denotes are
T24902 1226-1240 JJ denotes representative
T24903 1241-1246 NN denotes blots
T24904 1247-1251 IN denotes from
T24905 1252-1257 CD denotes three
T24906 1258-1269 JJ denotes independent
T24907 1270-1281 NN denotes experiments
R18880 T24716 T24714 arg1Of activity,M-CSF-induced
R18881 T24716 T24715 arg1Of activity,PKC
R18882 T24716 T24717 arg1Of activity,does
R18883 T24716 T24719 arg1Of activity,regulate
R18884 T24716 T24723 arg1Of activity,regulates
R18885 T24719 T24717 arg2Of regulate,does
R18886 T24719 T24718 arg1Of regulate,not
R18887 T24719 T24722 arg1Of regulate,but
R18888 T24721 T24719 arg2Of degradation,regulate
R18889 T24721 T24720 arg1Of degradation,IκBα
R18890 T24723 T24722 arg2Of regulates,but
R18891 T24725 T24723 arg2Of phosphorylation,regulates
R18892 T24725 T24724 arg1Of phosphorylation,the
R18893 T24725 T24726 arg1Of phosphorylation,of
R18894 T24728 T24726 arg2Of p65,of
R18895 T24728 T24727 arg1Of p65,NF-κB
R18896 T24728 T24729 arg1Of p65,at
R18897 T24730 T24729 arg2Of Ser276,at
R18898 T24732 T24731 arg2Of A,(
R18899 T24733 T24731 arg3Of ),(
R18900 T24734 T24731 arg1Of MDMs,(
R18901 T24734 T24735 arg1Of MDMs,were
R18902 T24734 T24736 arg2Of MDMs,pretreated
R18903 T24736 T24735 arg2Of pretreated,were
R18904 T24736 T24737 arg1Of pretreated,with
R18905 T24736 T24742 arg1Of pretreated,in
R18906 T24736 T24749 arg1Of pretreated,for
R18907 T24738 T24737 arg2Of cycloheximide,with
R18908 T24738 T24739 arg1Of cycloheximide,(
R18909 T24740 T24739 arg2Of CHX,(
R18910 T24741 T24739 arg3Of ),(
R18911 T24744 T24745 arg1Of absence,or
R18912 T24745 T24742 arg2Of or,in
R18913 T24745 T24743 arg1Of or,the
R18914 T24745 T24747 arg1Of or,of
R18915 T24746 T24745 arg2Of presence,or
R18916 T24748 T24747 arg2Of Ro-31-8220,of
R18917 T24751 T24749 arg2Of minutes,for
R18918 T24751 T24750 arg1Of minutes,30
R18919 T24751 T24753 arg1Of minutes,to
R18920 T24753 T24752 arg1Of to,prior
R18921 T24755 T24753 arg2Of stimulation,to
R18922 T24755 T24754 arg1Of stimulation,M-CSF
R18923 T24755 T24756 arg1Of stimulation,for
R18924 T24759 T24756 arg2Of times,for
R18925 T24759 T24757 arg1Of times,the
R18926 T24759 T24758 arg1Of times,indicated
R18927 T24762 T24760 arg1Of lysates,Whole
R18928 T24762 T24761 arg1Of lysates,cell
R18929 T24762 T24763 arg1Of lysates,were
R18930 T24762 T24764 arg2Of lysates,subjected
R18931 T24764 T24763 arg2Of subjected,were
R18932 T24764 T24765 arg1Of subjected,to
R18933 T24767 T24765 arg2Of blotting,to
R18934 T24767 T24766 arg1Of blotting,Western
R18935 T24767 T24768 arg1Of blotting,with
R18936 T24770 T24768 arg2Of antibody,with
R18937 T24770 T24769 arg1Of antibody,anti-IκBα
R18938 T24771 T24772 arg1Of Data,are
R18939 T24771 T24773 arg1Of Data,representative
R18940 T24773 T24772 arg2Of representative,are
R18941 T24773 T24774 arg1Of representative,of
R18942 T24777 T24774 arg2Of experiments.,of
R18943 T24777 T24775 arg1Of experiments.,three
R18944 T24777 T24776 arg1Of experiments.,independent
R18945 T24777 T24778 arg1Of experiments.,(
R18946 T24779 T24778 arg2Of B,(
R18947 T24780 T24778 arg3Of ),(
R18948 T24781 T24782 arg1Of MDMs,were
R18949 T24781 T24783 arg2Of MDMs,pretreated
R18950 T24783 T24773 arg2Of pretreated,representative
R18951 T24783 T24782 arg2Of pretreated,were
R18952 T24783 T24784 arg1Of pretreated,with
R18953 T24786 T24787 arg1Of vehicle,or
R18954 T24787 T24784 arg2Of or,with
