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PMC:3245220 / 15646-17455 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7333 0-5 P09603 denotes M-CSF
T7334 2-5 P04141 denotes CSF
T7335 14-18 P17252 denotes PKCα
T7336 132-137 P09603 denotes M-CSF
T7337 134-137 P04141 denotes CSF
T7338 219-223 P17252 denotes PKCα
T7339 251-256 P09603 denotes M-CSF
T7340 253-256 P04141 denotes CSF
T7341 272-276 P17252 denotes PKCα
T7342 691-696 P09603 denotes M-CSF
T7343 693-696 P04141 denotes CSF
T7344 849-853 P17252 denotes PKCα
T7345 889-893 P17252 denotes PKCα
T24373 977-982 P09603 denotes M-CSF
T24374 979-982 P04141 denotes CSF
T24375 993-997 P17252 denotes PKCα
T24376 1031-1036 P09603 denotes M-CSF
T24377 1033-1036 P04141 denotes CSF
T24378 1406-1410 P17252 denotes PKCα
T24379 1600-1604 P17252 denotes PKCα
T24380 1652-1657 P09603 denotes M-CSF
T24381 1654-1657 P04141 denotes CSF
T24382 1751-1756 P09603 denotes M-CSF
T24383 1753-1756 P04141 denotes CSF

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T7346 230-247 Regulation denotes downstream target true
T7347 14-18 Protein denotes PKCα
T7348 219-223 Protein denotes PKCα
T7349 0-5 Protein denotes M-CSF
T7350 132-137 Protein denotes M-CSF
T7351 251-256 Protein denotes M-CSF
T7352 691-696 Protein denotes M-CSF
T24384 983-992 Positive_regulation denotes activates
T24385 993-997 Protein denotes PKCα
T24386 1406-1410 Protein denotes PKCα
T24387 1600-1604 Protein denotes PKCα
T24388 977-982 Protein denotes M-CSF
T24389 1031-1036 Protein denotes M-CSF
T24390 1652-1657 Protein denotes M-CSF
T24391 1751-1756 Protein denotes M-CSF
R5490 T7348 T7346 themeOf PKCα,downstream target
R5491 T7351 T7346 causeOf M-CSF,downstream target
R18644 T24385 T24384 themeOf PKCα,activates
R18645 T24388 T24384 causeOf M-CSF,activates

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T7418 14-25 Protein denotes PKCα Kinase
T7419 78-82 Protein denotes PKCs
T7420 111-116 Protein denotes NF-κB
T7421 132-137 Protein denotes M-CSF
T7422 214-217 Protein denotes PKC
T7423 219-223 Protein denotes PKCα
T7424 251-256 Protein denotes M-CSF
T7425 100-110 Positive_regulation denotes activating
T7426 241-247 Positive_regulation denotes target
T7427 272-276 Protein denotes PKCα
T7428 368-378 Protein denotes PKC kinase
T7429 744-747 Protein denotes IgG
T7430 828-853 Protein denotes antibody recognizing PKCα
T7431 889-893 Protein denotes PKCα
T24459 977-982 Protein denotes M-CSF
T24460 993-997 Protein denotes PKCα
T24461 983-992 Positive_regulation denotes activates
T24462 1031-1036 Protein denotes M-CSF
T24463 1117-1134 Protein denotes anti-PKC antibody
T24464 1138-1158 Protein denotes control IgG antibody
T24465 1204-1214 Protein denotes PKC kinase
T24466 1406-1410 Protein denotes PKCα
T24467 1534-1537 Protein denotes Rad
T24468 1600-1604 Protein denotes PKCα
T24469 1652-1657 Protein denotes M-CSF
T24470 1751-1756 Protein denotes M-CSF
R5506 T7420 T7425 themeOf NF-κB,activating
R5507 T7423 T7426 causeOf PKCα,target
R5508 T7424 T7426 themeOf M-CSF,target
R18658 T24459 T24461 causeOf M-CSF,activates
R18659 T24460 T24461 themeOf PKCα,activates

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T7411 0-5 Protein denotes M-CSF
T7412 14-18 Protein denotes PKCα
T7413 132-137 Protein denotes M-CSF
T7414 219-223 Protein denotes PKCα
T7415 230-247 Regulation denotes downstream target true
T7416 251-256 Protein denotes M-CSF
T7417 691-696 Protein denotes M-CSF
T24451 977-982 Protein denotes M-CSF
T24452 983-992 Positive_regulation denotes activates
T24453 993-997 Protein denotes PKCα
T24454 1031-1036 Protein denotes M-CSF
T24455 1406-1410 Protein denotes PKCα
T24456 1600-1604 Protein denotes PKCα
T24457 1652-1657 Protein denotes M-CSF
T24458 1751-1756 Protein denotes M-CSF
R5504 T7414 T7415 themeOf PKCα,downstream target
R5505 T7416 T7415 causeOf M-CSF,downstream target
R18656 T24451 T24452 causeOf M-CSF,activates
R18657 T24453 T24452 themeOf PKCα,activates

GO-CC

Id Subject Object Predicate Lexical cue
T7368 593-598 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7369 732-742 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T7370 828-836 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T7371 732-742 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T7372 828-836 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T24405 1126-1134 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T24406 1150-1158 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T24407 1126-1134 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T24408 1150-1158 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T24409 1146-1158 http://purl.obolibrary.org/obo/GO_0071736 denotes IgG antibody

GO-MF

Id Subject Object Predicate Lexical cue
T7359 14-18 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T7360 219-223 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T7361 272-276 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T7362 849-853 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T7363 214-217 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC
T7364 368-371 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC
T7365 19-34 http://purl.obolibrary.org/obo/GO_0016301 denotes Kinase Activity
T7366 732-742 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T7367 828-836 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T24398 993-997 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T24399 1406-1410 http://purl.obolibrary.org/obo/GO_0004697 denotes PKCα
T24400 1122-1125 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC
T24401 1204-1207 http://purl.obolibrary.org/obo/GO_0004697 denotes PKC
T24402 1126-1134 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T24403 1150-1158 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T24404 1208-1223 http://purl.obolibrary.org/obo/GO_0016301 denotes kinase activity

GO-BP

Id Subject Object Predicate Lexical cue
T7432 120-137 http://purl.obolibrary.org/obo/GO_0036005 denotes response to M-CSF
T7433 120-137 http://purl.obolibrary.org/obo/GO_1903970 denotes response to M-CSF
T7434 120-137 http://purl.obolibrary.org/obo/GO_1903971 denotes response to M-CSF
T7435 19-34 http://purl.obolibrary.org/obo/GO_0016301 denotes Kinase Activity
T7436 100-116 http://purl.obolibrary.org/obo/GO_0051092 denotes activating NF-κB
T7437 120-137 http://purl.obolibrary.org/obo/GO_1903969 denotes response to M-CSF
T24471 977-992 http://purl.obolibrary.org/obo/GO_1901258 denotes M-CSF activates
T24472 977-992 http://purl.obolibrary.org/obo/GO_1903971 denotes M-CSF activates
T24473 1208-1223 http://purl.obolibrary.org/obo/GO_0016301 denotes kinase activity

