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PMC:3218875 / 7229-7514 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T3954 115-125 Negative_regulation denotes inhibitors
T3852 252-255 Protein denotes p50
T3851 244-247 Protein denotes p52
T3850 217-221 Protein denotes p105
T3849 208-212 Protein denotes p100
T3848 145-150 Protein denotes Bcl-3
T3847 136-140 Protein denotes IκBξ
T3846 97-103 Protein denotes NF-κB2
T3845 77-81 Protein denotes p100
T3844 68-74 Protein denotes NF-κB1
T3843 48-52 Protein denotes p105
T3842 42-46 Protein denotes IκBε
T3841 36-40 Protein denotes IκBβ
T3840 30-34 Protein denotes IκBα
R2776 T3847 T3954 themeOf IκBξ,inhibitors
R2777 T3848 T3954 themeOf Bcl-3,inhibitors

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5971 74-75 -RRB- denotes )
T5970 68-74 NN denotes NF-κB1
T5969 65-67 IN denotes as
T5968 59-64 VBN denotes known
T5967 54-58 RB denotes also
T5966 53-54 -LRB- denotes (
T5965 48-52 NNS denotes p105
T5964 46-47 , denotes ,
T5963 42-46 NNP denotes IκBε
T5962 40-41 , denotes ,
T5961 36-40 NNP denotes IκBβ
T5960 34-35 , denotes ,
T5959 30-34 NNP denotes IκBα
T5958 29-30 -LRB- denotes (
T5957 24-28 NNS denotes IκBs
T5956 21-23 IN denotes of
T5955 12-20 NN denotes majority
T5954 8-11 DT denotes the
T5953 0-7 IN denotes Whereas
T6012 284-285 . denotes .
T6011 272-284 RB denotes respectively
T6010 270-271 , denotes ,
T6009 262-270 NNS denotes subunits
T6008 256-261 JJ denotes NF-κB
T6007 252-255 CD denotes p50
T6006 248-251 CC denotes and
T6005 244-247 CD denotes p52
T6004 240-243 DT denotes the
T6003 237-239 IN denotes of
T6002 226-236 NNS denotes precursors
T6001 222-225 VBP denotes are
T6000 217-221 NNS denotes p105
T5999 213-216 CC denotes and
T5998 208-212 NN denotes p100
T5997 206-207 . denotes .
T5996 199-206 NN denotes nucleus
T5995 195-198 DT denotes the
T5994 192-194 IN denotes in
T5993 176-191 NN denotes transactivation
T5992 170-175 NN denotes NF-κB
T5991 159-169 JJ denotes potentiate
T5990 151-158 RB denotes instead
T5989 145-150 JJ denotes Bcl-3
T5988 141-144 CC denotes and
T5987 136-140 NNP denotes IκBξ
T5986 134-135 , denotes ,
T5985 129-134 NNP denotes NF-κB
T5984 126-128 IN denotes of
T5983 115-125 NNS denotes inhibitors
T5982 112-114 IN denotes as
T5981 106-111 VBP denotes serve
T5980 104-105 -RRB- denotes )
T5979 103-104 -RRB- denotes )
T5978 97-103 NN denotes NF-κB2
T5977 94-96 IN denotes as
T5976 88-93 VBN denotes known
T5975 83-87 RB denotes also
T5974 82-83 -LRB- denotes (
T5973 77-81 NN denotes p100
T5972 75-76 , denotes ,
R4007 T5962 T5961 punct ",",IκBβ
R4009 T5963 T5961 conj IκBε,IκBβ
R4010 T5964 T5963 punct ",",IκBε
R4011 T5965 T5963 conj p105,IκBε
R4013 T5966 T5965 punct (,p105
R4014 T5967 T5968 advmod also,known
R4015 T5968 T5965 acl known,p105
R4017 T5969 T5968 prep as,known
R4018 T5970 T5969 pobj NF-κB1,as
R4022 T5971 T5965 punct ),p105
R4023 T5972 T5959 punct ",",IκBα
R4025 T5973 T5957 appos p100,IκBs
R4026 T5974 T5976 punct (,known
R4028 T5975 T5976 advmod also,known
R4029 T5976 T5973 acl known,p100
R4030 T5977 T5976 prep as,known
R4032 T5978 T5977 pobj NF-κB2,as
R4033 T5979 T5973 punct ),p100
R4035 T5980 T5955 punct ),majority
R4036 T5981 T5981 ROOT serve,serve
R4037 T5982 T5981 prep as,serve
R4038 T5983 T5982 pobj inhibitors,as
R4040 T5984 T5983 prep of,inhibitors
R4041 T5985 T5984 pobj NF-κB,of
R4042 T5986 T5985 punct ",",NF-κB
R4043 T5987 T5985 conj IκBξ,NF-κB
R4044 T5988 T5987 cc and,IκBξ
R4045 T5989 T5987 conj Bcl-3,IκBξ
R4047 T5990 T5993 nmod instead,transactivation
R4048 T5991 T5993 amod potentiate,transactivation
R4049 T5992 T5993 compound NF-κB,transactivation
R4050 T5993 T5983 conj transactivation,inhibitors
R4052 T5994 T5993 prep in,transactivation
R4053 T5995 T5996 det the,nucleus
R4054 T5953 T5981 mark Whereas,serve
R4055 T5996 T5994 pobj nucleus,in
R4056 T5997 T5981 punct .,serve
R4057 T5998 T6001 nsubj p100,are
R4058 T5954 T5955 det the,majority
R4059 T5999 T5998 cc and,p100
R4060 T6000 T5998 conj p105,p100
R4061 T6001 T6001 ROOT are,are
R4062 T6002 T6001 attr precursors,are
R4063 T5955 T5981 nsubj majority,serve
R4064 T6003 T6002 prep of,precursors
R4065 T6004 T6005 det the,p52
R4066 T5956 T5955 prep of,majority
R4067 T6005 T6009 nummod p52,subunits
R4068 T6006 T6005 cc and,p52
R4069 T6007 T6005 conj p50,p52
R4070 T6008 T6009 amod NF-κB,subunits
R4072 T6009 T6003 pobj subunits,of
R4073 T6010 T6009 punct ",",subunits
R4074 T6011 T6001 advmod respectively,are
R4075 T6012 T6001 punct .,are
R4000 T5957 T5956 pobj IκBs,of
R4002 T5958 T5973 punct (,p100
R4003 T5959 T5973 nmod IκBα,p100
R4005 T5960 T5959 punct ",",IκBα
R4006 T5961 T5959 conj IκBβ,IκBα