R18955 T24787 T24785 arg1Of or,either
R18956 T24787 T24789 arg1Of or,for
R18957 T24788 T24787 arg2Of Ro-31-8220,or
R18958 T24791 T24789 arg2Of minutes,for
R18959 T24791 T24790 arg1Of minutes,30
R18960 T24791 T24792 arg1Of minutes,before
R18961 T24794 T24792 arg2Of addition,before
R18962 T24794 T24793 arg1Of addition,the
R18963 T24794 T24795 arg1Of addition,of
R18964 T24794 T24797 arg1Of addition,for
R18965 T24796 T24795 arg2Of M-CSF,of
R18966 T24799 T24797 arg2Of minutes,for
R18967 T24799 T24798 arg1Of minutes,10
R18968 T24802 T24800 arg1Of lysates,Whole
R18969 T24802 T24801 arg1Of lysates,cell
R18970 T24802 T24803 arg1Of lysates,were
R18971 T24802 T24804 arg2Of lysates,resolved
R18972 T24802 T24848 arg1Of lysates,were
R18973 T24802 T24849 arg2Of lysates,subjected
R18974 T24804 T24803 arg2Of resolved,were
R18975 T24804 T24805 arg1Of resolved,by
R18976 T24804 T24807 arg1Of resolved,and
R18977 T24806 T24805 arg2Of SDS-PAGE,by
R18978 T24808 T24809 arg1Of phospho-Ser276,or
R18979 T24809 T24811 arg1Of or,of
R18980 T24809 T24814 arg1Of or,was
R18981 T24809 T24815 arg2Of or,detected
R18982 T24809 T24816 arg1Of or,using
R18983 T24810 T24809 arg2Of phospho-Ser536,or
R18984 T24813 T24811 arg2Of p65,of
R18985 T24813 T24812 arg1Of p65,NF-κB
R18986 T24815 T24814 arg2Of detected,was
R18987 T24816 T24815 arg3Of using,detected
R18988 T24818 T24816 arg2Of antibodies,using
R18989 T24818 T24817 arg1Of antibodies,phospho-specific
R18990 T24818 T24819 arg1Of antibodies,to
R18991 T24821 T24819 arg2Of residue,to
R18992 T24821 T24820 arg1Of residue,either
R18993 T24821 T24822 arg1Of residue,of
R18994 T24826 T24825 arg2Of C,(
R18995 T24827 T24825 arg3Of ),(
R18996 T24830 T24822 arg2Of lysates,of
R18997 T24830 T24823 arg1Of lysates,NF-κB
R18998 T24830 T24824 arg1Of lysates,p65.
R18999 T24830 T24825 arg1Of lysates,(
R19000 T24830 T24828 arg1Of lysates,Whole
R19001 T24830 T24829 arg1Of lysates,cell
R19002 T24830 T24831 arg1Of lysates,of
R19003 T24834 T24831 arg2Of cells,of
R19004 T24834 T24832 arg1Of cells,RAW
R19005 T24834 T24833 arg1Of cells,264.7
R19006 T24834 T24835 arg2Of cells,treated
R19007 T24835 T24836 arg1Of treated,with
R19008 T24835 T24841 arg1Of treated,in
R19009 T24838 T24839 arg1Of control,or
R19010 T24839 T24836 arg2Of or,with
R19011 T24839 T24837 arg1Of or,vehicle
R19012 T24840 T24839 arg2Of Ro-31-8220,or
R19013 T24843 T24844 arg1Of absence,or
R19014 T24844 T24841 arg2Of or,in
R19015 T24844 T24842 arg1Of or,the
R19016 T24844 T24846 arg1Of or,of
R19017 T24845 T24844 arg2Of presence,or
R19018 T24847 T24846 arg2Of M-CSF,of
R19019 T24849 T24807 arg2Of subjected,and
R19020 T24849 T24814 modOf subjected,was
R19021 T24849 T24848 arg2Of subjected,were
R19022 T24849 T24850 arg1Of subjected,to
R19023 T24853 T24851 arg1Of analysis,Western
R19024 T24853 T24852 arg1Of analysis,blot
R19025 T24853 T24854 arg1Of analysis,with
R19026 T24853 T24856 arg1Of analysis,or
R19027 T24855 T24854 arg2Of phospho-Ser276,with
R19028 T24856 T24850 arg2Of or,to
R19029 T24856 T24871 modOf or,were
R19030 T24860 T24856 arg2Of antibodies.,or
R19031 T24860 T24857 arg1Of antibodies.,phospho-Ser536
R19032 T24860 T24858 arg1Of antibodies.,NF-κB
R19033 T24860 T24859 arg1Of antibodies.,p65
R19034 T24860 T24861 arg1Of antibodies.,(
R19035 T24862 T24861 arg2Of D,(
R19036 T24863 T24861 arg3Of ),(
R19037 T24864 T24865 arg1Of Cytosolic,and
