PMC:3218875 / 992-1327
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T932 | 327-330 | DT | denotes | the |
T931 | 324-326 | TO | denotes | to |
T883 | 1-11 | NN | denotes | disability |
T930 | 318-323 | VBZ | denotes | leads |
T929 | 306-317 | NNS | denotes | fibroblasts |
T928 | 297-305 | JJ | denotes | synovial |
T927 | 294-296 | IN | denotes | of |
T926 | 280-293 | NNP | denotes | Proliferation |
T925 | 278-279 | . | denotes | . |
T924 | 273-278 | NNS | denotes | cells |
T923 | 264-272 | JJ | denotes | synovial |
T922 | 260-263 | CC | denotes | and |
T921 | 250-259 | NNS | denotes | monocytes |
T920 | 237-249 | VBG | denotes | infiltrating |
T919 | 234-236 | IN | denotes | by |
T918 | 215-233 | NNS | denotes | metalloproteinases |
T917 | 208-214 | NN | denotes | matrix |
T908 | 160-163 | CC | denotes | and |
T907 | 158-159 | CD | denotes | 1 |
T906 | 153-157 | NN | denotes | type |
T905 | 144-152 | NN | denotes | T-helper |
T904 | 128-143 | JJ | denotes | proinflammatory |
T903 | 125-127 | IN | denotes | of |
T902 | 114-124 | NN | denotes | production |
T901 | 108-113 | JJ | denotes | local |
T900 | 104-107 | DT | denotes | the |
T899 | 97-103 | VBZ | denotes | drives |
T898 | 91-96 | NN | denotes | space |
T897 | 85-90 | JJ | denotes | joint |
T896 | 81-84 | DT | denotes | the |
T895 | 76-80 | IN | denotes | into |
T894 | 69-75 | NN | denotes | system |
T893 | 62-68 | JJ | denotes | immune |
T892 | 53-61 | JJ | denotes | adaptive |
T891 | 49-52 | CC | denotes | and |
T890 | 42-48 | NN | denotes | innate |
T889 | 38-41 | DT | denotes | the |
T888 | 35-37 | IN | denotes | of |
T887 | 29-34 | NNS | denotes | cells |
T886 | 26-28 | IN | denotes | of |
T885 | 13-25 | NNP | denotes | Infiltration |
T884 | 11-12 | . | denotes | . |
T916 | 204-207 | CC | denotes | and |
T915 | 202-203 | , | denotes | , |
T914 | 192-202 | NNS | denotes | chemokines |
T913 | 190-191 | , | denotes | , |
T912 | 181-190 | NNS | denotes | cytokines |
T911 | 178-180 | CD | denotes | 17 |
T910 | 173-177 | NN | denotes | type |
T909 | 164-172 | NNP | denotes | T-helper |
R695 | T885 | T899 | nsubj | Infiltration,drives |
R696 | T886 | T885 | prep | of,Infiltration |
R697 | T887 | T886 | pobj | cells,of |
R698 | T888 | T887 | prep | of,cells |
R699 | T889 | T894 | det | the,system |
R700 | T890 | T894 | amod | innate,system |
R701 | T891 | T890 | cc | and,innate |
R702 | T892 | T890 | conj | adaptive,innate |
R703 | T893 | T894 | amod | immune,system |
R704 | T894 | T888 | pobj | system,of |
R705 | T895 | T885 | prep | into,Infiltration |
R706 | T896 | T898 | det | the,space |
R707 | T897 | T898 | amod | joint,space |
R708 | T898 | T899 | nsubj | space,drives |
R709 | T899 | T899 | ROOT | drives,drives |
R710 | T900 | T902 | det | the,production |
R711 | T901 | T902 | amod | local,production |
R712 | T902 | T899 | dobj | production,drives |
R713 | T903 | T902 | prep | of,production |
R714 | T904 | T906 | amod | proinflammatory,type |
R715 | T905 | T906 | compound | T-helper,type |
R716 | T906 | T903 | pobj | type,of |
R717 | T907 | T906 | nummod | 1,type |
R718 | T908 | T906 | cc | and,type |
R719 | T909 | T910 | compound | T-helper,type |
R720 | T910 | T906 | conj | type,type |
R721 | T911 | T912 | nummod | 17,cytokines |
R722 | T912 | T906 | appos | cytokines,type |
R723 | T913 | T912 | punct | ",",cytokines |
R724 | T914 | T912 | conj | chemokines,cytokines |
