PMC:3218875 / 30575-30757
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17347 | 114-121 | Positive_regulation | denotes | induced |
T17320 | 161-164 | Protein | denotes | TNF |
T17319 | 154-159 | Protein | denotes | IL-1β |
T17318 | 15-22 | Protein | denotes | miR-155 |
T17317 | 9-10 | Protein | denotes | b |
T17316 | 0-8 | Protein | denotes | miR-146a |
R11370 | T17316 | T17347 | themeOf | miR-146a,induced |
R11371 | T17318 | T17347 | themeOf | miR-155,induced |
R11372 | T17319 | T17347 | causeOf | IL-1β,induced |
R11373 | T17320 | T17347 | causeOf | TNF,induced |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18132 | 181-182 | . | denotes | . |
T18131 | 180-181 | NNP | denotes | ] |
T18130 | 175-180 | CD | denotes | 78,79 |
T18129 | 174-175 | NNP | denotes | [ |
T18128 | 169-173 | NNP | denotes | TLRs |
T18127 | 165-168 | CC | denotes | and |
T18126 | 161-164 | NNP | denotes | TNF |
T18125 | 159-160 | , | denotes | , |
T18124 | 154-159 | NN | denotes | IL-1β |
T18123 | 151-153 | IN | denotes | as |
T18122 | 146-150 | JJ | denotes | such |
T18121 | 138-145 | NNS | denotes | stimuli |
T18120 | 125-137 | JJ | denotes | inflammatory |
T18119 | 122-124 | IN | denotes | by |
T18118 | 114-121 | VBN | denotes | induced |
T18117 | 111-113 | VB | denotes | be |
T18116 | 107-110 | MD | denotes | can |
T18115 | 100-106 | NNS | denotes | miRNAs |
T18114 | 94-99 | DT | denotes | these |
T18113 | 88-93 | IN | denotes | since |
T18112 | 86-87 | , | denotes | , |
T18111 | 81-86 | NNP | denotes | NF-κB |
T18110 | 78-80 | TO | denotes | to |
T18109 | 67-77 | NN | denotes | signalling |
T18108 | 54-66 | JJ | denotes | inflammatory |
T18107 | 50-53 | IN | denotes | for |
T18106 | 41-49 | NN | denotes | interest |
T18105 | 30-40 | JJ | denotes | particular |
T18104 | 27-29 | IN | denotes | of |
T18103 | 23-26 | VBP | denotes | are |
T18102 | 15-22 | NN | denotes | miR-155 |
T18101 | 11-14 | CC | denotes | and |
T18100 | 9-10 | NN | denotes | b |
T18099 | 8-9 | NN | denotes | / |
T18098 | 0-8 | JJ | denotes | miR-146a |
R11954 | T18098 | T18100 | amod | miR-146a,b |
R11955 | T18099 | T18100 | compound | /,b |
R11956 | T18100 | T18103 | nsubj | b,are |
R11957 | T18101 | T18100 | cc | and,b |
R11958 | T18102 | T18100 | conj | miR-155,b |
R11959 | T18103 | T18103 | ROOT | are,are |
R11960 | T18104 | T18103 | prep | of,are |
R11961 | T18105 | T18106 | amod | particular,interest |
R11962 | T18106 | T18104 | pobj | interest,of |
R11963 | T18107 | T18103 | prep | for,are |
R11964 | T18108 | T18109 | amod | inflammatory,signalling |
R11965 | T18109 | T18107 | pobj | signalling,for |
R11966 | T18110 | T18109 | prep | to,signalling |
R11967 | T18111 | T18110 | pobj | NF-κB,to |
R11968 | T18112 | T18103 | punct | ",",are |
R11969 | T18113 | T18118 | mark | since,induced |
R11970 | T18114 | T18115 | det | these,miRNAs |
R11971 | T18115 | T18118 | nsubjpass | miRNAs,induced |
R11972 | T18116 | T18118 | aux | can,induced |
R11973 | T18117 | T18118 | auxpass | be,induced |
R11974 | T18118 | T18103 | advcl | induced,are |
R11975 | T18119 | T18118 | agent | by,induced |
R11976 | T18120 | T18121 | amod | inflammatory,stimuli |
R11977 | T18121 | T18119 | pobj | stimuli,by |
R11978 | T18122 | T18123 | amod | such,as |
R11979 | T18123 | T18121 | prep | as,stimuli |
R11980 | T18124 | T18123 | pobj | IL-1β,as |
R11981 | T18125 | T18124 | punct | ",",IL-1β |
R11982 | T18126 | T18124 | conj | TNF,IL-1β |
R11983 | T18127 | T18126 | cc | and,TNF |
R11984 | T18128 | T18129 | compound | TLRs,[ |
R11985 | T18129 | T18126 | conj | [,TNF |