R19038 T24866 T24865 arg2Of nuclear,and
R19039 T24867 T24864 arg1Of fractions,Cytosolic
R19040 T24867 T24866 arg1Of fractions,nuclear
R19041 T24867 T24868 arg1Of fractions,of
R19042 T24867 T24871 arg1Of fractions,were
R19043 T24867 T24872 arg2Of fractions,obtained
R19044 T24867 T24878 arg2Of fractions,immunoblotted
R19045 T24869 T24868 arg2Of RAW,of
R19046 T24869 T24870 arg1Of RAW,264.7
R19047 T24872 T24873 arg1Of obtained,from
R19048 T24872 T24877 arg1Of obtained,and
R19049 T24876 T24873 arg2Of cells,from
R19050 T24876 T24874 arg1Of cells,the
R19051 T24876 T24875 arg2Of cells,treated
R19052 T24877 T24871 arg2Of and,were
R19053 T24878 T24877 arg2Of immunoblotted,and
R19054 T24878 T24879 arg1Of immunoblotted,for
R19055 T24880 T24879 arg2Of phospho-NF-κB,for
R19056 T24882 T24881 arg1Of purity,The
R19057 T24882 T24883 arg1Of purity,of
R19058 T24882 T24889 arg1Of purity,was
R19059 T24882 T24890 arg2Of purity,confirmed
R19060 T24885 T24886 arg1Of cytosolic,and
R19061 T24887 T24886 arg2Of nuclear,and
R19062 T24888 T24883 arg2Of fractions,of
R19063 T24888 T24884 arg1Of fractions,the
R19064 T24888 T24885 arg1Of fractions,cytosolic
R19065 T24888 T24887 arg1Of fractions,nuclear
R19066 T24890 T24889 arg2Of confirmed,was
R19067 T24890 T24891 arg1Of confirmed,by
R19068 T24890 T24898 arg1Of confirmed,","
R19069 T24890 T24899 arg1Of confirmed,respectively
R19070 T24892 T24891 arg2Of immunoblotting,by
R19071 T24892 T24893 arg1Of immunoblotting,with
R19072 T24894 T24895 arg1Of GAPDH,and
R19073 T24895 T24893 arg2Of and,with
R19074 T24897 T24895 arg2Of B,and
R19075 T24897 T24896 arg1Of B,Lamin
R19076 T24901 T24900 modOf are,Shown
R19077 T24903 T24900 arg2Of blots,Shown
R19078 T24903 T24901 arg1Of blots,are
R19079 T24903 T24902 arg1Of blots,representative
R19080 T24903 T24904 arg1Of blots,from
R19081 T24907 T24904 arg2Of experiments,from
R19082 T24907 T24905 arg1Of experiments,three
R19083 T24907 T24906 arg1Of experiments,independent

sentences

Id Subject Object Predicate Lexical cue
T24503 44-163 Sentence denotes M-CSF-induced PKC activity does not regulate IκBα degradation but regulates the phosphorylation of NF-κB p65 at Ser276.
T24504 164-321 Sentence denotes (A) MDMs were pretreated with cycloheximide (CHX) in the absence or presence of Ro-31-8220 for 30 minutes prior to M-CSF stimulation for the indicated times.
T24505 322-400 Sentence denotes Whole cell lysates were subjected to Western blotting with anti-IκBα antibody.
T24506 401-577 Sentence denotes Data are representative of three independent experiments. (B) MDMs were pretreated with either vehicle or Ro-31-8220 for 30 minutes before the addition of M-CSF for 10 minutes.
T24507 578-1095 Sentence denotes Whole cell lysates were resolved by SDS-PAGE and phospho-Ser276 or phospho-Ser536 of NF-κB p65 was detected using phospho-specific antibodies to either residue of NF-κB p65. (C) Whole cell lysates of RAW 264.7 cells treated with vehicle control or Ro-31-8220 in the absence or presence of M-CSF were subjected to Western blot analysis with phospho-Ser276 or phospho-Ser536 NF-κB p65 antibodies. (D) Cytosolic and nuclear fractions of RAW 264.7 were obtained from the treated cells and immunoblotted for phospho-NF-κB.
T24508 1096-1215 Sentence denotes The purity of the cytosolic and nuclear fractions was confirmed by immunoblotting with GAPDH and Lamin B, respectively.