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7176 0-13 VB denotes M-CSF-Induces
T7177 14-18 NNP denotes PKCα
T7178 19-25 NNP denotes Kinase
T7179 26-34 NN denotes Activity
T7180 35-40 IN denotes Since
T7181 41-44 PRP-DOLLAR- denotes our
T7182 45-49 NN denotes data
T7183 50-59 VB denotes suggested
T7184 60-64 IN denotes that
T7185 65-77 JJ denotes conventional
T7186 78-82 NN denotes PKCs
T7187 83-87 VB denotes were
T7188 88-96 VB denotes involved
T7189 97-99 IN denotes in
T7190 100-110 VB denotes activating
T7191 111-116 NN denotes NF-κB
T7192 117-119 IN denotes in
T7193 120-128 NN denotes response
T7194 129-131 TO denotes to
T7195 132-137 NN denotes M-CSF
T7196 138-140 IN denotes in
T7197 141-148 JJ denotes primary
T7198 149-154 JJ denotes human
T7199 155-166 NN denotes macrophages
T7200 166-167 -COMMA- denotes ,
T7201 168-170 PRP denotes we
T7202 171-175 RB denotes next
T7203 176-188 VB denotes investigated
T7204 189-196 IN denotes whether
T7205 197-200 DT denotes the
T7206 201-213 JJ denotes conventional
T7207 214-217 NN denotes PKC
T7208 217-218 -COMMA- denotes ,
T7209 219-223 NN denotes PKCα
T7210 224-227 VB denotes was
T7211 228-229 DT denotes a
T7212 230-240 JJ denotes downstream
T7213 241-247 NN denotes target
T7214 248-250 IN denotes of
T7215 251-256 NN denotes M-CSF
T7216 257-259 IN denotes in
T7217 260-265 JJ denotes human
T7218 266-270 NN denotes MDMs
T7219 272-276 NN denotes PKCα
T7220 277-280 VB denotes was
T7221 281-299 VB denotes immunoprecipitated
T7222 300-304 IN denotes from
T7223 305-310 JJ denotes human
T7224 311-315 NN denotes MDMs
T7225 316-318 IN denotes at
T7226 319-322 DT denotes the
T7227 323-332 VB denotes indicated
T7228 333-337 NN denotes time
T7229 338-344 NN denotes points
T7230 345-346 -LRB- denotes (
T7231 346-352 NN denotes Figure
T7232 353-354 CD denotes 4
T7233 354-355 -RRB- denotes )
T7234 355-356 -COMMA- denotes ,
T7235 357-360 CC denotes and
T7236 361-365 RB denotes then
T7237 366-367 DT denotes a
T7238 368-371 NN denotes PKC
T7239 372-378 NN denotes kinase
T7240 379-384 NN denotes assay
T7241 385-388 VB denotes was
T7242 389-398 VB denotes performed
T7243 399-404 VB denotes using
T7244 405-406 DT denotes a
T7245 407-425 JJ denotes fluorescein-tagged
T7246 426-433 NN denotes peptide
T7247 434-436 IN denotes as
T7248 437-438 DT denotes a
T7249 439-448 NN denotes substrate
T7250 450-452 IN denotes As
T7251 453-458 VB denotes shown
T7252 459-461 IN denotes in
T7253 462-468 NN denotes Figure
T7254 469-470 CD denotes 4
T7255 471-472 -LRB- denotes (
T7256 472-477 JJ denotes upper
T7257 478-483 NN denotes panel
T7258 483-484 -RRB- denotes )
T7259 484-485 -COMMA- denotes ,
T7260 486-489 DT denotes the
T7261 490-497 NN denotes peptide
T7262 498-507 NN denotes substrate
T7263 508-511 VB denotes was
T7264 512-521 RB denotes maximally
T7265 522-536 VB denotes phosphorylated
T7266 537-543 IN denotes within
T7267 544-546 CD denotes 10
T7268 547-554 NN denotes minutes
T7269 555-557 IN denotes of
T7270 558-569 NN denotes stimulation
T7271 570-571 -LRB- denotes (
T7272 571-579 RB denotes 1.8-fold
T7273 580-584 IN denotes over
T7274 585-592 VB denotes resting
T7275 593-598 NN denotes cells
T7276 598-599 -COMMA- denotes ,
T7277 600-605 JJ denotes lower
T7278 606-611 NN denotes panel
T7279 611-612 -RRB- denotes )
T7280 612-613 -COMMA- denotes ,
T7281 614-617 CC denotes and
T7282 618-622 RB denotes then
T7283 623-631 VB denotes returned
T7284 632-634 TO denotes to
T7285 635-640 JJ denotes basal
T7286 641-647 NN denotes levels
T7287 648-650 IN denotes by
T7288 651-653 CD denotes 15
T7289 654-661 NN denotes minutes
T7290 663-667 DT denotes This
T7291 668-674 NN denotes effect
T7292 675-678 VB denotes was
T7293 679-682 RB denotes not
T7294 683-687 VB denotes seen
T7295 688-690 IN denotes in
T7296 691-707 JJ denotes M-CSF-stimulated
T7297 708-717 NN denotes monocytes
T7298 718-722 WRB denotes when
T7299 723-731 JJ denotes isogenic
T7300 732-742 NN denotes antibodies
T7301 743-744 -LRB- denotes (
T7302 744-747 NN denotes IgG
T7303 747-748 -RRB- denotes )
T7304 749-753 VB denotes were
T7305 754-758 VB denotes used
T7306 759-762 IN denotes for
T7307 763-782 NN denotes immunoprecipitation
T7308 784-791 JJ denotes Western
T7309 792-797 NN denotes blots
T7310 798-800 IN denotes of
T7311 801-810 JJ denotes identical
T7312 811-818 NN denotes samples
T7313 819-824 VB denotes using
T7314 825-827 DT denotes an
T7315 828-836 NN denotes antibody
T7316 837-848 VB denotes recognizing
T7317 849-853 NN denotes PKCα
T7318 854-866 VB denotes demonstrated
T7319 867-871 IN denotes that
T7320 872-877 JJ denotes equal
T7321 878-885 NN denotes amounts
T7322 886-888 IN denotes of
T7323 889-893 NN denotes PKCα
T7324 894-898 VB denotes were
T7325 899-906 VB denotes assayed
T7326 907-908 -LRB- denotes (
T7327 908-914 NN denotes Figure
T7328 915-916 CD denotes 4
T7329 916-917 -COMMA- denotes ,
T7330 918-924 JJ denotes middle
T7331 925-930 NN denotes panel
T7332 930-931 -RRB- denotes )
T24238 977-982 NN denotes M-CSF
T24239 983-992 VB denotes activates
T24240 993-997 NN denotes PKCα
T24241 998-1000 IN denotes in
T24242 1001-1006 JJ denotes human
T24243 1007-1011 NN denotes MDMs
T24244 1013-1017 NN denotes MDMs
T24245 1018-1025 VB denotes treated
T24246 1026-1030 IN denotes with
T24247 1031-1036 NN denotes M-CSF
T24248 1037-1038 -LRB- denotes (
T24249 1038-1041 CD denotes 100
T24250 1042-1047 NN denotes ng/ml
T24251 1047-1048 -RRB- denotes )
T24252 1049-1052 IN denotes for
T24253 1053-1060 VB denotes varying
T24254 1061-1068 NN denotes amounts
T24255 1069-1071 IN denotes of
T24256 1072-1076 NN denotes time
T24257 1077-1081 VB denotes were
T24258 1082-1087 VB denotes lysed
T24259 1088-1091 CC denotes and
T24260 1092-1110 VB denotes immunoprecipitated
T24261 1111-1116 VB denotes using
T24262 1117-1125 JJ denotes anti-PKC
T24263 1126-1134 NN denotes antibody
T24264 1135-1137 CC denotes or
T24265 1138-1145 NN denotes control
T24266 1146-1149 NN denotes IgG
T24267 1150-1158 NN denotes antibody
T24268 1160-1163 CD denotes One
T24269 1164-1168 NN denotes half
T24270 1169-1171 IN denotes of
T24271 1172-1175 DT denotes the
T24272 1176-1183 NN denotes samples
T24273 1184-1187 VB denotes was
T24274 1188-1192 VB denotes used
T24275 1193-1195 TO denotes to
T24276 1196-1203 VB denotes analyze
T24277 1204-1207 NN denotes PKC
T24278 1208-1214 NN denotes kinase
T24279 1215-1223 NN denotes activity
T24280 1224-1229 VB denotes using
T24281 1230-1231 DT denotes a
T24282 1232-1243 NN denotes fluorescein
T24283 1244-1250 VB denotes tagged
T24284 1251-1258 NN denotes peptide
T24285 1259-1262 CC denotes and
T24286 1263-1273 VB denotes visualized
T24287 1274-1276 IN denotes by
T24288 1277-1284 NN denotes agarose
T24289 1285-1288 NN denotes gel
T24290 1289-1304 NN denotes electrophoresis
T24291 1305-1306 -LRB- denotes (
T24292 1306-1309 JJ denotes top
T24293 1310-1315 NN denotes panel
T24294 1315-1316 -RRB- denotes )
T24295 1316-1317 -COMMA- denotes ,
T24296 1318-1323 IN denotes while
T24297 1324-1327 DT denotes the
T24298 1328-1333 JJ denotes other
T24299 1334-1338 NN denotes half
T24300 1339-1342 VB denotes was