DLUT931

Id Subject Object Predicate Lexical cue
T7096 252-255 Protein denotes p50
T7095 244-247 Protein denotes p52
T7094 217-221 Protein denotes p105
T7093 208-212 Protein denotes p100
T7092 145-150 Protein denotes Bcl-3
T7091 136-140 Protein denotes IκBξ
T7090 97-103 Protein denotes NF-κB2
T7089 77-81 Protein denotes p100
T7088 68-74 Protein denotes NF-κB1
T7087 48-52 Protein denotes p105
T7086 42-46 Protein denotes IκBε
T7085 36-40 Protein denotes IκBβ
T7084 30-34 Protein denotes IκBα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6874 244-247 http://www.uniprot.org/uniprot/Q00653 denotes p52
T6873 208-212 http://www.uniprot.org/uniprot/Q00653 denotes p100
T6872 77-81 http://www.uniprot.org/uniprot/Q00653 denotes p100
T6871 252-255 http://www.uniprot.org/uniprot/P19838 denotes p50
T6870 217-221 http://www.uniprot.org/uniprot/P19838 denotes p105
T6869 48-52 http://www.uniprot.org/uniprot/P19838 denotes p105
T6868 217-221 http://www.uniprot.org/uniprot/Q14511 denotes p105
T6867 48-52 http://www.uniprot.org/uniprot/Q14511 denotes p105
T6866 42-46 http://www.uniprot.org/uniprot/O00221 denotes IκBε
T6865 36-40 http://www.uniprot.org/uniprot/Q15653 denotes IκBβ

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4473 252-255 Protein denotes p50
T4472 244-247 Protein denotes p52
T4471 217-221 Protein denotes p105
T4470 208-212 Protein denotes p100
T4469 145-150 Protein denotes Bcl-3
T4468 136-140 Protein denotes IκBξ
T4467 97-103 Protein denotes NF-κB2
T4466 77-81 Protein denotes p100
T4465 68-74 Protein denotes NF-κB1
T4464 48-52 Protein denotes p105
T4463 42-46 Protein denotes IκBε
T4462 36-40 Protein denotes IκBβ
T4461 30-34 Protein denotes IκBα