R725 | T915 | T914 | punct | ",",chemokines |
R726 | T916 | T914 | cc | and,chemokines |
R727 | T917 | T918 | compound | matrix,metalloproteinases |
R728 | T918 | T914 | conj | metalloproteinases,chemokines |
R729 | T919 | T899 | prep | by,drives |
R730 | T920 | T919 | pcomp | infiltrating,by |
R731 | T921 | T920 | dobj | monocytes,infiltrating |
R732 | T922 | T921 | cc | and,monocytes |
R733 | T923 | T924 | amod | synovial,cells |
R734 | T924 | T921 | conj | cells,monocytes |
R735 | T925 | T899 | punct | .,drives |
R736 | T926 | T930 | nsubj | Proliferation,leads |
R737 | T927 | T926 | prep | of,Proliferation |
R738 | T928 | T929 | amod | synovial,fibroblasts |
R739 | T929 | T927 | pobj | fibroblasts,of |
R740 | T930 | T930 | ROOT | leads,leads |
R741 | T931 | T930 | prep | to,leads |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T471 | 327-330 | DT | denotes | the |
T470 | 324-326 | TO | denotes | to |
T469 | 318-323 | VB | denotes | leads |
T468 | 306-317 | NN | denotes | fibroblasts |
T467 | 297-305 | JJ | denotes | synovial |
T466 | 294-296 | IN | denotes | of |
T465 | 280-293 | NN | denotes | Proliferation |
T464 | 273-278 | NN | denotes | cells |
T463 | 264-272 | JJ | denotes | synovial |
T462 | 260-263 | CC | denotes | and |
T461 | 250-259 | NN | denotes | monocytes |
T460 | 237-249 | VB | denotes | infiltrating |
T459 | 234-236 | IN | denotes | by |
T458 | 215-233 | NN | denotes | metalloproteinases |
T457 | 208-214 | NN | denotes | matrix |
T456 | 204-207 | CC | denotes | and |
T455 | 202-203 | -COMMA- | denotes | , |
T454 | 192-202 | NN | denotes | chemokines |
T453 | 190-191 | -COMMA- | denotes | , |
T440 | 104-107 | DT | denotes | the |
T439 | 97-103 | VB | denotes | drives |
T438 | 91-96 | NN | denotes | space |
T437 | 85-90 | JJ | denotes | joint |
T436 | 81-84 | DT | denotes | the |
T435 | 76-80 | IN | denotes | into |
T434 | 69-75 | NN | denotes | system |
T433 | 62-68 | JJ | denotes | immune |
T432 | 53-61 | JJ | denotes | adaptive |
T431 | 49-52 | CC | denotes | and |
T430 | 42-48 | JJ | denotes | innate |
T429 | 38-41 | DT | denotes | the |
T428 | 35-37 | IN | denotes | of |
T427 | 29-34 | NN | denotes | cells |
T426 | 26-28 | IN | denotes | of |
T425 | 13-25 | NN | denotes | Infiltration |
T424 | 1-11 | NN | denotes | disability |
T452 | 181-190 | NN | denotes | cytokines |
T451 | 178-180 | CD | denotes | 17 |
T450 | 173-177 | NN | denotes | type |
T449 | 164-172 | NN | denotes | T-helper |
T448 | 160-163 | CC | denotes | and |
T447 | 158-159 | CD | denotes | 1 |
T446 | 153-157 | NN | denotes | type |
T445 | 144-152 | NN | denotes | T-helper |
T444 | 128-143 | JJ | denotes | proinflammatory |
T443 | 125-127 | IN | denotes | of |
T442 | 114-124 | NN | denotes | production |
T441 | 108-113 | JJ | denotes | local |
R285 | T425 | T426 | arg1Of | Infiltration,of |
R286 | T425 | T435 | arg1Of | Infiltration,into |
R287 | T425 | T439 | arg1Of | Infiltration,drives |
R288 | T425 | T460 | arg1Of | Infiltration,infiltrating |
R289 | T427 | T426 | arg2Of | cells,of |
R290 | T427 | T428 | arg1Of | cells,of |
R291 | T430 | T431 | arg1Of | innate,and |
R292 | T432 | T431 | arg2Of | adaptive,and |
R293 | T434 | T428 | arg2Of | system,of |
R294 | T434 | T429 | arg1Of | system,the |
R295 | T434 | T430 | arg1Of | system,innate |
R296 | T434 | T432 | arg1Of | system,adaptive |