T24301 1343-1352 VB denotes subjected
T24302 1353-1355 TO denotes to
T24303 1356-1363 JJ denotes Western
T24304 1364-1368 NN denotes blot
T24305 1369-1377 NN denotes analysis
T24306 1378-1380 TO denotes to
T24307 1381-1388 VB denotes confirm
T24308 1389-1394 JJ denotes equal
T24309 1395-1402 NN denotes amounts
T24310 1403-1405 IN denotes of
T24311 1406-1410 NN denotes PKCα
T24312 1411-1415 VB denotes were
T24313 1416-1434 VB denotes immunoprecipitated
T24314 1435-1439 IN denotes from
T24315 1440-1444 DT denotes each
T24316 1445-1451 NN denotes sample
T24317 1452-1453 -LRB- denotes (
T24318 1453-1459 JJ denotes middle
T24319 1460-1465 NN denotes panel
T24320 1465-1466 -RRB- denotes )
T24321 1468-1471 DT denotes The
T24322 1472-1478 NN denotes kinase
T24323 1479-1484 NN denotes assay
T24324 1485-1488 VB denotes was
T24325 1489-1500 VB denotes quantitated
T24326 1501-1506 VB denotes using
T24327 1507-1515 NN denotes Quantity
T24328 1516-1519 CD denotes One
T24329 1520-1528 NN denotes software
T24330 1529-1530 -LRB- denotes (
T24331 1530-1537 NN denotes Bio-Rad
T24332 1537-1538 -RRB- denotes )
T24333 1539-1540 -LRB- denotes (
T24334 1540-1546 JJ denotes bottom
T24335 1547-1552 NN denotes panel
T24336 1552-1553 -RRB- denotes )
T24337 1555-1559 NN denotes Data
T24338 1560-1570 VB denotes represents
T24339 1571-1574 DT denotes the
T24340 1575-1582 JJ denotes average
T24341 1583-1587 JJ denotes fold
T24342 1588-1596 NN denotes increase
T24343 1597-1599 IN denotes of
T24344 1600-1604 NN denotes PKCα
T24345 1605-1613 NN denotes activity
T24346 1614-1616 IN denotes in
T24347 1617-1631 JJ denotes non-stimulated
T24348 1632-1639 NN denotes samples
T24349 1640-1648 VB denotes compared
T24350 1649-1651 TO denotes to
T24351 1652-1665 JJ denotes M-CSF-treated
T24352 1666-1669 NN denotes MDM
T24353 1670-1671 NN denotes ±
T24354 1672-1677 NN denotes S.E.M
T24355 1678-1681 IN denotes for
T24356 1682-1687 CD denotes three
T24357 1688-1699 JJ denotes independent
T24358 1700-1711 NN denotes experiments
T24359 1713-1715 NN denotes NS
T24360 1715-1716 -COLON- denotes :
T24361 1717-1732 JJ denotes non-stimulated.
T24362 1733-1734 SYM denotes *
T24363 1735-1738 DT denotes The
T24364 1739-1747 NN denotes p-values
T24365 1748-1750 IN denotes of
T24366 1751-1756 NN denotes M-CSF
T24367 1757-1767 VB denotes stimulated
T24368 1768-1776 VB denotes compared
T24369 1777-1779 TO denotes to
T24370 1780-1794 JJ denotes non-stimulated
T24371 1795-1799 VB denotes were
T24372 1800-1805 CD denotes ≤0.05
R5331 T7178 T7177 arg1Of Kinase,PKCα
R5332 T7179 T7176 arg1Of Activity,M-CSF-Induces
R5333 T7179 T7178 arg1Of Activity,Kinase
R5334 T7182 T7181 arg1Of data,our
R5335 T7182 T7183 arg1Of data,suggested
R5336 T7183 T7180 arg2Of suggested,Since
R5337 T7186 T7185 arg1Of PKCs,conventional
R5338 T7186 T7187 arg1Of PKCs,were
R5339 T7186 T7188 arg2Of PKCs,involved
R5340 T7188 T7183 arg2Of involved,suggested
R5341 T7188 T7184 arg1Of involved,that
R5342 T7188 T7187 arg2Of involved,were
R5343 T7188 T7189 arg1Of involved,in
R5344 T7190 T7189 arg2Of activating,in
R5345 T7190 T7192 arg1Of activating,in
R5346 T7191 T7190 arg2Of NF-κB,activating
R5347 T7193 T7192 arg2Of response,in
R5348 T7193 T7194 arg1Of response,to
R5349 T7195 T7194 arg2Of M-CSF,to
R5350 T7195 T7196 arg1Of M-CSF,in
R5351 T7199 T7196 arg2Of macrophages,in
R5352 T7199 T7197 arg1Of macrophages,primary
R5353 T7199 T7198 arg1Of macrophages,human
R5354 T7201 T7203 arg1Of we,investigated
R5355 T7203 T7180 arg1Of investigated,Since
R5356 T7203 T7200 arg1Of investigated,","
R5357 T7203 T7202 arg1Of investigated,next
R5358 T7207 T7205 arg1Of PKC,the
R5359 T7207 T7206 arg1Of PKC,conventional
R5360 T7207 T7208 arg1Of PKC,","
R5361 T7207 T7210 arg1Of PKC,was
R5362 T7209 T7208 arg2Of PKCα,","
R5363 T7210 T7203 arg2Of was,investigated
R5364 T7210 T7204 arg1Of was,whether
R5365 T7213 T7210 arg2Of target,was
R5366 T7213 T7211 arg1Of target,a
R5367 T7213 T7212 arg1Of target,downstream
R5368 T7213 T7214 arg1Of target,of
R5369 T7213 T7216 arg1Of target,in
R5370 T7215 T7214 arg2Of M-CSF,of
R5371 T7218 T7216 arg2Of MDMs,in
R5372 T7218 T7217 arg1Of MDMs,human
R5373 T7219 T7220 arg1Of PKCα,was
R5374 T7219 T7221 arg2Of PKCα,immunoprecipitated
R5375 T7221 T7220 arg2Of immunoprecipitated,was
R5376 T7221 T7222 arg1Of immunoprecipitated,from
R5377 T7221 T7225 arg1Of immunoprecipitated,at
R5378 T7221 T7235 arg1Of immunoprecipitated,and
R5379 T7224 T7222 arg2Of MDMs,from
R5380 T7224 T7223 arg1Of MDMs,human
R5381 T7229 T7225 arg2Of points,at
R5382 T7229 T7226 arg1Of points,the
R5383 T7229 T7227 arg2Of points,indicated
R5384 T7229 T7228 arg1Of points,time
R5385 T7229 T7230 arg1Of points,(
R5386 T7231 T7230 arg2Of Figure,(
R5387 T7231 T7232 arg1Of Figure,4
R5388 T7233 T7230 arg3Of ),(
R5389 T7235 T7234 arg1Of and,","
R5390 T7240 T7236 arg1Of assay,then
R5391 T7240 T7237 arg1Of assay,a
R5392 T7240 T7238 arg1Of assay,PKC
R5393 T7240 T7239 arg1Of assay,kinase
R5394 T7240 T7241 arg1Of assay,was
R5395 T7240 T7242 arg2Of assay,performed
R5396 T7242 T7235 arg2Of performed,and
R5397 T7242 T7241 arg2Of performed,was
R5398 T7243 T7242 arg3Of using,performed
R5399 T7243 T7247 arg1Of using,as
R5400 T7246 T7243 arg2Of peptide,using
R5401 T7246 T7244 arg1Of peptide,a
R5402 T7246 T7245 arg1Of peptide,fluorescein-tagged
R5403 T7249 T7247 arg2Of substrate,as
R5404 T7249 T7248 arg1Of substrate,a
R5405 T7251 T7250 arg2Of shown,As
R5406 T7251 T7252 arg1Of shown,in
R5407 T7253 T7252 arg2Of Figure,in
R5408 T7253 T7254 arg1Of Figure,4
R5409 T7253 T7255 arg1Of Figure,(
R5410 T7257 T7255 arg2Of panel,(
R5411 T7257 T7256 arg1Of panel,upper
R5412 T7258 T7255 arg3Of ),(
R5413 T7262 T7260 arg1Of substrate,the
R5414 T7262 T7261 arg1Of substrate,peptide
R5415 T7262 T7263 arg1Of substrate,was
R5416 T7262 T7265 arg2Of substrate,phosphorylated
R5417 T7262 T7283 arg1Of substrate,returned
R5418 T7265 T7263 arg2Of phosphorylated,was
R5419 T7265 T7264 arg1Of phosphorylated,maximally
R5420 T7265 T7266 arg1Of phosphorylated,within
R5421 T7265 T7271 arg1Of phosphorylated,(
R5422 T7265 T7281 arg1Of phosphorylated,and
R5423 T7268 T7266 arg2Of minutes,within
R5424 T7268 T7267 arg1Of minutes,10
R5425 T7268 T7269 arg1Of minutes,of
R5426 T7270 T7269 arg2Of stimulation,of
R5427 T7272 T7271 arg2Of 1.8-fold,(
R5428 T7272 T7273 arg1Of 1.8-fold,over
R5429 T7275 T7273 arg2Of cells,over
R5430 T7275 T7274 arg1Of cells,resting
R5431 T7275 T7276 arg1Of cells,","
R5432 T7278 T7276 arg2Of panel,","
R5433 T7278 T7277 arg1Of panel,lower
R5434 T7279 T7271 arg3Of ),(
R5435 T7281 T7250 arg1Of and,As
R5436 T7281 T7259 arg1Of and,","
R5437 T7281 T7280 arg1Of and,","
R5438 T7283 T7281 arg2Of returned,and
R5439 T7283 T7282 arg1Of returned,then
R5440 T7283 T7284 arg1Of returned,to
R5441 T7283 T7287 arg1Of returned,by
R5442 T7286 T7284 arg2Of levels,to
R5443 T7286 T7285 arg1Of levels,basal
R5444 T7289 T7287 arg2Of minutes,by
R5445 T7289 T7288 arg1Of minutes,15
R5446 T7291 T7290 arg1Of effect,This
R5447 T7291 T7292 arg1Of effect,was
R5448 T7291 T7294 arg2Of effect,seen
R5449 T7294 T7292 arg2Of seen,was
R5450 T7294 T7293 arg1Of seen,not
R5451 T7294 T7295 arg1Of seen,in
R5452 T7294 T7298 arg1Of seen,when