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4655 226-236 NN denotes precursors
T4654 222-225 VB denotes are
T4653 217-221 NN denotes p105
T4652 213-216 CC denotes and
T4651 208-212 NN denotes p100
T4650 199-207 NN denotes nucleus.
T4649 195-198 DT denotes the
T4648 192-194 IN denotes in
T4647 176-191 NN denotes transactivation
T4646 170-175 NN denotes NF-κB
T4645 159-169 VB denotes potentiate
T4644 151-158 RB denotes instead
T4643 145-150 NN denotes Bcl-3
T4642 141-144 CC denotes and
T4641 136-140 NN denotes IκBξ
T4640 134-135 -COMMA- denotes ,
T4639 129-134 NN denotes NF-κB
T4638 126-128 IN denotes of
T4637 115-125 NN denotes inhibitors
T4636 112-114 IN denotes as
T4635 106-111 VB denotes serve
T4634 104-105 -RRB- denotes )
T4633 103-104 -RRB- denotes )
T4632 97-103 NN denotes NF-κB2
T4631 94-96 IN denotes as
T4630 88-93 VB denotes known
T4629 83-87 RB denotes also
T4628 82-83 -LRB- denotes (
T4627 77-81 NN denotes p100
T4626 75-76 -COMMA- denotes ,
T4625 74-75 -RRB- denotes )
T4624 68-74 NN denotes NF-κB1
T4623 65-67 IN denotes as
T4622 59-64 VB denotes known
T4621 54-58 RB denotes also
T4620 53-54 -LRB- denotes (
T4619 48-52 NN denotes p105
T4618 46-47 -COMMA- denotes ,
T4617 42-46 NN denotes IκBε
T4616 40-41 -COMMA- denotes ,
T4615 36-40 NN denotes IκBβ
T4614 34-35 -COMMA- denotes ,
T4613 30-34 NN denotes IκBα
T4612 29-30 -LRB- denotes (
T4611 24-28 NN denotes IκBs
T4610 21-23 IN denotes of
T4609 12-20 NN denotes majority
T4608 8-11 DT denotes the
T4607 0-7 IN denotes Whereas
T4664 272-284 RB denotes respectively
T4663 270-271 -COMMA- denotes ,
T4662 262-270 NN denotes subunits
T4661 256-261 NN denotes NF-κB
T4660 252-255 NN denotes p50
T4659 248-251 CC denotes and
T4658 244-247 NN denotes p52
T4657 240-243 DT denotes the
T4656 237-239 IN denotes of
R3068 T4609 T4608 arg1Of majority,the
R3069 T4609 T4610 arg1Of majority,of
R3070 T4609 T4635 arg1Of majority,serve
R3071 T4611 T4610 arg2Of IκBs,of
R3072 T4611 T4612 arg1Of IκBs,(
R3073 T4613 T4614 arg1Of IκBα,","
R3074 T4614 T4616 arg1Of ",",","
R3075 T4615 T4614 arg2Of IκBβ,","
R3076 T4616 T4618 arg1Of ",",","
R3077 T4617 T4616 arg2Of IκBε,","
R3078 T4618 T4612 arg2Of ",",(
R3079 T4618 T4626 arg1Of ",",","
R3080 T4619 T4618 arg2Of p105,","
R3081 T4619 T4620 arg1Of p105,(
R3082 T4622 T4620 arg2Of known,(
R3083 T4622 T4621 arg1Of known,also
R3084 T4622 T4623 arg1Of known,as
R3085 T4624 T4623 arg2Of NF-κB1,as
R3086 T4625 T4620 arg3Of ),(
R3087 T4627 T4626 arg2Of p100,","
R3088 T4627 T4628 arg1Of p100,(
R3089 T4630 T4628 arg2Of known,(
R3090 T4630 T4629 arg1Of known,also
R3091 T4630 T4631 arg1Of known,as
R3092 T4632 T4631 arg2Of NF-κB2,as
R3093 T4633 T4628 arg3Of ),(
R3094 T4634 T4612 arg3Of ),(
R3095 T4635 T4607 arg2Of serve,Whereas
R3096 T4635 T4636 arg1Of serve,as
R3097 T4637 T4636 arg2Of inhibitors,as
R3098 T4637 T4638 arg1Of inhibitors,of
R3099 T4639 T4638 arg2Of NF-κB,of
R3100 T4641 T4642 arg1Of IκBξ,and
R3101 T4642 T4645 arg1Of and,potentiate
R3102 T4643 T4642 arg2Of Bcl-3,and
R3103 T4645 T4644 arg1Of potentiate,instead
R3104 T4645 T4652 arg1Of potentiate,and
R3105 T4647 T4645 arg2Of transactivation,potentiate
R3106 T4647 T4646 arg1Of transactivation,NF-κB
R3107 T4647 T4648 arg1Of transactivation,in
R3108 T4651 T4648 arg2Of p100,in
R3109 T4651 T4649 arg1Of p100,the
R3110 T4651 T4650 arg1Of p100,nucleus.
R3111 T4652 T4607 arg1Of and,Whereas
R3112 T4652 T4640 arg1Of and,","
R3113 T4653 T4654 arg1Of p105,are
R3114 T4654 T4652 arg2Of are,and
R3115 T4654 T4663 arg1Of are,","
R3116 T4654 T4664 arg1Of are,respectively
R3117 T4655 T4654 arg2Of precursors,are
R3118 T4655 T4656 arg1Of precursors,of
R3119 T4658 T4659 arg1Of p52,and
R3120 T4660 T4659 arg2Of p50,and
R3121 T4662 T4656 arg2Of subunits,of
R3122 T4662 T4657 arg1Of subunits,the
R3123 T4662 T4658 arg1Of subunits,p52
R3124 T4662 T4660 arg1Of subunits,p50
R3125 T4662 T4661 arg1Of subunits,NF-κB