R11986 | T18130 | T18131 | compound | "78,79",] |
R11987 | T18131 | T18126 | conj | ],TNF |
R11988 | T18132 | T18103 | punct | .,are |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18555 | 161-164 | Protein | denotes | TNF |
T18554 | 154-159 | Protein | denotes | IL-1β |
T18553 | 15-22 | Protein | denotes | miR-155 |
T18552 | 9-10 | Protein | denotes | b |
T18551 | 0-8 | Protein | denotes | miR-146a |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18502 | 161-164 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
T18501 | 154-159 | http://www.uniprot.org/uniprot/P01584 | denotes | IL-1β |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17517 | 161-164 | Protein | denotes | TNF |
T17516 | 154-159 | Protein | denotes | IL-1β |
T17515 | 15-22 | Protein | denotes | miR-155 |
T17514 | 9-10 | Protein | denotes | b |
T17513 | 0-8 | Protein | denotes | miR-146a |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17510 | 15-22 | Antecedent | denotes | miR-155 |
T17509 | 94-106 | Anaphor | denotes | these miRNAs |
R11438 | T17509 | T17510 | boundBy | these miRNAs,miR-155 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21639951-16885212-4289510 | 175-177 | 16885212 | denotes | 78 |
21639951-17242365-4289511 | 178-180 | 17242365 | denotes | 79 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17628 | 180-181 | -RRB- | denotes | ] |
T17627 | 175-180 | CD | denotes | 78,79 |
T17626 | 174-175 | -LRB- | denotes | [ |
T17625 | 169-173 | NN | denotes | TLRs |
T17624 | 165-168 | CC | denotes | and |
T17623 | 161-164 | NN | denotes | TNF |
T17622 | 159-160 | -COMMA- | denotes | , |
T17621 | 154-159 | NN | denotes | IL-1β |
T17620 | 151-153 | IN | denotes | as |
T17619 | 146-150 | JJ | denotes | such |
T17618 | 138-145 | NN | denotes | stimuli |
T17617 | 125-137 | JJ | denotes | inflammatory |
T17616 | 122-124 | IN | denotes | by |
T17615 | 114-121 | VB | denotes | induced |
T17614 | 111-113 | VB | denotes | be |
T17613 | 107-110 | MD | denotes | can |
T17612 | 100-106 | NN | denotes | miRNAs |
T17611 | 94-99 | DT | denotes | these |
T17610 | 88-93 | IN | denotes | since |
T17609 | 86-87 | -COMMA- | denotes | , |
T17608 | 81-86 | NN | denotes | NF-κB |
T17607 | 78-80 | TO | denotes | to |
T17606 | 67-77 | NN | denotes | signalling |
T17605 | 54-66 | JJ | denotes | inflammatory |
T17604 | 50-53 | IN | denotes | for |
T17603 | 41-49 | NN | denotes | interest |
T17602 | 30-40 | JJ | denotes | particular |
T17601 | 27-29 | IN | denotes | of |
T17600 | 23-26 | VB | denotes | are |
T17599 | 15-22 | NN | denotes | miR-155 |
T17598 | 11-14 | CC | denotes | and |
T17597 | 0-10 | NN | denotes | miR-146a/b |
R11493 | T17597 | T17598 | arg1Of | miR-146a/b,and |
R11494 | T17598 | T17600 | arg1Of | and,are |
R11495 | T17598 | T17601 | arg1Of | and,of |
R11496 | T17599 | T17598 | arg2Of | miR-155,and |
R11497 | T17600 | T17609 | arg1Of | are,"," |
R11498 | T17600 | T17610 | arg1Of | are,since |
R11499 | T17601 | T17600 | arg2Of | of,are |
R11500 | T17603 | T17601 | arg2Of | interest,of |
R11501 | T17603 | T17602 | arg1Of | interest,particular |
R11502 | T17603 | T17604 | arg1Of | interest,for |
R11503 | T17606 | T17604 | arg2Of | signalling,for |
R11504 | T17606 | T17605 | arg1Of | signalling,inflammatory |
R11505 | T17606 | T17607 | arg1Of | signalling,to |
R11506 | T17608 | T17607 | arg2Of | NF-κB,to |
R11507 | T17612 | T17611 | arg1Of | miRNAs,these |
R11508 | T17612 | T17613 | arg1Of | miRNAs,can |
R11509 | T17612 | T17614 | arg1Of | miRNAs,be |
R11510 | T17612 | T17615 | arg2Of | miRNAs,induced |
