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PMC:3218875 / 52-409 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T122 0-10 JJ denotes rheumatoid
T123 11-20 NNS denotes arthritis
T172 354-355 DT denotes a
T171 344-353 VBG denotes including
T170 342-343 , denotes ,
T169 337-342 NN denotes check
T168 334-336 IN denotes in
T167 323-333 NN denotes signalling
T166 317-322 JJ denotes NF-κB
T165 312-316 VB denotes keep
T164 309-311 TO denotes to
T163 302-308 NN denotes system
T162 294-301 NN denotes control
T161 281-293 JJ denotes multilayered
T160 279-280 DT denotes a
T159 272-278 VBP denotes employ
T158 266-271 NNS denotes Cells
T157 264-265 . denotes .
T156 255-264 NNS denotes arthritis
T155 244-254 JJ denotes rheumatoid
T154 234-243 VBG denotes including
T153 232-233 , denotes ,
T152 224-232 NNS denotes diseases
T151 211-223 JJ denotes inflammatory
T150 207-210 CC denotes and
T149 196-206 JJ denotes autoimmune
T148 191-195 JJ denotes many
T147 186-190 IN denotes with
T146 179-185 VBN denotes linked
T145 174-178 VBN denotes been
T144 170-173 VBZ denotes has
T143 161-169 NN denotes activity
T142 155-160 NN denotes NF-κB
T141 141-154 JJ denotes inappropriate
T140 137-140 CC denotes and
T139 135-136 , denotes ,
T138 126-135 NNS denotes responses
T137 120-125 NN denotes mmune
T136 116-119 CC denotes and
T135 103-115 NN denotes inflammation
T134 100-102 IN denotes of
T133 89-99 NN denotes regulation
T132 85-88 DT denotes the
T131 82-84 IN denotes in
T130 76-81 NNS denotes roles
T129 68-75 JJ denotes crucial
T128 62-67 VBZ denotes plays
T127 56-61 NNP denotes NF-κB
T126 49-55 NN denotes factor
T125 35-48 NN denotes transcription
T124 31-34 DT denotes The
R108 T122 T123 amod rheumatoid,arthritis
R110 T124 T126 det The,factor
R111 T125 T126 compound transcription,factor
R112 T126 T128 nsubj factor,plays
R113 T127 T128 nsubj NF-κB,plays
R114 T128 T128 ROOT plays,plays
R115 T129 T130 amod crucial,roles
R116 T130 T128 dobj roles,plays
R117 T131 T128 prep in,plays
R118 T132 T133 det the,regulation
R119 T133 T131 pobj regulation,in
R120 T134 T133 prep of,regulation
R121 T135 T138 nmod inflammation,responses
R122 T136 T135 cc and,inflammation
R123 T137 T135 conj mmune,inflammation
R124 T138 T134 pobj responses,of
R125 T139 T133 punct ",",regulation
R126 T140 T133 cc and,regulation
R127 T141 T143 amod inappropriate,activity
R128 T142 T143 compound NF-κB,activity
R129 T143 T133 conj activity,regulation
R130 T144 T146 aux has,linked
R131 T145 T146 auxpass been,linked
R132 T146 T128 conj linked,plays
R133 T147 T146 prep with,linked
R134 T148 T152 amod many,diseases
R135 T149 T152 amod autoimmune,diseases
R136 T150 T149 cc and,autoimmune
R137 T151 T149 conj inflammatory,autoimmune
R138 T152 T147 pobj diseases,with
R139 T153 T152 punct ",",diseases
R140 T154 T152 prep including,diseases
R141 T155 T156 amod rheumatoid,arthritis
R142 T156 T154 pobj arthritis,including
R143 T157 T128 punct .,plays
R144 T158 T159 nsubj Cells,employ
R145 T159 T159 ROOT employ,employ
R146 T160 T163 det a,system
R147 T161 T163 amod multilayered,system
R148 T162 T163 compound control,system
R149 T163 T159 dobj system,employ
R150 T164 T165 aux to,keep
R151 T165 T163 relcl keep,system
R152 T166 T167 amod NF-κB,signalling
R153 T167 T165 dobj signalling,keep
R154 T168 T165 prep in,keep
R155 T169 T168 pobj check,in
R156 T170 T165 punct ",",keep
R157 T171 T165 prep including,keep

