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PMC:3218875 / 6614-6824 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T1669 145-155 Protein denotes tenascin C
T1668 135-143 Protein denotes biglycan
T1667 122-133 Protein denotes fibronectin

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3244 209-210 . denotes .
T3243 208-209 -RRB- denotes )
T3242 207-208 NNP denotes ]
T3241 202-207 CD denotes 14,15
T3240 201-202 NNP denotes [
T3239 198-200 IN denotes in
T3238 189-197 VBN denotes reviewed
T3237 188-189 -LRB- denotes (
T3236 178-187 NNS denotes fragments
T3235 173-177 NN denotes acid
T3234 161-172 JJ denotes hyal-uronic
T3233 157-160 CC denotes and
T3232 155-156 , denotes ,
T3231 154-155 NNP denotes C
T3230 145-153 NN denotes tenascin
T3229 143-144 , denotes ,
T3228 135-143 NN denotes biglycan
T3227 133-134 , denotes ,
T3226 122-133 NN denotes fibronectin
T3225 120-121 , denotes ,
T3224 110-120 NN denotes fibrinogen
T3223 107-109 IN denotes as
T3222 102-106 JJ denotes such
T3221 91-101 NNS denotes components
T3220 84-90 NN denotes matrix
T3219 70-83 JJ denotes extracellular
T3218 66-69 VBP denotes are
T3217 56-65 NN denotes pathology
T3216 53-55 NNP denotes RA
T3215 50-52 IN denotes in
T3214 41-49 VBN denotes involved
T3213 38-40 VB denotes be
T3212 34-37 MD denotes may
T3211 29-33 WDT denotes that
T3210 21-28 NNS denotes ligands
T3209 17-20 NNP denotes TLR
T3208 6-16 JJ denotes endogenous
T3207 0-5 JJ denotes Other
R2512 T3214 T3210 relcl involved,ligands
R2513 T3215 T3214 prep in,involved
R2515 T3216 T3217 compound RA,pathology
R2516 T3217 T3215 pobj pathology,in
R2517 T3218 T3218 ROOT are,are
R2519 T3219 T3221 amod extracellular,components
R2520 T3220 T3221 compound matrix,components
R2522 T3221 T3218 attr components,are
R2523 T3222 T3223 amod such,as
R2524 T3223 T3221 prep as,components
R2526 T3224 T3223 pobj fibrinogen,as
R2527 T3225 T3224 punct ",",fibrinogen
R2529 T3226 T3224 conj fibronectin,fibrinogen
R2530 T3227 T3226 punct ",",fibronectin
R2531 T3228 T3226 conj biglycan,fibronectin
R2533 T3229 T3228 punct ",",biglycan
R2534 T3230 T3231 compound tenascin,C
R2535 T3231 T3228 conj C,biglycan
R2537 T3232 T3231 punct ",",C
R2538 T3233 T3231 cc and,C
R2539 T3234 T3236 amod hyal-uronic,fragments
R2541 T3235 T3236 compound acid,fragments
R2542 T3236 T3231 conj fragments,C
R2543 T3237 T3236 punct (,fragments
R2545 T3238 T3236 acl reviewed,fragments
R2546 T3239 T3238 prep in,reviewed
R2548 T3240 T3239 pobj [,in
R2549 T3241 T3242 nummod "14,15",]
R2551 T3242 T3240 appos ],[
R2552 T3243 T3240 punct ),[
R2553 T3244 T3218 punct .,are
R2669 T3207 T3210 amod Other,ligands
R2674 T3208 T3210 amod endogenous,ligands
R2677 T3209 T3210 compound TLR,ligands
R2678 T3210 T3218 nsubj ligands,are
R2679 T3211 T3214 nsubjpass that,involved
R2680 T3212 T3214 aux may,involved
R2681 T3213 T3214 auxpass be,involved

DLUT931

Id Subject Object Predicate Lexical cue
T3389 145-155 Protein denotes tenascin C
T3388 135-143 Protein denotes biglycan
T3387 122-133 Protein denotes fibronectin

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1846 145-155 Protein denotes tenascin C
T1845 135-143 Protein denotes biglycan
T1844 122-133 Protein denotes fibronectin

2_test

Id Subject Object Predicate Lexical cue
21639951-19772831-4289446 202-204 19772831 denotes 14
21639951-20629986-4289447 205-207 20629986 denotes 15