T24509 1216-1282 Sentence denotes Shown are representative blots from three independent experiments.
T133 0-163 Sentence denotes 10.1371/journal.pone.0028081.g005 Figure 5 M-CSF-induced PKC activity does not regulate IκBα degradation but regulates the phosphorylation of NF-κB p65 at Ser276.
T134 164-321 Sentence denotes (A) MDMs were pretreated with cycloheximide (CHX) in the absence or presence of Ro-31-8220 for 30 minutes prior to M-CSF stimulation for the indicated times.
T135 322-400 Sentence denotes Whole cell lysates were subjected to Western blotting with anti-IκBα antibody.
T136 401-577 Sentence denotes Data are representative of three independent experiments. (B) MDMs were pretreated with either vehicle or Ro-31-8220 for 30 minutes before the addition of M-CSF for 10 minutes.
T137 578-1095 Sentence denotes Whole cell lysates were resolved by SDS-PAGE and phospho-Ser276 or phospho-Ser536 of NF-κB p65 was detected using phospho-specific antibodies to either residue of NF-κB p65. (C) Whole cell lysates of RAW 264.7 cells treated with vehicle control or Ro-31-8220 in the absence or presence of M-CSF were subjected to Western blot analysis with phospho-Ser276 or phospho-Ser536 NF-κB p65 antibodies. (D) Cytosolic and nuclear fractions of RAW 264.7 were obtained from the treated cells and immunoblotted for phospho-NF-κB.
T138 1096-1215 Sentence denotes The purity of the cytosolic and nuclear fractions was confirmed by immunoblotting with GAPDH and Lamin B, respectively.
T139 1216-1282 Sentence denotes Shown are representative blots from three independent experiments.

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24550 276-278 TO denotes to
T24510 44-57 JJ denotes M-CSF-induced
T24511 58-61 NN denotes PKC
T24512 62-70 NN denotes activity
T24513 71-75 VBZ denotes does
T24514 76-79 RB denotes not
T24515 80-88 VB denotes regulate
T24516 89-93 NNP denotes IκBα
T24517 94-105 NN denotes degradation
T24518 106-109 CC denotes but
T24519 110-119 VBZ denotes regulates
T24520 120-123 DT denotes the
T24521 124-139 NN denotes phosphorylation
T24522 140-142 IN denotes of
T24523 143-148 NNP denotes NF-κB
T24524 149-152 NNS denotes p65
T24525 153-155 IN denotes at
T24526 156-162 NNP denotes Ser276
T24527 162-163 . denotes .
T24528 164-165 -LRB- denotes (
T24529 165-166 NNP denotes A
T24530 166-167 -RRB- denotes )
T24531 168-172 NNS denotes MDMs
T24532 173-177 VBD denotes were
T24533 178-188 VBN denotes pretreated
T24534 189-193 IN denotes with
T24535 194-207 NN denotes cycloheximide
T24536 208-209 -LRB- denotes (
T24537 209-212 NNP denotes CHX
T24538 212-213 -RRB- denotes )
T24539 214-216 IN denotes in
T24540 217-220 DT denotes the
T24541 221-228 NN denotes absence
T24542 229-231 CC denotes or
T24543 232-240 NN denotes presence
T24544 241-243 IN denotes of
T24545 244-254 NN denotes Ro-31-8220
T24546 255-258 IN denotes for
T24547 259-261 CD denotes 30
T24548 262-269 NNS denotes minutes
T24549 270-275 RB denotes prior
T24551 279-284 NNP denotes M-CSF
T24552 285-296 NN denotes stimulation
T24553 297-300 IN denotes for
T24554 301-304 DT denotes the
T24555 305-314 JJ denotes indicated
T24556 315-320 NNS denotes times
T24557 320-321 . denotes .
T24558 322-327 JJ denotes Whole
T24559 328-332 NN denotes cell
T24560 333-340 NNS denotes lysates
T24561 341-345 VBD denotes were
T24562 346-355 VBN denotes subjected
T24563 356-358 TO denotes to
T24564 359-366 JJ denotes Western
T24565 367-375 VBG denotes blotting
T24566 376-380 IN denotes with
T24567 381-390 JJ denotes anti-IκBα
T24568 391-399 NN denotes antibody
T24569 399-400 . denotes .
T24570 401-405 NNS denotes Data
T24571 406-409 VBP denotes are
T24572 410-424 NN denotes representative
T24573 425-427 IN denotes of
T24574 428-433 CD denotes three
T24575 434-445 JJ denotes independent
T24576 446-457 NNS denotes experiments
T24577 457-458 . denotes .
