PMC:3218875 / 8592-8949 JSONTXT

Annnotations TAB JSON ListView MergeView

    testone

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    bionlp-st-ge-2016-spacy-parsed

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    DLUT931

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T20576","span":{"begin":327,"end":332},"obj":"http://www.uniprot.org/uniprot/Q13490"},{"id":"T20572","span":{"begin":320,"end":325},"obj":"http://www.uniprot.org/uniprot/Q9Y4K3"},{"id":"T20571","span":{"begin":313,"end":318},"obj":"http://www.uniprot.org/uniprot/Q12933"},{"id":"T20567","span":{"begin":269,"end":273},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T20566","span":{"begin":202,"end":205},"obj":"http://www.uniprot.org/uniprot/P01732"},{"id":"T20564","span":{"begin":195,"end":200},"obj":"http://www.uniprot.org/uniprot/Q99836"},{"id":"T20561","span":{"begin":139,"end":142},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T20559","span":{"begin":80,"end":84},"obj":"http://www.uniprot.org/uniprot/O00206"},{"id":"T20558","span":{"begin":64,"end":68},"obj":"http://www.uniprot.org/uniprot/P25942"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    bionlp-st-ge-2016-test-proteins

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    bionlp-st-ge-2016-coref

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    pmc-enju-pas

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    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T20010","span":{"begin":165,"end":170},"obj":"http://purl.obolibrary.org/obo/GO_0016265"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T20047","span":{"begin":294,"end":303},"obj":"http://purl.obolibrary.org/obo/GO_0031386"},{"id":"T20043","span":{"begin":0,"end":6},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T20063","span":{"begin":30,"end":38},"obj":"http://purl.obolibrary.org/obo/GO_0016020"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    sentences

    {"project":"sentences","denotations":[{"id":"T19461","span":{"begin":0,"end":357},"obj":"Sentence"},{"id":"T47","span":{"begin":0,"end":357},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    simple1

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    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T21058","span":{"begin":7,"end":17},"obj":"Binding"},{"id":"T21057","span":{"begin":85,"end":92},"obj":"Positive_regulation"},{"id":"T21056","span":{"begin":97,"end":108},"obj":"Binding"},{"id":"T21009","span":{"begin":64,"end":68},"obj":"Protein"},{"id":"T21008","span":{"begin":334,"end":339},"obj":"Protein"},{"id":"T21007","span":{"begin":327,"end":332},"obj":"Protein"},{"id":"T21006","span":{"begin":320,"end":325},"obj":"Protein"},{"id":"T21005","span":{"begin":313,"end":318},"obj":"Protein"},{"id":"T21004","span":{"begin":282,"end":287},"obj":"Protein"},{"id":"T21003","span":{"begin":275,"end":280},"obj":"Protein"},{"id":"T21002","span":{"begin":269,"end":273},"obj":"Protein"},{"id":"T21001","span":{"begin":252,"end":256},"obj":"Protein"},{"id":"T21000","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T21010","span":{"begin":70,"end":74},"obj":"Protein"},{"id":"T21016","span":{"begin":207,"end":250},"obj":"Protein"},{"id":"T21015","span":{"begin":202,"end":205},"obj":"Protein"},{"id":"T21014","span":{"begin":195,"end":200},"obj":"Protein"},{"id":"T21013","span":{"begin":187,"end":192},"obj":"Protein"},{"id":"T21012","span":{"begin":139,"end":185},"obj":"Protein"},{"id":"T21011","span":{"begin":80,"end":84},"obj":"Protein"}],"relations":[{"id":"R13828","pred":"themeOf","subj":"T21000","obj":"T21058"},{"id":"R13829","pred":"themeOf","subj":"T21001","obj":"T21056"},{"id":"R13830","pred":"themeOf","subj":"T21002","obj":"T21056"},{"id":"R13831","pred":"themeOf","subj":"T21003","obj":"T21056"},{"id":"R13832","pred":"themeOf","subj":"T21004","obj":"T21056"},{"id":"R13833","pred":"themeOf","subj":"T21005","obj":"T21056"},{"id":"R13834","pred":"themeOf","subj":"T21006","obj":"T21056"},{"id":"R13835","pred":"themeOf","subj":"T21007","obj":"T21056"},{"id":"R13836","pred":"themeOf","subj":"T21008","obj":"T21056"},{"id":"R13837","pred":"themeOf","subj":"T21009","obj":"T21058"},{"id":"R13838","pred":"themeOf","subj":"T21010","obj":"T21058"},{"id":"R13839","pred":"themeOf","subj":"T21011","obj":"T21058"},{"id":"R13840","pred":"themeOf","subj":"T21012","obj":"T21056"},{"id":"R13841","pred":"themeOf","subj":"T21013","obj":"T21056"},{"id":"R13842","pred":"themeOf","subj":"T21014","obj":"T21056"},{"id":"R13843","pred":"themeOf","subj":"T21015","obj":"T21056"},{"id":"R13844","pred":"themeOf","subj":"T21016","obj":"T21056"},{"id":"R13868","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13869","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13870","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13871","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13872","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13873","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13874","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13875","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13876","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13880","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13877","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13878","pred":"themeOf","subj":"T21056","obj":"T21057"},{"id":"R13879","pred":"themeOf","subj":"T21056","obj":"T21057"}],"text":"Ligand engagement of specific membrane receptors such as TNFR1, CD40, RANK, and TLR4 trigger the recruitment of specific adaptor proteins (TNF receptor 1-associated death domain protein (TRADD), MyD88, MAL, TIR domain-containing adaptor-inducing IFNβ (TRIF)), kinases (RIP1, IRAK1, IRAK4), and ubiquitin ligases (TRAF2, TRAF6, cIAP1, cIAP2) to the receptor."}

    BioNLP16_Messiy

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    bionlp-st-ge-2016-test-ihmc

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    bionlp-st-ge-2016-test-tees

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