R5453 T7297 T7295 arg2Of monocytes,in
R5454 T7297 T7296 arg1Of monocytes,M-CSF-stimulated
R5455 T7300 T7299 arg1Of antibodies,isogenic
R5456 T7300 T7301 arg1Of antibodies,(
R5457 T7300 T7304 arg1Of antibodies,were
R5458 T7300 T7305 arg2Of antibodies,used
R5459 T7302 T7301 arg2Of IgG,(
R5460 T7303 T7301 arg3Of ),(
R5461 T7305 T7298 arg2Of used,when
R5462 T7305 T7304 arg2Of used,were
R5463 T7305 T7306 arg1Of used,for
R5464 T7307 T7306 arg2Of immunoprecipitation,for
R5465 T7309 T7308 arg1Of blots,Western
R5466 T7309 T7310 arg1Of blots,of
R5467 T7309 T7318 arg1Of blots,demonstrated
R5468 T7312 T7310 arg2Of samples,of
R5469 T7312 T7311 arg1Of samples,identical
R5470 T7312 T7313 arg1Of samples,using
R5471 T7317 T7313 arg2Of PKCα,using
R5472 T7317 T7314 arg1Of PKCα,an
R5473 T7317 T7315 arg1Of PKCα,antibody
R5474 T7317 T7316 arg1Of PKCα,recognizing
R5475 T7321 T7320 arg1Of amounts,equal
R5476 T7321 T7322 arg1Of amounts,of
R5477 T7321 T7324 arg1Of amounts,were
R5478 T7321 T7325 arg2Of amounts,assayed
R5479 T7323 T7322 arg2Of PKCα,of
R5480 T7325 T7318 arg2Of assayed,demonstrated
R5481 T7325 T7319 arg1Of assayed,that
R5482 T7325 T7324 arg2Of assayed,were
R5483 T7325 T7326 arg1Of assayed,(
R5484 T7327 T7326 arg2Of Figure,(
R5485 T7327 T7328 arg1Of Figure,4
R5486 T7327 T7329 arg1Of Figure,","
R5487 T7331 T7329 arg2Of panel,","
R5488 T7331 T7330 arg1Of panel,middle
R5489 T7332 T7326 arg3Of ),(
R18506 T24238 T24239 arg1Of M-CSF,activates
R18507 T24240 T24239 arg2Of PKCα,activates
R18508 T24240 T24241 arg1Of PKCα,in
R18509 T24243 T24241 arg2Of MDMs,in
R18510 T24243 T24242 arg1Of MDMs,human
R18511 T24244 T24245 arg2Of MDMs,treated
R18512 T24244 T24257 arg1Of MDMs,were
R18513 T24244 T24258 arg2Of MDMs,lysed
R18514 T24244 T24260 arg2Of MDMs,immunoprecipitated
R18515 T24244 T24261 arg1Of MDMs,using
R18516 T24245 T24246 arg1Of treated,with
R18517 T24247 T24246 arg2Of M-CSF,with
R18518 T24247 T24248 arg1Of M-CSF,(
R18519 T24247 T24252 arg1Of M-CSF,for
R18520 T24250 T24248 arg2Of ng/ml,(
R18521 T24250 T24249 arg1Of ng/ml,100
R18522 T24251 T24248 arg3Of ),(
R18523 T24254 T24252 arg2Of amounts,for
R18524 T24254 T24253 arg1Of amounts,varying
R18525 T24254 T24255 arg1Of amounts,of
R18526 T24256 T24255 arg2Of time,of
R18527 T24258 T24259 arg1Of lysed,and
R18528 T24259 T24257 arg2Of and,were
R18529 T24260 T24259 arg2Of immunoprecipitated,and
R18530 T24261 T24260 arg3Of using,immunoprecipitated
R18531 T24263 T24262 arg1Of antibody,anti-PKC
R18532 T24263 T24264 arg1Of antibody,or
R18533 T24264 T24261 arg2Of or,using
R18534 T24267 T24264 arg2Of antibody,or
R18535 T24267 T24265 arg1Of antibody,control
R18536 T24267 T24266 arg1Of antibody,IgG
R18537 T24269 T24268 arg1Of half,One
R18538 T24269 T24270 arg1Of half,of
R18539 T24269 T24273 arg1Of half,was
R18540 T24269 T24274 arg2Of half,used
R18541 T24272 T24270 arg2Of samples,of
R18542 T24272 T24271 arg1Of samples,the
R18543 T24274 T24273 arg2Of used,was
R18544 T24276 T24274 arg3Of analyze,used
R18545 T24276 T24275 arg1Of analyze,to
R18546 T24279 T24276 arg2Of activity,analyze
R18547 T24279 T24277 arg1Of activity,PKC
R18548 T24279 T24278 arg1Of activity,kinase
R18549 T24279 T24280 arg1Of activity,using
R18550 T24282 T24280 arg2Of fluorescein,using
R18551 T24282 T24281 arg1Of fluorescein,a
R18552 T24282 T24283 arg2Of fluorescein,tagged
R18553 T24282 T24286 arg2Of fluorescein,visualized
R18554 T24283 T24285 arg1Of tagged,and
R18555 T24284 T24283 arg3Of peptide,tagged
R18556 T24285 T24295 arg1Of and,","
R18557 T24285 T24296 arg1Of and,while
R18558 T24286 T24285 arg2Of visualized,and
R18559 T24290 T24286 arg1Of electrophoresis,visualized
R18560 T24290 T24287 arg2Of electrophoresis,by
R18561 T24290 T24288 arg1Of electrophoresis,agarose
R18562 T24290 T24289 arg1Of electrophoresis,gel
R18563 T24290 T24291 arg1Of electrophoresis,(
R18564 T24293 T24291 arg2Of panel,(
R18565 T24293 T24292 arg1Of panel,top
R18566 T24294 T24291 arg3Of ),(
R18567 T24299 T24297 arg1Of half,the
R18568 T24299 T24298 arg1Of half,other
R18569 T24299 T24300 arg1Of half,was
R18570 T24299 T24301 arg2Of half,subjected
R18571 T24301 T24296 arg2Of subjected,while
R18572 T24301 T24300 arg2Of subjected,was
R18573 T24301 T24302 arg1Of subjected,to
R18574 T24301 T24306 modOf subjected,to
R18575 T24305 T24302 arg2Of analysis,to
R18576 T24305 T24303 arg1Of analysis,Western
R18577 T24305 T24304 arg1Of analysis,blot
R18578 T24307 T24306 arg1Of confirm,to
R18579 T24309 T24308 arg1Of amounts,equal
R18580 T24309 T24310 arg1Of amounts,of
R18581 T24309 T24312 arg1Of amounts,were
R18582 T24309 T24313 arg2Of amounts,immunoprecipitated
R18583 T24311 T24310 arg2Of PKCα,of
R18584 T24313 T24307 arg2Of immunoprecipitated,confirm
R18585 T24313 T24312 arg2Of immunoprecipitated,were
R18586 T24313 T24314 arg1Of immunoprecipitated,from
R18587 T24316 T24314 arg2Of sample,from
R18588 T24316 T24315 arg1Of sample,each
R18589 T24316 T24317 arg1Of sample,(
R18590 T24319 T24317 arg2Of panel,(
R18591 T24319 T24318 arg1Of panel,middle
R18592 T24320 T24317 arg3Of ),(
R18593 T24323 T24321 arg1Of assay,The
R18594 T24323 T24322 arg1Of assay,kinase
R18595 T24323 T24324 arg1Of assay,was
R18596 T24323 T24325 arg2Of assay,quantitated
R18597 T24325 T24324 arg2Of quantitated,was
R18598 T24326 T24325 arg3Of using,quantitated
R18599 T24329 T24326 arg2Of software,using
R18600 T24329 T24327 arg1Of software,Quantity
R18601 T24329 T24328 arg1Of software,One
R18602 T24329 T24330 arg1Of software,(
R18603 T24329 T24333 arg1Of software,(
R18604 T24331 T24330 arg2Of Bio-Rad,(
R18605 T24332 T24330 arg3Of ),(
R18606 T24335 T24333 arg2Of panel,(
R18607 T24335 T24334 arg1Of panel,bottom
R18608 T24336 T24333 arg3Of ),(
R18609 T24337 T24338 arg1Of Data,represents
R18610 T24338 T24349 arg1Of represents,compared
R18611 T24342 T24338 arg2Of increase,represents
R18612 T24342 T24339 arg1Of increase,the
R18613 T24342 T24340 arg1Of increase,average
R18614 T24342 T24341 arg1Of increase,fold
R18615 T24342 T24343 arg1Of increase,of
R18616 T24342 T24346 arg1Of increase,in
R18617 T24345 T24343 arg2Of activity,of
R18618 T24345 T24344 arg1Of activity,PKCα
R18619 T24348 T24346 arg2Of samples,in
R18620 T24348 T24347 arg1Of samples,non-stimulated
R18621 T24350 T24349 arg2Of to,compared
R18622 T24354 T24350 arg2Of S.E.M,to
R18623 T24354 T24351 arg1Of S.E.M,M-CSF-treated
R18624 T24354 T24352 arg1Of S.E.M,MDM
R18625 T24354 T24353 arg1Of S.E.M,±
R18626 T24354 T24355 arg1Of S.E.M,for
R18627 T24358 T24355 arg2Of experiments,for
R18628 T24358 T24356 arg1Of experiments,three
R18629 T24358 T24357 arg1Of experiments,independent
R18630 T24359 T24360 arg1Of NS,:
R18631 T24359 T24361 arg1Of NS,non-stimulated.
R18632 T24359 T24371 modOf NS,were
R18633 T24364 T24362 arg1Of p-values,*
R18634 T24364 T24363 arg1Of p-values,The
R18635 T24364 T24365 arg1Of p-values,of
R18636 T24364 T24371 arg1Of p-values,were
R18637 T24364 T24372 arg1Of p-values,≤0.05
R18638 T24366 T24365 arg2Of M-CSF,of
R18639 T24366 T24367 arg2Of M-CSF,stimulated
R18640 T24367 T24368 arg1Of stimulated,compared
R18641 T24369 T24368 arg2Of to,compared
R18642 T24370 T24369 arg2Of non-stimulated,to
R18643 T24372 T24371 arg2Of ≤0.05,were