R297 | T434 | T433 | arg1Of | system,immune |
R298 | T438 | T435 | arg2Of | space,into |
R299 | T438 | T436 | arg1Of | space,the |
R300 | T438 | T437 | arg1Of | space,joint |
R301 | T439 | T459 | arg1Of | drives,by |
R302 | T442 | T439 | arg2Of | production,drives |
R303 | T442 | T440 | arg1Of | production,the |
R304 | T442 | T441 | arg1Of | production,local |
R305 | T442 | T443 | arg1Of | production,of |
R306 | T447 | T448 | arg1Of | 1,and |
R307 | T449 | T448 | arg2Of | T-helper,and |
R308 | T452 | T444 | arg1Of | cytokines,proinflammatory |
R309 | T452 | T445 | arg1Of | cytokines,T-helper |
R310 | T452 | T446 | arg1Of | cytokines,type |
R311 | T452 | T447 | arg1Of | cytokines,1 |
R312 | T452 | T449 | arg1Of | cytokines,T-helper |
R313 | T452 | T450 | arg1Of | cytokines,type |
R314 | T452 | T451 | arg1Of | cytokines,17 |
R315 | T452 | T453 | arg1Of | cytokines,"," |
R316 | T453 | T456 | arg1Of | ",",and |
R317 | T454 | T453 | arg2Of | chemokines,"," |
R318 | T456 | T443 | arg2Of | and,of |
R319 | T456 | T455 | arg1Of | and,"," |
R320 | T458 | T456 | arg2Of | metalloproteinases,and |
R321 | T458 | T457 | arg1Of | metalloproteinases,matrix |
R322 | T460 | T459 | arg2Of | infiltrating,by |
R323 | T461 | T462 | arg1Of | monocytes,and |
R324 | T462 | T460 | arg2Of | and,infiltrating |
R325 | T464 | T462 | arg2Of | cells,and |
R326 | T464 | T463 | arg1Of | cells,synovial |
R327 | T465 | T466 | arg1Of | Proliferation,of |
R328 | T465 | T469 | arg1Of | Proliferation,leads |
R329 | T468 | T466 | arg2Of | fibroblasts,of |
R330 | T468 | T467 | arg1Of | fibroblasts,synovial |
R331 | T469 | T470 | arg1Of | leads,to |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T321 | 62-75 | http://purl.obolibrary.org/obo/UBERON_0002405 | denotes | immune system |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T778 | 273-293 | http://purl.obolibrary.org/obo/GO_0008283 | denotes | cells. Proliferation |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T812 | 273-278 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T811 | 29-34 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T326 | 13-279 | Sentence | denotes | Infiltration of cells of the innate and adaptive immune system into the joint space drives the local production of proinflammatory T-helper type 1 and T-helper type 17 cytokines, chemokines, and matrix metalloproteinases by infiltrating monocytes and synovial cells. |
T9 | 13-279 | Sentence | denotes | Infiltration of cells of the innate and adaptive immune system into the joint space drives the local production of proinflammatory T-helper type 1 and T-helper type 17 cytokines, chemokines, and matrix metalloproteinases by infiltrating monocytes and synovial cells. |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1588 | 237-278 | Binding | denotes | infiltrating monocytes and synovial cells |
T1581 | 208-233 | Protein | denotes | matrix metalloproteinases |
T1577 | 128-152 | Entity | denotes | proinflammatory T-helper |
T1574 | 250-259 | Entity | denotes | monocytes |
T1570 | 26-34 | Entity | denotes | of cells |
T1556 | 178-190 | Protein | denotes | 17 cytokines |
T1551 | 294-317 | Entity | denotes | of synovial fibroblasts |
T1549 | 192-203 | Protein | denotes | chemokines, |
T1544 | 153-159 | Protein | denotes | type 1 |
T1540 | 164-172 | Entity | denotes | T-helper |
T1537 | 264-278 | Entity | denotes | synovial cells |