T24578 459-460 -LRB- denotes (
T24579 460-461 NNP denotes B
T24580 461-462 -RRB- denotes )
T24581 463-467 NNS denotes MDMs
T24582 468-472 VBD denotes were
T24583 473-483 VBN denotes pretreated
T24584 484-488 IN denotes with
T24585 489-495 DT denotes either
T24586 496-503 NN denotes vehicle
T24587 504-506 CC denotes or
T24588 507-517 NN denotes Ro-31-8220
T24589 518-521 IN denotes for
T24590 522-524 CD denotes 30
T24591 525-532 NNS denotes minutes
T24592 533-539 IN denotes before
T24593 540-543 DT denotes the
T24594 544-552 NN denotes addition
T24595 553-555 IN denotes of
T24596 556-561 NNP denotes M-CSF
T24597 562-565 IN denotes for
T24598 566-568 CD denotes 10
T24599 569-576 NNS denotes minutes
T24600 576-577 . denotes .
T24601 578-583 JJ denotes Whole
T24602 584-588 NN denotes cell
T24603 589-596 NNS denotes lysates
T24604 597-601 VBD denotes were
T24605 602-610 VBN denotes resolved
T24606 611-613 IN denotes by
T24607 614-622 NNP denotes SDS-PAGE
T24608 623-626 CC denotes and
T24609 627-641 NNP denotes phospho-Ser276
T24610 642-644 CC denotes or
T24611 645-659 NNP denotes phospho-Ser536
T24612 660-662 IN denotes of
T24613 663-668 NNP denotes NF-κB
T24614 669-672 CD denotes p65
T24615 673-676 VBD denotes was
T24616 677-685 VBN denotes detected
T24617 686-691 VBG denotes using
T24618 692-708 JJ denotes phospho-specific
T24619 709-719 NNS denotes antibodies
T24620 720-722 TO denotes to
T24621 723-729 DT denotes either
T24622 730-737 NN denotes residue
T24623 738-740 IN denotes of
T24624 741-746 NNP denotes NF-κB
T24625 747-750 NNS denotes p65
T24626 750-751 . denotes .
T24627 752-753 -LRB- denotes (
T24628 753-754 $ denotes C
T24629 754-755 -RRB- denotes )
T24630 756-761 JJ denotes Whole
T24631 762-766 NN denotes cell
T24632 767-774 NNS denotes lysates
T24633 775-777 IN denotes of
T24634 778-781 NNP denotes RAW
T24635 782-787 CD denotes 264.7
T24636 788-793 NNS denotes cells
T24637 794-801 VBN denotes treated
T24638 802-806 IN denotes with
T24639 807-814 NN denotes vehicle
T24640 815-822 NN denotes control
T24641 823-825 CC denotes or
T24642 826-836 NN denotes Ro-31-8220
T24643 837-839 IN denotes in
T24644 840-843 DT denotes the
T24645 844-851 NN denotes absence
T24646 852-854 CC denotes or
T24647 855-863 NN denotes presence
T24648 864-866 IN denotes of
T24649 867-872 NNP denotes M-CSF
T24650 873-877 VBD denotes were
T24651 878-887 VBN denotes subjected
T24652 888-890 TO denotes to
T24653 891-898 JJ denotes Western
T24654 899-903 NN denotes blot
T24655 904-912 NN denotes analysis
T24656 913-917 IN denotes with
T24657 918-932 NN denotes phospho-Ser276
T24658 933-935 CC denotes or
T24659 936-950 NN denotes phospho-Ser536
T24660 951-956 NNP denotes NF-κB
T24661 957-960 CD denotes p65
T24662 961-971 NNS denotes antibodies
T24663 971-972 . denotes .
T24664 973-974 -LRB- denotes (
T24665 974-975 NNP denotes D
T24666 975-976 -RRB- denotes )
T24667 977-986 NNP denotes Cytosolic
T24668 987-990 CC denotes and
T24669 991-998 JJ denotes nuclear
T24670 999-1008 NNS denotes fractions
T24671 1009-1011 IN denotes of
T24672 1012-1015 NNP denotes RAW
T24673 1016-1021 CD denotes 264.7
T24674 1022-1026 VBD denotes were
T24675 1027-1035 VBN denotes obtained
T24676 1036-1040 IN denotes from
T24677 1041-1044 DT denotes the
T24678 1045-1052 VBN denotes treated
T24679 1053-1058 NNS denotes cells
T24680 1059-1062 CC denotes and
T24681 1063-1076 VBN denotes immunoblotted
T24682 1077-1080 IN denotes for
T24683 1081-1094 NN denotes phospho-NF-κB
T24684 1094-1095 . denotes .