sentences

Id Subject Object Predicate Lexical cue
T7008 0-34 Sentence denotes M-CSF-Induces PKCα Kinase Activity
T7009 35-271 Sentence denotes Since our data suggested that conventional PKCs were involved in activating NF-κB in response to M-CSF in primary human macrophages, we next investigated whether the conventional PKC, PKCα was a downstream target of M-CSF in human MDMs.
T7010 272-449 Sentence denotes PKCα was immunoprecipitated from human MDMs at the indicated time points (Figure 4), and then a PKC kinase assay was performed using a fluorescein-tagged peptide as a substrate.
T7011 450-662 Sentence denotes As shown in Figure 4 (upper panel), the peptide substrate was maximally phosphorylated within 10 minutes of stimulation (1.8-fold over resting cells, lower panel), and then returned to basal levels by 15 minutes.
T7012 663-783 Sentence denotes This effect was not seen in M-CSF-stimulated monocytes when isogenic antibodies (IgG) were used for immunoprecipitation.
T7013 784-932 Sentence denotes Western blots of identical samples using an antibody recognizing PKCα demonstrated that equal amounts of PKCα were assayed (Figure 4, middle panel).
T24089 977-1012 Sentence denotes M-CSF activates PKCα in human MDMs.
T24090 1013-1159 Sentence denotes MDMs treated with M-CSF (100 ng/ml) for varying amounts of time were lysed and immunoprecipitated using anti-PKC antibody or control IgG antibody.
T24091 1160-1467 Sentence denotes One half of the samples was used to analyze PKC kinase activity using a fluorescein tagged peptide and visualized by agarose gel electrophoresis (top panel), while the other half was subjected to Western blot analysis to confirm equal amounts of PKCα were immunoprecipitated from each sample (middle panel).
T24092 1468-1554 Sentence denotes The kinase assay was quantitated using Quantity One software (Bio-Rad) (bottom panel).
T24093 1555-1712 Sentence denotes Data represents the average fold increase of PKCα activity in non-stimulated samples compared to M-CSF-treated MDM ± S.E.M for three independent experiments.
T24094 1713-1806 Sentence denotes NS: non-stimulated. * The p-values of M-CSF stimulated compared to non-stimulated were ≤0.05.
T116 0-34 Sentence denotes M-CSF-Induces PKCα Kinase Activity
T117 35-271 Sentence denotes Since our data suggested that conventional PKCs were involved in activating NF-κB in response to M-CSF in primary human macrophages, we next investigated whether the conventional PKC, PKCα was a downstream target of M-CSF in human MDMs.
T118 272-449 Sentence denotes PKCα was immunoprecipitated from human MDMs at the indicated time points (Figure 4), and then a PKC kinase assay was performed using a fluorescein-tagged peptide as a substrate.
T119 450-662 Sentence denotes As shown in Figure 4 (upper panel), the peptide substrate was maximally phosphorylated within 10 minutes of stimulation (1.8-fold over resting cells, lower panel), and then returned to basal levels by 15 minutes.
T120 663-783 Sentence denotes This effect was not seen in M-CSF-stimulated monocytes when isogenic antibodies (IgG) were used for immunoprecipitation.
T121 784-932 Sentence denotes Western blots of identical samples using an antibody recognizing PKCα demonstrated that equal amounts of PKCα were assayed (Figure 4, middle panel).
T122 933-1012 Sentence denotes 10.1371/journal.pone.0028081.g004 Figure 4 M-CSF activates PKCα in human MDMs.
T123 1013-1159 Sentence denotes MDMs treated with M-CSF (100 ng/ml) for varying amounts of time were lysed and immunoprecipitated using anti-PKC antibody or control IgG antibody.
T124 1160-1467 Sentence denotes One half of the samples was used to analyze PKC kinase activity using a fluorescein tagged peptide and visualized by agarose gel electrophoresis (top panel), while the other half was subjected to Western blot analysis to confirm equal amounts of PKCα were immunoprecipitated from each sample (middle panel).
T125 1468-1554 Sentence denotes The kinase assay was quantitated using Quantity One software (Bio-Rad) (bottom panel).
T126 1555-1712 Sentence denotes Data represents the average fold increase of PKCα activity in non-stimulated samples compared to M-CSF-treated MDM ± S.E.M for three independent experiments.
T127 1713-1806 Sentence denotes NS: non-stimulated. * The p-values of M-CSF stimulated compared to non-stimulated were ≤0.05.