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13 0-10 JJ denotes rheumatoid
T14 11-20 NN denotes arthritis
T44 232-233 -COMMA- denotes ,
T43 224-232 NN denotes diseases
T42 211-223 JJ denotes inflammatory
T41 207-210 CC denotes and
T40 196-206 JJ denotes autoimmune
T39 191-195 JJ denotes many
T38 186-190 IN denotes with
T37 179-185 VB denotes linked
T36 174-178 VB denotes been
T35 170-173 VB denotes has
T34 161-169 NN denotes activity
T33 155-160 NN denotes NF-κB
T32 141-154 JJ denotes inappropriate
T31 137-140 CC denotes and
T30 135-136 -COMMA- denotes ,
T29 126-135 NN denotes responses
T28 120-125 JJ denotes mmune
T27 116-119 CC denotes and
T26 103-115 NN denotes inflammation
T25 100-102 IN denotes of
T24 89-99 NN denotes regulation
T23 85-88 DT denotes the
T22 82-84 IN denotes in
T21 76-81 NN denotes roles
T20 68-75 JJ denotes crucial
T19 62-67 VB denotes plays
T18 56-61 NN denotes NF-κB
T17 49-55 NN denotes factor
T16 35-48 NN denotes transcription
T15 31-34 DT denotes The
T62 354-355 DT denotes a
T61 344-353 VB denotes including
T60 342-343 -COMMA- denotes ,
T59 337-342 NN denotes check
T58 334-336 IN denotes in
T57 323-333 NN denotes signalling
T56 317-322 NN denotes NF-κB
T55 312-316 VB denotes keep
T54 309-311 TO denotes to
T53 302-308 NN denotes system
T52 294-301 NN denotes control
T51 281-293 JJ denotes multilayered
T50 279-280 DT denotes a
T49 272-278 VB denotes employ
T48 266-271 NN denotes Cells
T47 255-264 NN denotes arthritis
T46 244-254 JJ denotes rheumatoid
T45 234-243 VB denotes including
R9 T14 T13 arg1Of arthritis,rheumatoid
R10 T18 T15 arg1Of NF-κB,The
R11 T18 T16 arg1Of NF-κB,transcription
R12 T18 T17 arg1Of NF-κB,factor
R13 T18 T19 arg1Of NF-κB,plays
R14 T19 T22 arg1Of plays,in
R15 T19 T31 arg1Of plays,and
R16 T21 T19 arg2Of roles,plays
R17 T21 T20 arg1Of roles,crucial
R18 T24 T22 arg2Of regulation,in
R19 T24 T23 arg1Of regulation,the
R20 T24 T25 arg1Of regulation,of
R21 T26 T27 arg1Of inflammation,and
R22 T27 T25 arg2Of and,of
R23 T29 T27 arg2Of responses,and
R24 T29 T28 arg1Of responses,mmune
R25 T31 T30 arg1Of and,","
R26 T34 T32 arg1Of activity,inappropriate
R27 T34 T33 arg1Of activity,NF-κB
R28 T34 T35 arg1Of activity,has
R29 T34 T36 arg1Of activity,been
R30 T34 T37 arg2Of activity,linked
R31 T37 T31 arg2Of linked,and
R32 T37 T35 arg2Of linked,has
R33 T37 T36 arg2Of linked,been
R34 T37 T38 arg1Of linked,with
R35 T40 T41 arg1Of autoimmune,and
R36 T42 T41 arg2Of inflammatory,and
R37 T43 T38 arg2Of diseases,with
R38 T43 T39 arg1Of diseases,many
R39 T43 T40 arg1Of diseases,autoimmune
R40 T43 T42 arg1Of diseases,inflammatory
R41 T43 T44 arg1Of diseases,","
R42 T43 T45 arg1Of diseases,including
R43 T47 T45 arg2Of arthritis,including
R44 T47 T46 arg1Of arthritis,rheumatoid
R45 T48 T49 arg1Of Cells,employ
R46 T49 T54 modOf employ,to
R47 T53 T49 arg2Of system,employ
R48 T53 T50 arg1Of system,a
R49 T53 T51 arg1Of system,multilayered
R50 T53 T52 arg1Of system,control
R51 T55 T54 arg1Of keep,to
R52 T55 T58 arg1Of keep,in
R53 T57 T55 arg2Of signalling,keep
R54 T57 T56 arg1Of signalling,NF-κB
R55 T59 T58 arg2Of check,in
R56 T59 T60 arg1Of check,","
R57 T59 T61 arg1Of check,including

GO-BP

Id Subject Object Predicate Lexical cue
T100 89-99 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T101 35-48 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T102 103-115 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T103 317-333 http://purl.obolibrary.org/obo/GO_0038061 denotes NF-κB signalling
T105 323-333 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling

sentences

Id Subject Object Predicate Lexical cue
T2 31-265 Sentence denotes The transcription factor NF-κB plays crucial roles in the regulation of inflammation and mmune responses, and inappropriate NF-κB activity has been linked with many autoimmune and inflammatory diseases, including rheumatoid arthritis.
T2 22-30 Sentence denotes Abstract
T3 31-265 Sentence denotes The transcription factor NF-κB plays crucial roles in the regulation of inflammation and mmune responses, and inappropriate NF-κB activity has been linked with many autoimmune and inflammatory diseases, including rheumatoid arthritis.

ICD10

Id Subject Object Predicate Lexical cue
T109 244-264 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis
T112 255-264 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis
T108 0-20 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis
T111 11-20 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T238 141-185 Binding denotes inappropriate NF-κB activity has been linked
T237 155-160 Protein denotes NF-κB
T235 317-333 Protein denotes NF-κB signalling
T234 56-61 Protein denotes NF-κB
T233 266-271 Entity denotes Cells

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T215 35-61 Protein denotes transcription factor NF-κB
T216 155-160 Protein denotes NF-κB
T217 317-322 Protein denotes NF-κB