T24685 1096-1099 DT denotes The
T24686 1100-1106 NN denotes purity
T24687 1107-1109 IN denotes of
T24688 1110-1113 DT denotes the
T24689 1114-1123 JJ denotes cytosolic
T24690 1124-1127 CC denotes and
T24691 1128-1135 JJ denotes nuclear
T24692 1136-1145 NNS denotes fractions
T24693 1146-1149 VBD denotes was
T24694 1150-1159 VBN denotes confirmed
T24695 1160-1162 IN denotes by
T24696 1163-1177 VBG denotes immunoblotting
T24697 1178-1182 IN denotes with
T24698 1183-1188 NNP denotes GAPDH
T24699 1189-1192 CC denotes and
T24700 1193-1198 NNP denotes Lamin
T24701 1199-1200 NNP denotes B
T24702 1200-1201 , denotes ,
T24703 1202-1214 RB denotes respectively
T24704 1214-1215 . denotes .
T24705 1216-1221 VBN denotes Shown
T24706 1222-1225 VBP denotes are
T24707 1226-1240 JJ denotes representative
T24708 1241-1246 NNS denotes blots
T24709 1247-1251 IN denotes from
T24710 1252-1257 CD denotes three
T24711 1258-1269 JJ denotes independent
T24712 1270-1281 NNS denotes experiments
T24713 1281-1282 . denotes .
R18676 T24510 T24512 amod M-CSF-induced,activity
R18677 T24511 T24512 compound PKC,activity
R18678 T24512 T24515 nsubj activity,regulate
R18679 T24513 T24515 aux does,regulate
R18680 T24514 T24515 neg not,regulate
R18681 T24515 T24515 ROOT regulate,regulate
R18682 T24516 T24517 compound IκBα,degradation
R18683 T24517 T24515 dobj degradation,regulate
R18684 T24518 T24515 cc but,regulate
R18685 T24519 T24515 conj regulates,regulate
R18686 T24520 T24521 det the,phosphorylation
R18687 T24521 T24519 dobj phosphorylation,regulates
R18688 T24522 T24521 prep of,phosphorylation
R18689 T24523 T24524 compound NF-κB,p65
R18690 T24524 T24522 pobj p65,of
R18691 T24525 T24519 prep at,regulates
R18692 T24526 T24525 pobj Ser276,at
R18693 T24527 T24515 punct .,regulate
R18694 T24528 T24529 punct (,A
R18695 T24529 T24529 ROOT A,A
R18696 T24530 T24529 punct ),A
R18697 T24531 T24533 nsubjpass MDMs,pretreated
R18698 T24532 T24533 auxpass were,pretreated
R18699 T24533 T24533 ROOT pretreated,pretreated
R18700 T24534 T24533 prep with,pretreated
R18701 T24535 T24534 pobj cycloheximide,with
R18702 T24536 T24535 punct (,cycloheximide
R18703 T24537 T24535 appos CHX,cycloheximide
R18704 T24538 T24535 punct ),cycloheximide
R18713 T24547 T24548 nummod 30,minutes
R18714 T24548 T24546 pobj minutes,for
R18715 T24549 T24533 advmod prior,pretreated
R18716 T24550 T24549 prep to,prior
R18717 T24551 T24552 compound M-CSF,stimulation
R18718 T24552 T24550 pobj stimulation,to
R18719 T24553 T24549 prep for,prior
R18720 T24554 T24556 det the,times
R18721 T24555 T24556 amod indicated,times
R18722 T24556 T24553 pobj times,for
R18723 T24557 T24533 punct .,pretreated
R18724 T24558 T24560 amod Whole,lysates
R18725 T24559 T24560 compound cell,lysates
R18726 T24560 T24562 nsubjpass lysates,subjected
R18727 T24561 T24562 auxpass were,subjected
R18728 T24562 T24562 ROOT subjected,subjected
R18729 T24563 T24562 prep to,subjected
R18730 T24564 T24565 amod Western,blotting
R18731 T24565 T24563 pobj blotting,to
R18732 T24566 T24562 prep with,subjected
R18733 T24567 T24568 amod anti-IκBα,antibody
R18734 T24568 T24566 pobj antibody,with
R18735 T24569 T24562 punct .,subjected
R18736 T24570 T24571 nsubj Data,are
R18737 T24571 T24571 ROOT are,are
R18738 T24572 T24571 attr representative,are
R18739 T24573 T24572 prep of,representative
R18740 T24574 T24576 nummod three,experiments
R18741 T24575 T24576 amod independent,experiments
R18742 T24576 T24573 pobj experiments,of