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7014 0-13 NNS denotes M-CSF-Induces
T7015 14-18 NNP denotes PKCα
T7016 19-25 NNP denotes Kinase
T7017 26-34 NNP denotes Activity
T7018 35-40 IN denotes Since
T7019 41-44 PRP$ denotes our
T7020 45-49 NNS denotes data
T7021 50-59 VBD denotes suggested
T7022 60-64 IN denotes that
T7023 65-77 JJ denotes conventional
T7024 78-82 NNS denotes PKCs
T7025 83-87 VBD denotes were
T7026 88-96 VBN denotes involved
T7027 97-99 IN denotes in
T7028 100-110 VBG denotes activating
T7029 111-116 NN denotes NF-κB
T7030 117-119 IN denotes in
T7031 120-128 NN denotes response
T7032 129-131 TO denotes to
T7033 132-137 NNP denotes M-CSF
T7034 138-140 IN denotes in
T7035 141-148 JJ denotes primary
T7036 149-154 JJ denotes human
T7037 155-166 NNS denotes macrophages
T7038 166-167 , denotes ,
T7039 168-170 PRP denotes we
T7040 171-175 JJ denotes next
T7041 176-188 VBD denotes investigated
T7042 189-196 IN denotes whether
T7043 197-200 DT denotes the
T7044 201-213 JJ denotes conventional
T7045 214-217 NNP denotes PKC
T7046 217-218 , denotes ,
T7047 219-223 NNP denotes PKCα
T7048 224-227 VBD denotes was
T7049 228-229 DT denotes a
T7050 230-240 JJ denotes downstream
T7051 241-247 NN denotes target
T7052 248-250 IN denotes of
T7053 251-256 NNP denotes M-CSF
T7054 257-259 IN denotes in
T7055 260-265 JJ denotes human
T7056 266-270 NNS denotes MDMs
T7057 270-271 . denotes .
T7058 272-276 NNP denotes PKCα
T7059 277-280 VBD denotes was
T7060 281-299 VBN denotes immunoprecipitated
T7061 300-304 IN denotes from
T7062 305-310 JJ denotes human
T7063 311-315 NNS denotes MDMs
T7064 316-318 IN denotes at
T7065 319-322 DT denotes the
T7066 323-332 JJ denotes indicated
T7067 333-337 NN denotes time
T7068 338-344 NNS denotes points
T7069 345-346 -LRB- denotes (
T7070 346-352 NN denotes Figure
T7071 353-354 CD denotes 4
T7072 354-355 -RRB- denotes )
T7073 355-356 , denotes ,
T7074 357-360 CC denotes and
T7075 361-365 RB denotes then
T7076 366-367 DT denotes a
T7077 368-371 NNP denotes PKC
T7078 372-378 NN denotes kinase
T7079 379-384 NN denotes assay
T7080 385-388 VBD denotes was
T7081 389-398 VBN denotes performed
T7082 399-404 VBG denotes using
T7083 405-406 DT denotes a
T7084 407-425 JJ denotes fluorescein-tagged
T7085 426-433 NN denotes peptide
T7086 434-436 IN denotes as
T7087 437-438 DT denotes a
T7088 439-448 NN denotes substrate
T7089 448-449 . denotes .
T7090 450-452 IN denotes As
T7091 453-458 VBN denotes shown
T7092 459-461 IN denotes in
T7093 462-468 NN denotes Figure
T7094 469-470 CD denotes 4
T7095 471-472 -LRB- denotes (
T7096 472-477 JJ denotes upper
T7097 478-483 NN denotes panel
T7098 483-484 -RRB- denotes )
T7099 484-485 , denotes ,
T7100 486-489 DT denotes the
T7101 490-497 NN denotes peptide
T7102 498-507 NN denotes substrate
T7103 508-511 VBD denotes was
T7104 512-521 RB denotes maximally
T7105 522-536 VBN denotes phosphorylated
T7106 537-543 IN denotes within
T7107 544-546 CD denotes 10
T7108 547-554 NNS denotes minutes
T7109 555-557 IN denotes of
T7110 558-569 NN denotes stimulation
T7111 570-571 -LRB- denotes (
T7112 571-579 JJ denotes 1.8-fold
T7113 580-584 IN denotes over
T7114 585-592 VBG denotes resting
T7115 593-598 NNS denotes cells
T7116 598-599 , denotes ,
T7117 600-605 JJR denotes lower
T7118 606-611 NN denotes panel
T7119 611-612 -RRB- denotes )
T7120 612-613 , denotes ,
T7121 614-617 CC denotes and
T7122 618-622 RB denotes then
T7123 623-631 VBD denotes returned
T7124 632-634 TO denotes to
T7125 635-640 JJ denotes basal
T7126 641-647 NNS denotes levels
T7127 648-650 IN denotes by
T7128 651-653 CD denotes 15
T7129 654-661 NNS denotes minutes
T7130 661-662 . denotes .
T7131 663-667 DT denotes This
T7132 668-674 NN denotes effect
T7133 675-678 VBD denotes was
T7134 679-682 RB denotes not
T7135 683-687 VBN denotes seen
T7136 688-690 IN denotes in
T7137 691-707 JJ denotes M-CSF-stimulated
T7138 708-717 NNS denotes monocytes
T7139 718-722 WRB denotes when
T7140 723-731 JJ denotes isogenic
T7141 732-742 NNS denotes antibodies
T7142 743-744 -LRB- denotes (
T7143 744-747 NNP denotes IgG
T7144 747-748 -RRB- denotes )
T7145 749-753 VBD denotes were
T7146 754-758 VBN denotes used
T7147 759-762 IN denotes for
T7148 763-782 NN denotes immunoprecipitation
T7149 782-783 . denotes .
T7150 784-791 JJ denotes Western
T7151 792-797 NNS denotes blots
T7152 798-800 IN denotes of
T7153 801-810 JJ denotes identical
T7154 811-818 NNS denotes samples
T7155 819-824 VBG denotes using
T7156 825-827 DT denotes an
T7157 828-836 NN denotes antibody
T7158 837-848 VBG denotes recognizing
T7159 849-853 NNP denotes PKCα
T7160 854-866 VBD denotes demonstrated
T7161 867-871 IN denotes that
T7162 872-877 JJ denotes equal
T7163 878-885 NNS denotes amounts
T7164 886-888 IN denotes of
T7165 889-893 NNP denotes PKCα
T7166 894-898 VBD denotes were
T7167 899-906 VBN denotes assayed
T7168 907-908 -LRB- denotes (
T7169 908-914 NN denotes Figure
T7170 915-916 CD denotes 4
T7171 916-917 , denotes ,
T7172 918-924 JJ denotes middle
T7173 925-930 NN denotes panel
T7174 930-931 -RRB- denotes )
T7175 931-932 . denotes .
T24095 977-982 NNP denotes M-CSF
T24096 983-992 VBZ denotes activates
T24097 993-997 NNP denotes PKCα
T24098 998-1000 IN denotes in
T24099 1001-1006 JJ denotes human
T24100 1007-1011 NNS denotes MDMs
T24101 1011-1012 . denotes .
T24102 1013-1017 NNS denotes MDMs
T24103 1018-1025 VBN denotes treated
T24104 1026-1030 IN denotes with
T24105 1031-1036 NNP denotes M-CSF
T24106 1037-1038 -LRB- denotes (
T24107 1038-1041 CD denotes 100
T24108 1042-1047 NN denotes ng/ml
T24109 1047-1048 -RRB- denotes )
T24110 1049-1052 IN denotes for
T24111 1053-1060 VBG denotes varying
T24112 1061-1068 NNS denotes amounts
T24113 1069-1071 IN denotes of
T24114 1072-1076 NN denotes time
T24115 1077-1081 VBD denotes were
T24116 1082-1087 VBN denotes lysed
T24117 1088-1091 CC denotes and
T24118 1092-1110 VBN denotes immunoprecipitated
T24119 1111-1116 VBG denotes using
T24120 1117-1125 JJ denotes anti-PKC
T24121 1126-1134 NN denotes antibody
T24122 1135-1137 CC denotes or
T24123 1138-1145 NN denotes control
T24124 1146-1149 NNP denotes IgG
T24125 1150-1158 NN denotes antibody
T24126 1158-1159 . denotes .
T24127 1160-1163 CD denotes One
T24128 1164-1168 NN denotes half
T24129 1169-1171 IN denotes of
T24130 1172-1175 DT denotes the
T24131 1176-1183 NNS denotes samples
T24132 1184-1187 VBD denotes was
T24133 1188-1192 VBN denotes used
T24134 1193-1195 TO denotes to
T24135 1196-1203 VB denotes analyze
T24136 1204-1207 NNP denotes PKC
T24137 1208-1214 NN denotes kinase
T24138 1215-1223 NN denotes activity
T24139 1224-1229 VBG denotes using
T24140 1230-1231 DT denotes a
T24141 1232-1243 NN denotes fluorescein
T24142 1244-1250 VBD denotes tagged
T24143 1251-1258 NN denotes peptide
T24144 1259-1262 CC denotes and
T24145 1263-1273 VBN denotes visualized
T24146 1274-1276 IN denotes by
T24147 1277-1284 JJ denotes agarose
T24148 1285-1288 NN denotes gel
T24149 1289-1304 NN denotes electrophoresis
T24150 1305-1306 -LRB- denotes (
T24151 1306-1309 JJ denotes top
T24152 1310-1315 NN denotes panel
T24153 1315-1316 -RRB- denotes )
T24154 1316-1317 , denotes ,
T24155 1318-1323 IN denotes while
T24156 1324-1327 DT denotes the
T24157 1328-1333 JJ denotes other
T24158 1334-1338 NN denotes half
T24159 1339-1342 VBD denotes was
T24160 1343-1352 VBN denotes subjected
T24161 1353-1355 TO denotes to
T24162 1356-1363 JJ denotes Western
T24163 1364-1368 NN denotes blot
T24164 1369-1377 NN denotes analysis
T24165 1378-1380 TO denotes to
T24166 1381-1388 VB denotes confirm
T24167 1389-1394 JJ denotes equal
T24168 1395-1402 NNS denotes amounts