R11511 | T17615 | T17610 | arg2Of | induced,since |
R11512 | T17615 | T17613 | arg2Of | induced,can |
R11513 | T17615 | T17614 | arg2Of | induced,be |
R11514 | T17618 | T17615 | arg1Of | stimuli,induced |
R11515 | T17618 | T17616 | arg2Of | stimuli,by |
R11516 | T17618 | T17617 | arg1Of | stimuli,inflammatory |
R11517 | T17618 | T17620 | arg1Of | stimuli,as |
R11518 | T17620 | T17619 | arg1Of | as,such |
R11519 | T17621 | T17622 | arg1Of | IL-1β,"," |
R11520 | T17622 | T17624 | arg1Of | ",",and |
R11521 | T17623 | T17622 | arg2Of | TNF,"," |
R11522 | T17624 | T17620 | arg2Of | and,as |
R11523 | T17625 | T17624 | arg2Of | TLRs,and |
R11524 | T17625 | T17626 | arg1Of | TLRs,[ |
R11525 | T17627 | T17626 | arg2Of | "78,79",[ |
R11526 | T17628 | T17626 | arg3Of | ],[ |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17991 | 67-77 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17439 | 0-182 | Sentence | denotes | miR-146a/b and miR-155 are of particular interest for inflammatory signalling to NF-κB, since these miRNAs can be induced by inflammatory stimuli such as IL-1β, TNF and TLRs [78,79]. |
T176 | 0-182 | Sentence | denotes | miR-146a/b and miR-155 are of particular interest for inflammatory signalling to NF-κB, since these miRNAs can be induced by inflammatory stimuli such as IL-1β, TNF and TLRs [78,79]. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18013 | 161-164 | Protein | denotes | TNF |
T18012 | 154-159 | Protein | denotes | IL-1β |
T18011 | 15-22 | Protein | denotes | miR-155 |
T18010 | 9-10 | Protein | denotes | b |
T18009 | 0-8 | Protein | denotes | miR-146a |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18746 | 161-164 | Protein | denotes | TNF |
T18745 | 154-159 | Protein | denotes | IL-1β |
T18744 | 15-22 | Protein | denotes | miR-155 |
T18743 | 9-10 | Protein | denotes | b |
T18742 | 0-8 | Protein | denotes | miR-146a |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18539 | 114-121 | Positive_regulation | denotes | induced |
T18513 | 161-164 | Protein | denotes | TNF |
T18512 | 154-159 | Protein | denotes | IL-1β |
T18511 | 15-22 | Protein | denotes | miR-155 |
T18510 | 9-10 | Protein | denotes | b |
T18509 | 0-8 | Protein | denotes | miR-146a |
R12357 | T18512 | T18539 | themeOf | IL-1β,induced |
R12358 | T18513 | T18539 | causeOf | TNF,induced |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18852 | 161-164 | Protein | denotes | TNF |
T18847 | 0-10 | Protein | denotes | miR-146a/b |
T18832 | 81-86 | Protein | denotes | NF-κB |
T18821 | 122-159 | Protein | denotes | by inflammatory stimuli such as IL-1β |
T18816 | 0-10 | Protein | denotes | miR-146a/b |
T18810 | 9-10 | Protein | denotes | b |
T18801 | 15-22 | Protein | denotes | miR-155 |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18598 | 161-164 | Protein | denotes | TNF |
T18597 | 154-159 | Protein | denotes | IL-1β |
T18596 | 81-86 | Protein | denotes | NF-κB |
T18595 | 15-22 | Protein | denotes | miR-155 |
T18594 | 0-10 | Protein | denotes | miR-146a/b |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17398 | 161-164 | Protein | denotes | TNF |
T17397 | 154-159 | Protein | denotes | IL-1β |
T17396 | 114-121 | Positive_regulation | denotes | induced |
T17395 | 15-22 | Protein | denotes | miR-155 |
T17394 | 9-10 | Protein | denotes | b |
T17393 | 0-8 | Protein | denotes | miR-146a |
T17366 | 161-164 | Protein | denotes | TNF |
T17365 | 154-159 | Protein | denotes | IL-1β |
T17364 | 15-22 | Protein | denotes | miR-155 |
T17363 | 9-10 | Protein | denotes | b |
T17362 | 0-8 | Protein | denotes | miR-146a |