R18743 T24577 T24571 punct .,are
R18744 T24578 T24579 punct (,B
R18745 T24579 T24579 ROOT B,B
R18746 T24580 T24579 punct ),B
R18747 T24581 T24583 nsubjpass MDMs,pretreated
R18748 T24582 T24583 auxpass were,pretreated
R18749 T24583 T24583 ROOT pretreated,pretreated
R18750 T24584 T24583 prep with,pretreated
R18751 T24585 T24586 det either,vehicle
R18752 T24586 T24584 pobj vehicle,with
R18753 T24587 T24586 cc or,vehicle
R18754 T24588 T24586 conj Ro-31-8220,vehicle
R18755 T24589 T24583 prep for,pretreated
R18756 T24590 T24591 nummod 30,minutes
R18757 T24591 T24589 pobj minutes,for
R18758 T24592 T24591 prep before,minutes
R18759 T24593 T24594 det the,addition
R18760 T24594 T24592 pobj addition,before
R18761 T24595 T24594 prep of,addition
R18762 T24596 T24595 pobj M-CSF,of
R18763 T24597 T24583 prep for,pretreated
R18764 T24598 T24599 nummod 10,minutes
R18765 T24599 T24597 pobj minutes,for
R18766 T24600 T24583 punct .,pretreated
R18767 T24601 T24602 amod Whole,cell
R18768 T24602 T24603 compound cell,lysates
R18769 T24603 T24605 nsubjpass lysates,resolved
R18770 T24604 T24605 auxpass were,resolved
R18771 T24605 T24605 ROOT resolved,resolved
R18772 T24606 T24605 agent by,resolved
R18773 T24607 T24606 pobj SDS-PAGE,by
R18774 T24608 T24607 cc and,SDS-PAGE
R18775 T24609 T24607 conj phospho-Ser276,SDS-PAGE
R18776 T24610 T24609 cc or,phospho-Ser276
R18777 T24611 T24609 conj phospho-Ser536,phospho-Ser276
R18778 T24612 T24611 prep of,phospho-Ser536
R18779 T24613 T24612 pobj NF-κB,of
R18780 T24614 T24613 nummod p65,NF-κB
R18781 T24615 T24616 auxpass was,detected
R18782 T24616 T24605 conj detected,resolved
R18783 T24617 T24616 advcl using,detected
R18784 T24618 T24619 amod phospho-specific,antibodies
R18785 T24619 T24617 dobj antibodies,using
R18786 T24620 T24617 prep to,using
R18787 T24621 T24622 det either,residue
R18788 T24622 T24620 pobj residue,to
R18789 T24623 T24622 prep of,residue
R18790 T24624 T24625 compound NF-κB,p65
R18791 T24625 T24623 pobj p65,of
R18792 T24626 T24605 punct .,resolved
R18793 T24627 T24628 punct (,C
R18794 T24628 T24632 nmod C,lysates
R18795 T24629 T24628 punct ),C
R18796 T24630 T24631 amod Whole,cell
R18797 T24631 T24632 compound cell,lysates
R18798 T24632 T24651 nsubjpass lysates,subjected
R18799 T24633 T24632 prep of,lysates
R18800 T24634 T24633 pobj RAW,of
R18801 T24635 T24634 nummod 264.7,RAW
R18802 T24636 T24632 conj cells,lysates
R18803 T24637 T24632 acl treated,lysates
R18804 T24638 T24637 prep with,treated
R18805 T24639 T24640 compound vehicle,control
R18806 T24640 T24638 pobj control,with
R18807 T24641 T24640 cc or,control
R18808 T24642 T24640 conj Ro-31-8220,control
R18809 T24643 T24637 prep in,treated
R18810 T24644 T24645 det the,absence
R18811 T24645 T24643 pobj absence,in
R18812 T24646 T24645 cc or,absence
R18813 T24647 T24645 conj presence,absence
R18814 T24648 T24645 prep of,absence
R18815 T24649 T24648 pobj M-CSF,of
R18816 T24650 T24651 auxpass were,subjected
R18817 T24651 T24651 ROOT subjected,subjected
R18818 T24652 T24651 prep to,subjected
R18819 T24653 T24655 amod Western,analysis
R18820 T24654 T24655 compound blot,analysis
R18821 T24655 T24652 pobj analysis,to
R18822 T24656 T24655 prep with,analysis
R18823 T24657 T24656 pobj phospho-Ser276,with
R18824 T24658 T24657 cc or,phospho-Ser276
R18825 T24659 T24660 compound phospho-Ser536,NF-κB
R18826 T24660 T24657 conj NF-κB,phospho-Ser276
R18827 T24661 T24662 nummod p65,antibodies
R18828 T24662 T24656 pobj antibodies,with
R18829 T24663 T24651 punct .,subjected