GO-BP

Id Subject Object Predicate Lexical cue
T5497 176-191 http://purl.obolibrary.org/obo/GO_2000144 denotes transactivation
T5496 115-134 http://purl.obolibrary.org/obo/GO_0007252 denotes inhibitors of NF-κB
T5494 115-134 http://purl.obolibrary.org/obo/GO_0032088 denotes inhibitors of NF-κB

GO-CC

Id Subject Object Predicate Lexical cue
T5683 199-206 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T4238 0-285 Sentence denotes Whereas the majority of IκBs (IκBα, IκBβ, IκBε, p105 (also known as NF-κB1), p100 (also known as NF-κB2)) serve as inhibitors of NF-κB, IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus. p100 and p105 are precursors of the p52 and p50 NF-κB subunits, respectively.
T40 0-285 Sentence denotes Whereas the majority of IκBs (IκBα, IκBβ, IκBε, p105 (also known as NF-κB1), p100 (also known as NF-κB2)) serve as inhibitors of NF-κB, IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus. p100 and p105 are precursors of the p52 and p50 NF-κB subunits, respectively.

simple1

Id Subject Object Predicate Lexical cue
T5802 252-255 Protein denotes p50
T5801 244-247 Protein denotes p52
T5800 217-221 Protein denotes p105
T5799 208-212 Protein denotes p100
T5798 145-150 Protein denotes Bcl-3
T5797 136-140 Protein denotes IκBξ
T5796 97-103 Protein denotes NF-κB2
T5795 77-81 Protein denotes p100
T5794 68-74 Protein denotes NF-κB1
T5793 48-52 Protein denotes p105
T5792 42-46 Protein denotes IκBε
T5791 36-40 Protein denotes IκBβ
T5790 30-34 Protein denotes IκBα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7831 252-255 Protein denotes p50
T7830 244-247 Protein denotes p52
T7829 217-221 Protein denotes p105
T7828 208-212 Protein denotes p100
T7827 145-150 Protein denotes Bcl-3
T7826 136-140 Protein denotes IκBξ
T7825 97-103 Protein denotes NF-κB2
T7824 77-81 Protein denotes p100
T7823 68-74 Protein denotes NF-κB1
T7822 48-52 Protein denotes p105
T7821 42-46 Protein denotes IκBε
T7820 36-40 Protein denotes IκBβ
T7819 30-34 Protein denotes IκBα

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6954 252-255 Protein denotes p50
T6953 244-247 Protein denotes p52
T6952 217-221 Protein denotes p105
T6951 208-212 Protein denotes p100
T6950 145-150 Protein denotes Bcl-3
T6949 136-140 Protein denotes IκBξ
T6948 97-103 Protein denotes NF-κB2
T6947 77-81 Protein denotes p100
T6946 68-74 Protein denotes NF-κB1
T6945 48-52 Protein denotes p105
T6944 42-46 Protein denotes IκBε
T6943 36-40 Protein denotes IκBβ
T6942 30-34 Protein denotes IκBα