T24169 1403-1405 IN denotes of
T24170 1406-1410 NNP denotes PKCα
T24171 1411-1415 VBD denotes were
T24172 1416-1434 VBN denotes immunoprecipitated
T24173 1435-1439 IN denotes from
T24174 1440-1444 DT denotes each
T24175 1445-1451 NN denotes sample
T24176 1452-1453 -LRB- denotes (
T24177 1453-1459 JJ denotes middle
T24178 1460-1465 NN denotes panel
T24179 1465-1466 -RRB- denotes )
T24180 1466-1467 . denotes .
T24181 1468-1471 DT denotes The
T24182 1472-1478 NN denotes kinase
T24183 1479-1484 NN denotes assay
T24184 1485-1488 VBD denotes was
T24185 1489-1500 VBN denotes quantitated
T24186 1501-1506 VBG denotes using
T24187 1507-1515 NNP denotes Quantity
T24188 1516-1519 CD denotes One
T24189 1520-1528 NN denotes software
T24190 1529-1530 -LRB- denotes (
T24191 1530-1537 NNP denotes Bio-Rad
T24192 1537-1538 -RRB- denotes )
T24193 1539-1540 -LRB- denotes (
T24194 1540-1546 JJ denotes bottom
T24195 1547-1552 NN denotes panel
T24196 1552-1553 -RRB- denotes )
T24197 1553-1554 . denotes .
T24198 1555-1559 NNP denotes Data
T24199 1560-1570 VBZ denotes represents
T24200 1571-1574 DT denotes the
T24201 1575-1582 JJ denotes average
T24202 1583-1587 VBP denotes fold
T24203 1588-1596 NN denotes increase
T24204 1597-1599 IN denotes of
T24205 1600-1604 NN denotes PKCα
T24206 1605-1613 NN denotes activity
T24207 1614-1616 IN denotes in
T24208 1617-1631 JJ denotes non-stimulated
T24209 1632-1639 NNS denotes samples
T24210 1640-1648 VBN denotes compared
T24211 1649-1651 TO denotes to
T24212 1652-1665 JJ denotes M-CSF-treated
T24213 1666-1669 NNP denotes MDM
T24214 1670-1671 NN denotes ±
T24215 1672-1677 NNP denotes S.E.M
T24216 1678-1681 IN denotes for
T24217 1682-1687 CD denotes three
T24218 1688-1699 JJ denotes independent
T24219 1700-1711 NNS denotes experiments
T24220 1711-1712 . denotes .
T24221 1713-1715 NNP denotes NS
T24222 1715-1716 : denotes :
T24223 1717-1731 JJ denotes non-stimulated
T24224 1731-1732 . denotes .
T24225 1733-1734 SYM denotes *
T24226 1735-1738 DT denotes The
T24227 1739-1747 NNS denotes p-values
T24228 1748-1750 IN denotes of
T24229 1751-1756 NNP denotes M-CSF
T24230 1757-1767 VBD denotes stimulated
T24231 1768-1776 VBN denotes compared
T24232 1777-1779 TO denotes to
T24233 1780-1794 JJ denotes non-stimulated
T24234 1795-1799 VBD denotes were
T24235 1800-1801 CD denotes
T24236 1801-1805 CD denotes 0.05
T24237 1805-1806 . denotes .
R5169 T7014 T7017 compound M-CSF-Induces,Activity
R5170 T7015 T7017 compound PKCα,Activity
R5171 T7016 T7017 compound Kinase,Activity
R5172 T7017 T7021 nsubj Activity,suggested
R5173 T7018 T7021 mark Since,suggested
R5174 T7019 T7020 poss our,data
R5175 T7020 T7021 nsubj data,suggested
R5176 T7021 T7041 advcl suggested,investigated
R5177 T7022 T7026 mark that,involved
R5178 T7023 T7024 amod conventional,PKCs
R5179 T7024 T7026 nsubjpass PKCs,involved
R5180 T7025 T7026 auxpass were,involved
R5181 T7026 T7021 ccomp involved,suggested
R5182 T7027 T7026 prep in,involved
R5183 T7028 T7027 pcomp activating,in
R5184 T7029 T7028 dobj NF-κB,activating
R5185 T7030 T7028 prep in,activating
R5186 T7031 T7030 pobj response,in
R5187 T7032 T7031 prep to,response
R5188 T7033 T7032 pobj M-CSF,to
R5189 T7034 T7033 prep in,M-CSF
R5190 T7035 T7037 amod primary,macrophages
R5191 T7036 T7037 amod human,macrophages
R5192 T7037 T7034 pobj macrophages,in
R5193 T7038 T7041 punct ",",investigated
R5194 T7039 T7041 nsubj we,investigated
R5195 T7040 T7041 advmod next,investigated
R5196 T7041 T7041 ROOT investigated,investigated
R5197 T7042 T7048 mark whether,was
R5198 T7043 T7045 det the,PKC
R5199 T7044 T7045 amod conventional,PKC
R5200 T7045 T7048 nsubj PKC,was
R5201 T7046 T7048 punct ",",was
R5202 T7047 T7048 nsubj PKCα,was
R5203 T7048 T7041 ccomp was,investigated
R5204 T7049 T7051 det a,target
R5205 T7050 T7051 amod downstream,target
R5206 T7051 T7048 attr target,was
R5207 T7052 T7051 prep of,target
R5208 T7053 T7052 pobj M-CSF,of
R5209 T7054 T7051 prep in,target
R5210 T7055 T7056 amod human,MDMs
R5211 T7056 T7054 pobj MDMs,in
R5212 T7057 T7041 punct .,investigated
R5213 T7058 T7060 nsubjpass PKCα,immunoprecipitated
R5214 T7059 T7060 auxpass was,immunoprecipitated
R5215 T7060 T7060 ROOT immunoprecipitated,immunoprecipitated
R5216 T7061 T7060 prep from,immunoprecipitated
R5217 T7062 T7063 amod human,MDMs
R5218 T7063 T7061 pobj MDMs,from
R5219 T7064 T7060 prep at,immunoprecipitated
R5220 T7065 T7067 det the,time
R5221 T7066 T7067 amod indicated,time
R5222 T7067 T7064 pobj time,at
R5223 T7068 T7081 advmod points,performed
R5224 T7069 T7070 punct (,Figure
R5225 T7070 T7068 appos Figure,points
R5226 T7071 T7070 nummod 4,Figure
R5227 T7072 T7070 punct ),Figure
R5228 T7073 T7070 punct ",",Figure
R5229 T7074 T7070 cc and,Figure
R5230 T7075 T7081 advmod then,performed
R5231 T7076 T7079 det a,assay
R5232 T7077 T7079 compound PKC,assay
R5233 T7078 T7079 compound kinase,assay
R5234 T7079 T7081 nsubjpass assay,performed
R5235 T7080 T7081 auxpass was,performed
R5236 T7081 T7081 ROOT performed,performed
R5237 T7082 T7081 advcl using,performed
R5238 T7083 T7085 det a,peptide
R5239 T7084 T7085 amod fluorescein-tagged,peptide
R5240 T7085 T7082 dobj peptide,using
R5241 T7086 T7082 prep as,using
R5242 T7087 T7088 det a,substrate
R5243 T7088 T7086 pobj substrate,as
R5244 T7089 T7081 punct .,performed
R5245 T7090 T7091 mark As,shown
R5246 T7091 T7103 advcl shown,was
R5247 T7092 T7091 prep in,shown
R5248 T7093 T7092 pobj Figure,in
R5249 T7094 T7093 nummod 4,Figure
R5250 T7095 T7097 punct (,panel
R5251 T7096 T7097 amod upper,panel
R5252 T7097 T7093 appos panel,Figure
R5253 T7098 T7093 punct ),Figure
R5254 T7099 T7103 punct ",",was
R5255 T7100 T7102 det the,substrate
R5256 T7101 T7102 compound peptide,substrate
R5257 T7102 T7103 nsubj substrate,was
R5258 T7103 T7103 ROOT was,was
R5259 T7104 T7105 advmod maximally,phosphorylated
R5260 T7105 T7103 acomp phosphorylated,was
R5261 T7106 T7105 prep within,phosphorylated
R5262 T7107 T7108 nummod 10,minutes
R5263 T7108 T7106 pobj minutes,within
R5264 T7109 T7108 prep of,minutes
R5265 T7110 T7109 pobj stimulation,of
R5266 T7111 T7112 punct (,1.8-fold
R5267 T7112 T7105 appos 1.8-fold,phosphorylated
R5268 T7113 T7112 prep over,1.8-fold
R5269 T7114 T7115 amod resting,cells
R5270 T7115 T7113 pobj cells,over
R5271 T7116 T7112 punct ",",1.8-fold
R5272 T7117 T7118 amod lower,panel
R5273 T7118 T7112 appos panel,1.8-fold
R5274 T7119 T7112 punct ),1.8-fold
R5275 T7120 T7112 punct ",",1.8-fold
R5276 T7121 T7105 cc and,phosphorylated
R5277 T7122 T7123 advmod then,returned
R5278 T7123 T7103 conj returned,was
R5279 T7124 T7123 prep to,returned
R5280 T7125 T7126 amod basal,levels
R5281 T7126 T7124 pobj levels,to
R5282 T7127 T7123 prep by,returned
R5283 T7128 T7129 nummod 15,minutes
R5284 T7129 T7127 pobj minutes,by
R5285 T7130 T7123 punct .,returned
R5286 T7131 T7132 det This,effect
R5287 T7132 T7135 nsubjpass effect,seen
R5288 T7133 T7135 auxpass was,seen
R5289 T7134 T7135 neg not,seen
R5290 T7135 T7135 ROOT seen,seen
R5291 T7136 T7135 prep in,seen
R5292 T7137 T7138 amod M-CSF-stimulated,monocytes
R5293 T7138 T7136 pobj monocytes,in
R5294 T7139 T7146 advmod when,used
R5295 T7140 T7141 amod isogenic,antibodies
R5296 T7141 T7146 nsubjpass antibodies,used
R5297 T7142 T7143 punct (,IgG
R5298 T7143 T7141 appos IgG,antibodies
R5299 T7144 T7141 punct ),antibodies
R5300 T7145 T7146 auxpass were,used
R5301 T7146 T7135 advcl used,seen
R5302 T7147 T7146 prep for,used
R5303 T7148 T7147 pobj immunoprecipitation,for
R5304 T7149 T7135 punct .,seen
R5305 T7150 T7151 amod Western,blots
R5306 T7151 T7160 nsubj blots,demonstrated
R5307 T7152 T7151 prep of,blots