R18830 T24664 T24667 punct (,Cytosolic
R18831 T24665 T24667 nmod D,Cytosolic
R18832 T24666 T24667 punct ),Cytosolic
R18833 T24667 T24675 nsubjpass Cytosolic,obtained
R18834 T24668 T24667 cc and,Cytosolic
R18835 T24669 T24670 amod nuclear,fractions
R18836 T24670 T24667 conj fractions,Cytosolic
R18837 T24671 T24670 prep of,fractions
R18838 T24672 T24675 nsubjpass RAW,obtained
R18839 T24673 T24672 nummod 264.7,RAW
R18840 T24674 T24675 auxpass were,obtained
R18841 T24675 T24675 ROOT obtained,obtained
R18842 T24676 T24675 prep from,obtained
R18843 T24677 T24679 det the,cells
R18844 T24678 T24679 amod treated,cells
R18845 T24679 T24676 pobj cells,from
R18846 T24680 T24675 cc and,obtained
R18847 T24681 T24675 conj immunoblotted,obtained
R18848 T24682 T24681 prep for,immunoblotted
R18849 T24683 T24682 pobj phospho-NF-κB,for
R18850 T24684 T24675 punct .,obtained
R18851 T24685 T24686 det The,purity
R18852 T24686 T24694 nsubjpass purity,confirmed
R18853 T24687 T24686 prep of,purity
R18854 T24688 T24692 det the,fractions
R18855 T24689 T24692 amod cytosolic,fractions
R18856 T24690 T24689 cc and,cytosolic
R18857 T24691 T24689 conj nuclear,cytosolic
R18858 T24692 T24687 pobj fractions,of
R18859 T24693 T24694 auxpass was,confirmed
R18860 T24694 T24694 ROOT confirmed,confirmed
R18861 T24695 T24694 agent by,confirmed
R18862 T24696 T24695 pcomp immunoblotting,by
R18863 T24697 T24696 prep with,immunoblotting
R18864 T24698 T24697 pobj GAPDH,with
R18865 T24699 T24698 cc and,GAPDH
R18866 T24700 T24701 compound Lamin,B
R18867 T24701 T24698 conj B,GAPDH
R18868 T24702 T24696 punct ",",immunoblotting
R18869 T24703 T24696 advmod respectively,immunoblotting
R18870 T24704 T24694 punct .,confirmed
R18872 T24706 T24705 auxpass are,Shown
R18873 T24707 T24708 compound representative,blots
R18874 T24708 T24705 nsubjpass blots,Shown
R18875 T24709 T24708 prep from,blots
R18876 T24710 T24712 nummod three,experiments
R18877 T24711 T24712 amod independent,experiments
R18878 T24712 T24709 pobj experiments,from
R18879 T24713 T24705 punct .,Shown
R18705 T24539 T24533 prep in,pretreated
R18706 T24540 T24541 det the,absence
R18707 T24541 T24539 pobj absence,in
R18708 T24542 T24541 cc or,absence
R18709 T24543 T24541 conj presence,absence
R18710 T24544 T24541 prep of,absence
R18711 T24545 T24544 pobj Ro-31-8220,of
R18712 T24546 T24533 prep for,pretreated
R18871 T24705 T24705 ROOT Shown,Shown

test2

Id Subject Object Predicate Lexical cue Negation Speculation
T24487 44-49 Protein denotes M-CSF true
T24488 80-88 Regulation denotes regulate
T24489 89-93 Protein denotes IκBα
T24490 94-105 Protein_catabolism denotes degradation
T24491 110-119 Regulation denotes regulates true
T24492 124-139 Phosphorylation denotes phosphorylation true
T24493 149-152 Protein denotes p65
T24494 156-162 Entity denotes Ser276
T24495 279-284 Protein denotes M-CSF
T24496 556-561 Protein denotes M-CSF
T24497 645-652 Phosphorylation denotes phospho
T24498 669-672 Protein denotes p65
T24499 747-750 Protein denotes p65
T24500 867-872 Protein denotes M-CSF
T24501 918-925 Phosphorylation denotes phospho
T24502 936-943 Phosphorylation denotes phospho
R18669 T24487 T24488 causeOf M-CSF,regulate
R18670 T24487 T24491 causeOf M-CSF,regulates
R18671 T24489 T24490 themeOf IκBα,degradation
R18672 T24490 T24488 themeOf degradation,regulate
R18673 T24492 T24491 themeOf phosphorylation,regulates
R18674 T24494 T24493 partOf Ser276,p65
R18675 T24494 T24492 themeOf Ser276,phosphorylation