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8191 170-206 Positive_regulation denotes NF-κB transactivation in the nucleus
T8176 136-206 Positive_regulation denotes IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus
T8175 136-206 Positive_regulation denotes IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus
T8158 30-34 Protein denotes IκBα
T8150 145-150 Protein denotes Bcl-3
T8127 8-52 Protein denotes the majority of IκBs (IκBα, IκBβ, IκBε, p105
T8121 252-255 Protein denotes p50
T8120 97-103 Protein denotes NF-κB2
T8110 217-221 Protein denotes p105
T8073 208-212 Protein denotes p100
T8051 115-135 Entity denotes inhibitors of NF-κB,
T8047 244-247 Protein denotes p52
T8045 170-175 Protein denotes NF-κB
T8033 68-74 Protein denotes NF-κB1
T8022 42-46 Protein denotes IκBε
T8016 252-261 Protein denotes p50 NF-κB
T8005 129-134 Protein denotes NF-κB
T7992 77-81 Protein denotes p100
T7986 136-140 Protein denotes IκBξ
T7985 36-47 Protein denotes IκBβ, IκBε,
T7973 195-206 Entity denotes the nucleus
R5472 T7986 T8176 causeOf IκBξ,IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus
R5514 T8045 T8191 themeOf NF-κB,NF-κB transactivation in the nucleus
R5560 T8150 T8175 causeOf Bcl-3,IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus
R5565 T8191 T8175 themeOf NF-κB transactivation in the nucleus,IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus
R5566 T8191 T8176 themeOf NF-κB transactivation in the nucleus,IκBξ and Bcl-3 instead potentiate NF-κB transactivation in the nucleus

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7379 252-270 Protein denotes p50 NF-κB subunits
T7378 244-247 Protein denotes p52
T7377 217-221 Protein denotes p105
T7376 208-212 Protein denotes p100
T7375 115-125 Negative_regulation denotes inhibitors
T7374 115-125 Negative_regulation denotes inhibitors
T7373 176-191 Positive_regulation denotes transactivation
T7372 176-191 Positive_regulation denotes transactivation
T7371 115-125 Negative_regulation denotes inhibitors
T7370 159-175 Protein denotes potentiate NF-κB
T7369 145-150 Protein denotes Bcl-3
T7368 136-140 Protein denotes IκBξ
T7367 129-134 Protein denotes NF-κB
T7366 97-103 Protein denotes NF-κB2
T7365 77-81 Protein denotes p100
T7364 68-74 Protein denotes NF-κB1
T7363 48-52 Protein denotes p105
R5128 T7367 T7371 themeOf NF-κB,inhibitors
R5130 T7370 T7372 themeOf potentiate NF-κB,transactivation
R5131 T7370 T7373 themeOf potentiate NF-κB,transactivation
R5132 T7372 T7368 Cause transactivation,IκBξ
R5134 T7372 T7374 themeOf transactivation,inhibitors
R5137 T7373 T7369 Cause transactivation,Bcl-3
R5138 T7373 T7375 themeOf transactivation,inhibitors

test3

Id Subject Object Predicate Lexical cue
T4110 252-255 Protein denotes p50
T4109 244-247 Protein denotes p52
T4108 217-221 Protein denotes p105
T4107 208-212 Protein denotes p100
T4106 145-150 Protein denotes Bcl-3
T4105 136-140 Protein denotes IκBξ
T4104 115-125 Negative_regulation denotes inhibitors
T4103 97-103 Protein denotes NF-κB2
T4102 77-81 Protein denotes p100
T4101 68-74 Protein denotes NF-κB1
T4100 48-52 Protein denotes p105
T4099 42-46 Protein denotes IκBε
T4098 36-40 Protein denotes IκBβ
T4097 30-34 Protein denotes IκBα
T3996 252-255 Protein denotes p50
T3995 244-247 Protein denotes p52
T3994 217-221 Protein denotes p105
T3993 208-212 Protein denotes p100
T3992 145-150 Protein denotes Bcl-3
T3991 136-140 Protein denotes IκBξ
T3990 97-103 Protein denotes NF-κB2
T3989 77-81 Protein denotes p100
T3988 68-74 Protein denotes NF-κB1
T3987 48-52 Protein denotes p105
T3986 42-46 Protein denotes IκBε
T3985 36-40 Protein denotes IκBβ
T3984 30-34 Protein denotes IκBα
R2842 T4105 T4104 themeOf IκBξ,inhibitors
R2843 T4106 T4104 themeOf Bcl-3,inhibitors