R5308 T7153 T7154 amod identical,samples
R5309 T7154 T7152 pobj samples,of
R5310 T7155 T7151 acl using,blots
R5311 T7156 T7157 det an,antibody
R5312 T7157 T7155 dobj antibody,using
R5313 T7158 T7155 advcl recognizing,using
R5314 T7159 T7160 nsubj PKCα,demonstrated
R5315 T7160 T7160 ROOT demonstrated,demonstrated
R5316 T7161 T7167 mark that,assayed
R5317 T7162 T7163 amod equal,amounts
R5318 T7163 T7167 nsubjpass amounts,assayed
R5319 T7164 T7163 prep of,amounts
R5320 T7165 T7164 pobj PKCα,of
R5321 T7166 T7167 auxpass were,assayed
R5322 T7167 T7160 ccomp assayed,demonstrated
R5323 T7168 T7169 punct (,Figure
R5324 T7169 T7167 oprd Figure,assayed
R5325 T7170 T7169 nummod 4,Figure
R5326 T7171 T7169 punct ",",Figure
R5327 T7172 T7173 amod middle,panel
R5328 T7173 T7169 appos panel,Figure
R5329 T7174 T7169 punct ),Figure
R5330 T7175 T7160 punct .,demonstrated
R18363 T24095 T24096 nsubj M-CSF,activates
R18364 T24096 T24096 ROOT activates,activates
R18365 T24097 T24096 dobj PKCα,activates
R18366 T24098 T24096 prep in,activates
R18367 T24099 T24100 amod human,MDMs
R18368 T24100 T24098 pobj MDMs,in
R18369 T24101 T24096 punct .,activates
R18370 T24102 T24116 nsubjpass MDMs,lysed
R18371 T24103 T24102 acl treated,MDMs
R18372 T24104 T24103 prep with,treated
R18373 T24105 T24104 pobj M-CSF,with
R18374 T24106 T24108 punct (,ng/ml
R18375 T24107 T24108 nummod 100,ng/ml
R18376 T24108 T24105 appos ng/ml,M-CSF
R18377 T24109 T24103 punct ),treated
R18378 T24110 T24103 prep for,treated
R18379 T24111 T24112 amod varying,amounts
R18380 T24112 T24110 pobj amounts,for
R18381 T24113 T24112 prep of,amounts
R18382 T24114 T24113 pobj time,of
R18383 T24115 T24116 auxpass were,lysed
R18384 T24116 T24116 ROOT lysed,lysed
R18385 T24117 T24116 cc and,lysed
R18386 T24118 T24116 conj immunoprecipitated,lysed
R18387 T24119 T24118 advcl using,immunoprecipitated
R18388 T24120 T24121 amod anti-PKC,antibody
R18389 T24121 T24119 dobj antibody,using
R18390 T24122 T24121 cc or,antibody
R18391 T24123 T24121 conj control,antibody
R18392 T24124 T24125 compound IgG,antibody
R18393 T24125 T24121 conj antibody,antibody
R18394 T24126 T24116 punct .,lysed
R18395 T24127 T24128 nummod One,half
R18396 T24128 T24133 nsubjpass half,used
R18397 T24129 T24128 prep of,half
R18398 T24130 T24131 det the,samples
R18399 T24131 T24129 pobj samples,of
R18400 T24132 T24133 auxpass was,used
R18401 T24133 T24133 ROOT used,used
R18402 T24134 T24135 aux to,analyze
R18403 T24135 T24133 xcomp analyze,used
R18404 T24136 T24138 compound PKC,activity
R18405 T24137 T24138 compound kinase,activity
R18406 T24138 T24135 dobj activity,analyze
R18407 T24139 T24135 advcl using,analyze
R18408 T24140 T24141 det a,fluorescein
R18409 T24141 T24139 dobj fluorescein,using
R18410 T24142 T24133 conj tagged,used
R18411 T24143 T24142 dobj peptide,tagged
R18412 T24144 T24142 cc and,tagged
R18413 T24145 T24142 conj visualized,tagged
R18414 T24146 T24145 agent by,visualized
R18415 T24147 T24149 amod agarose,electrophoresis
R18416 T24148 T24149 compound gel,electrophoresis
R18417 T24149 T24146 pobj electrophoresis,by
R18418 T24150 T24149 punct (,electrophoresis
R18419 T24151 T24152 amod top,panel
R18420 T24152 T24149 appos panel,electrophoresis
R18421 T24153 T24149 punct ),electrophoresis
R18422 T24154 T24142 punct ",",tagged
R18423 T24155 T24160 mark while,subjected
R18424 T24156 T24158 det the,half
R18425 T24157 T24158 amod other,half
R18426 T24158 T24160 nsubjpass half,subjected
R18427 T24159 T24160 auxpass was,subjected
R18428 T24160 T24142 advcl subjected,tagged
R18429 T24161 T24160 prep to,subjected
R18430 T24162 T24164 amod Western,analysis
R18431 T24163 T24164 compound blot,analysis
R18432 T24164 T24161 pobj analysis,to
R18433 T24165 T24166 aux to,confirm
R18434 T24166 T24160 xcomp confirm,subjected
R18435 T24167 T24168 amod equal,amounts
R18436 T24168 T24166 dobj amounts,confirm
R18437 T24169 T24168 prep of,amounts
R18438 T24170 T24169 pobj PKCα,of
R18439 T24171 T24172 auxpass were,immunoprecipitated
R18440 T24172 T24142 conj immunoprecipitated,tagged
R18441 T24173 T24172 prep from,immunoprecipitated
R18442 T24174 T24175 det each,sample
R18443 T24175 T24173 pobj sample,from
R18444 T24176 T24178 punct (,panel
R18445 T24177 T24178 amod middle,panel
R18446 T24178 T24175 appos panel,sample
R18447 T24179 T24172 punct ),immunoprecipitated
R18448 T24180 T24133 punct .,used
R18449 T24181 T24183 det The,assay
R18450 T24182 T24183 compound kinase,assay
R18451 T24183 T24185 nsubjpass assay,quantitated
R18452 T24184 T24185 auxpass was,quantitated
R18453 T24185 T24185 ROOT quantitated,quantitated
R18454 T24186 T24185 advcl using,quantitated
R18455 T24187 T24186 dobj Quantity,using
R18456 T24188 T24189 nummod One,software
R18457 T24189 T24195 nmod software,panel
R18458 T24190 T24191 punct (,Bio-Rad
R18459 T24191 T24189 appos Bio-Rad,software
R18460 T24192 T24189 punct ),software
R18461 T24193 T24195 punct (,panel
R18462 T24194 T24195 amod bottom,panel
R18463 T24195 T24187 appos panel,Quantity
R18464 T24196 T24187 punct ),Quantity
R18465 T24197 T24185 punct .,quantitated
R18466 T24198 T24199 nsubj Data,represents
R18467 T24199 T24199 ROOT represents,represents
R18468 T24200 T24203 det the,increase
R18469 T24201 T24202 amod average,fold
R18470 T24202 T24203 compound fold,increase
R18471 T24203 T24199 dobj increase,represents
R18472 T24204 T24203 prep of,increase
R18473 T24205 T24206 compound PKCα,activity
R18474 T24206 T24204 pobj activity,of
R18475 T24207 T24206 prep in,activity
R18476 T24208 T24209 amod non-stimulated,samples
R18477 T24209 T24207 pobj samples,in
R18478 T24210 T24199 prep compared,represents
R18479 T24211 T24210 prep to,compared
R18480 T24212 T24215 compound M-CSF-treated,S.E.M
R18481 T24213 T24214 compound MDM,±
R18482 T24214 T24215 compound ±,S.E.M
R18483 T24215 T24211 pobj S.E.M,to
R18484 T24216 T24210 prep for,compared
R18485 T24217 T24219 nummod three,experiments
R18486 T24218 T24219 amod independent,experiments
R18487 T24219 T24216 pobj experiments,for
R18488 T24220 T24199 punct .,represents
R18489 T24221 T24221 ROOT NS,NS
R18490 T24222 T24221 punct :,NS
R18491 T24223 T24221 acl non-stimulated,NS
R18492 T24224 T24221 punct .,NS
R18493 T24225 T24225 ROOT *,*
R18494 T24226 T24227 det The,p-values
R18495 T24227 T24230 nsubj p-values,stimulated
R18496 T24228 T24227 prep of,p-values
R18497 T24229 T24228 pobj M-CSF,of
R18498 T24230 T24230 ROOT stimulated,stimulated
R18499 T24231 T24230 prep compared,stimulated
R18500 T24232 T24231 prep to,compared
R18501 T24233 T24232 pobj non-stimulated,to
R18502 T24234 T24230 conj were,stimulated
R18503 T24235 T24236 compound ≤,0.05
R18504 T24236 T24234 attr 0.05,were
R18505 T24237 T24230 punct .,stimulated

test2

Id Subject Object Predicate Lexical cue Speculation
T7000 0-5 Protein denotes M-CSF true
T7001 6-13 Positive_regulation denotes Induces
T7002 14-18 Protein denotes PKCα
T7003 132-137 Protein denotes M-CSF
T7004 219-223 Protein denotes PKCα
T7005 251-256 Protein denotes M-CSF
T7006 522-536 Phosphorylation denotes phosphorylated
T7007 691-696 Protein denotes M-CSF
T24080 977-982 Protein denotes M-CSF
T24081 983-992 Positive_regulation denotes activates
T24082 993-997 Protein denotes PKCα
T24083 1031-1036 Protein denotes M-CSF
T24084 1406-1410 Protein denotes PKCα
T24085 1588-1596 Positive_regulation denotes increase
T24086 1600-1604 Protein denotes PKCα
T24087 1652-1657 Protein denotes M-CSF
T24088 1751-1756 Protein denotes M-CSF
R5168 T7000 T7001 causeOf M-CSF,Induces
R18359 T24080 T24081 causeOf M-CSF,activates
R18360 T24082 T24081 themeOf PKCα,activates
R18361 T24086 T24085 themeOf PKCα,increase
R18362 T24087 T24085 causeOf M-CSF,increase