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PMC:3245220 / 11-173 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T441 41-44 Q04206 denotes p65
T442 41-44 P21579 denotes p65
T443 123-159 P09603 denotes Macrophage colony-stimulating factor
T444 134-159 P04141 denotes colony-stimulating factor

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T467 45-60 Phosphorylation denotes Phosphorylation
T476 41-44 Protein denotes p65
T477 64-70 Entity denotes Ser276
T483 24-34 Positive_regulation denotes Activating
T484 123-159 Protein denotes Macrophage colony-stimulating factor
R401 T467 T483 themeOf Phosphorylation,Activating
R405 T477 T467 themeOf Ser276,Phosphorylation
R406 T477 T476 partOf Ser276,p65

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T729 35-40 Protein denotes NF-κB
T730 41-44 Protein denotes p65
T731 75-89 Protein denotes Protein Kinase
T732 45-60 Phosphorylation denotes Phosphorylation
T733 45-60 Phosphorylation denotes Phosphorylation
T734 90-91 Entity denotes C
T735 24-34 Positive_regulation denotes Activating
T736 24-34 Positive_regulation denotes Activating
T737 24-34 Positive_regulation denotes Activating
T738 123-159 Protein denotes Macrophage colony-stimulating factor
T18342 35-40 Protein denotes NF-κB
R515 T729 T732 themeOf NF-κB,Phosphorylation
R516 T730 T733 themeOf p65,Phosphorylation
R517 T731 T735 themeOf Protein Kinase,Activating
R518 T731 T734 partOf Protein Kinase,C
R519 T732 T736 themeOf Phosphorylation,Activating
R520 T733 T737 themeOf Phosphorylation,Activating
R521 T734 T735 Site C,Activating
R522 T734 T736 Site C,Activating
R523 T734 T737 Site C,Activating

events-check-again

Id Subject Object Predicate Lexical cue
T697 24-34 Positive_regulation denotes Activating
T698 41-44 Protein denotes p65
T699 45-60 Phosphorylation denotes Phosphorylation
T700 64-70 Entity denotes Ser276
T701 123-159 Protein denotes Macrophage colony-stimulating factor
R497 T699 T697 themeOf Phosphorylation,Activating
R498 T700 T699 themeOf Ser276,Phosphorylation
R499 T700 T698 partOf Ser276,p65

GO-BP

Id Subject Object Predicate Lexical cue
T508 45-60 http://purl.obolibrary.org/obo/GO_0016310 denotes Phosphorylation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T255 3-11 NN denotes Monocyte
T256 12-20 NN denotes Survival
T257 21-23 IN denotes by
T258 24-34 VB denotes Activating
T259 35-40 NN denotes NF-κB
T260 41-44 NN denotes p65
T261 45-60 NN denotes Phosphorylation
T262 61-63 IN denotes at
T263 64-70 NN denotes Ser276
T264 71-74 IN denotes via
T265 75-82 NN denotes Protein
T266 83-89 NN denotes Kinase
T267 90-91 NN denotes C
T268 123-133 NN denotes Macrophage
T269 134-152 JJ denotes colony-stimulating
T270 153-159 NN denotes factor
T271 160-161 -LRB- denotes (
T15740 35-40 NN denotes NF-κB
R225 T256 T255 arg1Of Survival,Monocyte
R226 T258 T257 arg2Of Activating,by
R227 T258 T262 arg1Of Activating,at
R228 T258 T264 arg1Of Activating,via
R229 T261 T258 arg2Of Phosphorylation,Activating
R230 T261 T259 arg1Of Phosphorylation,NF-κB
R231 T261 T260 arg1Of Phosphorylation,p65
R232 T263 T262 arg2Of Ser276,at
R233 T267 T264 arg2Of C,via
R234 T267 T265 arg1Of C,Protein
R235 T267 T266 arg1Of C,Kinase
R236 T270 T268 arg1Of factor,Macrophage
R237 T270 T269 arg1Of factor,colony-stimulating
R238 T270 T271 arg1Of factor,(

sentences

Id Subject Object Predicate Lexical cue
T2 114-122 Sentence denotes Abstract

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T60 3-11 NNP denotes Monocyte
T61 12-20 NNP denotes Survival
T62 21-23 IN denotes by
T63 24-34 NNP denotes Activating
T64 35-40 NNP denotes NF-κB
T65 41-44 CD denotes p65
T66 45-60 NNP denotes Phosphorylation
T67 61-63 IN denotes at
T68 64-70 NNP denotes Ser276
T69 71-74 IN denotes via
T70 75-82 NNP denotes Protein
T71 83-89 NNP denotes Kinase
T72 90-91 NNP denotes C
T73 123-133 NNP denotes Macrophage
T74 134-152 JJ denotes colony-stimulating
T75 153-159 NN denotes factor
T76 160-161 -LRB- denotes (
T14519 35-40 JJ denotes NF-κB
R28 T60 T61 compound Monocyte,Survival
R31 T63 T64 compound Activating,NF-κB
R32 T64 T62 pobj NF-κB,by
R33 T65 T66 nummod p65,Phosphorylation
R35 T67 T66 prep at,Phosphorylation
R36 T68 T67 pobj Ser276,at
R38 T70 T71 compound Protein,Kinase
R39 T71 T73 compound Kinase,Macrophage
R40 T72 T73 compound C,Macrophage
R41 T73 T75 nmod Macrophage,factor
R42 T74 T75 amod colony-stimulating,factor
R43 T75 T69 pobj factor,via
R44 T76 T75 punct (,factor

test2

Id Subject Object Predicate Lexical cue
T23 24-34 Positive_regulation denotes Activating
T24 41-44 Protein denotes p65
T25 45-60 Phosphorylation denotes Phosphorylation
T26 64-70 Entity denotes Ser276
T27 123-159 Protein denotes Macrophage colony-stimulating factor
R14 T25 T23 themeOf Phosphorylation,Activating
R15 T26 T25 themeOf Ser276,Phosphorylation
R16 T26 T24 partOf Ser276,p65