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2464 208-209 -RRB- denotes )
T2463 207-208 -RRB- denotes ]
T2462 202-207 CD denotes 14,15
T2461 201-202 -LRB- denotes [
T2460 198-200 IN denotes in
T2459 189-197 VB denotes reviewed
T2458 188-189 -LRB- denotes (
T2457 178-187 NN denotes fragments
T2456 173-177 NN denotes acid
T2455 161-172 JJ denotes hyal-uronic
T2454 157-160 CC denotes and
T2453 155-156 -COMMA- denotes ,
T2452 154-155 NN denotes C
T2451 145-153 NN denotes tenascin
T2450 143-144 -COMMA- denotes ,
T2449 135-143 NN denotes biglycan
T2448 133-134 -COMMA- denotes ,
T2447 122-133 NN denotes fibronectin
T2446 120-121 -COMMA- denotes ,
T2445 110-120 NN denotes fibrinogen
T2444 107-109 IN denotes as
T2443 102-106 JJ denotes such
T2442 91-101 NN denotes components
T2441 84-90 NN denotes matrix
T2440 70-83 JJ denotes extracellular
T2439 66-69 VB denotes are
T2438 56-65 NN denotes pathology
T2437 53-55 NN denotes RA
T2436 50-52 IN denotes in
T2435 41-49 VB denotes involved
T2434 38-40 VB denotes be
T2433 34-37 MD denotes may
T2432 29-33 WDT denotes that
T2431 21-28 NN denotes ligands
T2430 17-20 NN denotes TLR
T2429 6-16 JJ denotes endogenous
T2428 0-5 JJ denotes Other
R1933 T2438 T2437 arg1Of pathology,RA
R1934 T2442 T2440 arg1Of components,extracellular
R1935 T2442 T2441 arg1Of components,matrix
R1921 T2431 T2428 arg1Of ligands,Other
R1922 T2431 T2429 arg1Of ligands,endogenous
R1923 T2431 T2430 arg1Of ligands,TLR
R1924 T2431 T2432 arg1Of ligands,that
R1925 T2431 T2433 arg1Of ligands,may
R1926 T2431 T2434 arg1Of ligands,be
R1927 T2431 T2435 arg2Of ligands,involved
R1928 T2431 T2439 arg1Of ligands,are
R1929 T2435 T2433 arg2Of involved,may
R1930 T2435 T2434 arg2Of involved,be
R1931 T2435 T2436 arg1Of involved,in
R1932 T2438 T2436 arg2Of pathology,in
R1936 T2442 T2444 arg1Of components,as
R1937 T2442 T2454 arg1Of components,and
R1938 T2444 T2443 arg1Of as,such
R1939 T2445 T2446 arg1Of fibrinogen,","
R1940 T2446 T2448 arg1Of ",",","
R1941 T2447 T2446 arg2Of fibronectin,","
R1942 T2448 T2450 arg1Of ",",","
R1943 T2449 T2448 arg2Of biglycan,","
R1944 T2450 T2444 arg2Of ",",as
R1945 T2452 T2450 arg2Of C,","
R1946 T2452 T2451 arg1Of C,tenascin
R1947 T2454 T2439 arg2Of and,are
R1948 T2454 T2453 arg1Of and,","
R1949 T2457 T2454 arg2Of fragments,and
R1950 T2457 T2455 arg1Of fragments,hyal-uronic
R1951 T2457 T2456 arg1Of fragments,acid
R1952 T2457 T2458 arg1Of fragments,(
R1953 T2459 T2458 arg2Of reviewed,(
R1954 T2459 T2460 arg1Of reviewed,in
R1955 T2459 T2461 arg1Of reviewed,[
R1956 T2462 T2461 arg2Of "14,15",[
R1957 T2463 T2461 arg3Of ],[
R1958 T2464 T2458 arg3Of ),(

UBERON-AE

Id Subject Object Predicate Lexical cue
T1754 161-165 http://purl.obolibrary.org/obo/UBERON_3000101 denotes hyal

GO-MF

Id Subject Object Predicate Lexical cue
T2524 21-28 http://purl.obolibrary.org/obo/GO_0005488 denotes ligands

GO-CC

Id Subject Object Predicate Lexical cue
T2547 110-120 http://purl.obolibrary.org/obo/GO_0005577 denotes fibrinogen
T2546 70-101 http://purl.obolibrary.org/obo/GO_0044420 denotes extracellular matrix components
T2545 70-90 http://purl.obolibrary.org/obo/GO_0031012 denotes extracellular matrix
T2544 70-83 http://purl.obolibrary.org/obo/GO_0005576 denotes extracellular

sentences

Id Subject Object Predicate Lexical cue
T1771 0-210 Sentence denotes Other endogenous TLR ligands that may be involved in RA pathology are extracellular matrix components such as fibrinogen, fibronectin, biglycan, tenascin C, and hyal-uronic acid fragments (reviewed in [14,15]).
T36 0-210 Sentence denotes Other endogenous TLR ligands that may be involved in RA pathology are extracellular matrix components such as fibrinogen, fibronectin, biglycan, tenascin C, and hyal-uronic acid fragments (reviewed in [14,15]).

simple1

Id Subject Object Predicate Lexical cue
T2603 145-155 Protein denotes tenascin C
T2602 135-143 Protein denotes biglycan
T2601 122-133 Protein denotes fibronectin

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T3573 145-155 Protein denotes tenascin C
T3572 135-143 Protein denotes biglycan
T3571 122-133 Protein denotes fibronectin

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3317 145-155 Protein denotes tenascin C
T3316 135-143 Protein denotes biglycan
T3315 122-133 Protein denotes fibronectin

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T3660 122-133 Protein denotes fibronectin
T3654 161-177 Entity denotes hyal-uronic acid
T3637 110-120 Protein denotes fibrinogen
T3634 135-143 Protein denotes biglycan
T3620 70-109 Entity denotes extracellular matrix components such as
T3608 21-55 Entity denotes ligands that may be involved in RA
T3588 145-153 Protein denotes tenascin
T3679 50-55 Protein denotes in RA

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3469 145-155 Protein denotes tenascin C
T3468 122-133 Protein denotes fibronectin
T3467 110-120 Protein denotes fibrinogen

test3

Id Subject Object Predicate Lexical cue
T1746 145-155 Protein denotes tenascin C
T1745 135-143 Protein denotes biglycan
T1744 122-133 Protein denotes fibronectin
T1709 145-155 Protein denotes tenascin C
T1708 135-143 Protein denotes biglycan
T1707 122-133 Protein denotes fibronectin