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PMC:3218875 / 30439-30574 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T17346 5-9 Binding denotes bind

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18097 134-135 . denotes .
T18096 133-134 NNP denotes ]
T18095 131-133 CD denotes 77
T18094 130-131 NNP denotes [
T18093 118-129 NN denotes degradation
T18092 113-117 NNP denotes mRNA
T18091 106-112 NN denotes target
T18090 103-105 IN denotes of
T18089 93-102 NN denotes promotion
T18088 89-92 DT denotes the
T18087 85-88 CC denotes and
T18086 74-84 NN denotes expression
T18085 66-73 NN denotes protein
T18084 63-65 IN denotes of
T18083 52-62 NN denotes repression
T18082 48-51 DT denotes the
T18081 45-47 TO denotes to
T18080 37-44 VBG denotes leading
T18079 31-36 NNS denotes mRNAs
T18078 24-30 NN denotes target
T18077 21-23 IN denotes of
T18076 17-20 NNP denotes UTR
T18075 16-17 : denotes -
T18074 15-16 '' denotes '
T18073 14-15 CD denotes 3
T18072 10-13 DT denotes the
T18071 5-9 NN denotes bind
T18070 0-4 PRP denotes They
R11926 T18070 T18071 nsubj They,bind
R11927 T18071 T18071 ROOT bind,bind
R11928 T18072 T18073 det the,3
R11929 T18073 T18076 meta 3,UTR
R11930 T18074 T18073 punct ',3
R11931 T18075 T18076 punct -,UTR
R11932 T18076 T18071 dobj UTR,bind
R11933 T18077 T18076 prep of,UTR
R11934 T18078 T18079 compound target,mRNAs
R11935 T18079 T18077 pobj mRNAs,of
R11936 T18080 T18079 acl leading,mRNAs
R11937 T18081 T18080 prep to,leading
R11938 T18082 T18083 det the,repression
R11939 T18083 T18081 pobj repression,to
R11940 T18084 T18083 prep of,repression
R11941 T18085 T18086 compound protein,expression
R11942 T18086 T18084 pobj expression,of
R11943 T18087 T18086 cc and,expression
R11944 T18088 T18089 det the,promotion
R11945 T18089 T18086 conj promotion,expression
R11946 T18090 T18089 prep of,promotion
R11947 T18091 T18092 compound target,mRNA
R11948 T18092 T18093 compound mRNA,degradation
R11949 T18093 T18090 pobj degradation,of
R11950 T18094 T18096 nmod [,]
R11951 T18095 T18096 nummod 77,]
R11952 T18096 T18093 appos ],degradation
R11953 T18097 T18071 punct .,bind

2_test

Id Subject Object Predicate Lexical cue
21639951-20098459-4289509 131-133 20098459 denotes 77

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17596 133-134 -RRB- denotes ]
T17595 131-133 CD denotes 77
T17594 130-131 -LRB- denotes [
T17593 118-129 NN denotes degradation
T17592 113-117 NN denotes mRNA
T17591 106-112 NN denotes target
T17590 103-105 IN denotes of
T17589 93-102 NN denotes promotion
T17588 89-92 DT denotes the
T17587 85-88 CC denotes and
T17586 74-84 NN denotes expression
T17585 66-73 NN denotes protein
T17584 63-65 IN denotes of
T17583 52-62 NN denotes repression
T17582 48-51 DT denotes the
T17581 45-47 TO denotes to
T17580 37-44 VB denotes leading
T17579 31-36 NN denotes mRNAs
T17578 24-30 NN denotes target
T17577 21-23 IN denotes of
T17576 14-20 NN denotes 3'-UTR
T17575 10-13 DT denotes the
T17574 5-9 VB denotes bind
T17573 0-4 PRP denotes They
R11470 T17573 T17574 arg1Of They,bind
R11471 T17576 T17574 arg2Of 3'-UTR,bind
R11472 T17576 T17575 arg1Of 3'-UTR,the
R11473 T17576 T17577 arg1Of 3'-UTR,of
R11474 T17579 T17577 arg2Of mRNAs,of
R11475 T17579 T17578 arg1Of mRNAs,target
R11476 T17579 T17580 arg1Of mRNAs,leading
R11477 T17580 T17581 arg1Of leading,to
R11478 T17583 T17582 arg1Of repression,the
R11479 T17583 T17584 arg1Of repression,of
R11480 T17583 T17587 arg1Of repression,and
R11481 T17586 T17584 arg2Of expression,of
R11482 T17586 T17585 arg1Of expression,protein
R11483 T17587 T17581 arg2Of and,to
R11484 T17589 T17587 arg2Of promotion,and
R11485 T17589 T17588 arg1Of promotion,the
R11486 T17589 T17590 arg1Of promotion,of
R11487 T17593 T17590 arg2Of degradation,of
R11488 T17593 T17591 arg1Of degradation,target
R11489 T17593 T17592 arg1Of degradation,mRNA
R11490 T17593 T17594 arg1Of degradation,[
R11491 T17595 T17594 arg2Of 77,[
R11492 T17596 T17594 arg3Of ],[

GO-BP

Id Subject Object Predicate Lexical cue
T17990 118-129 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T17989 113-129 http://purl.obolibrary.org/obo/GO_0006402 denotes mRNA degradation

sentences

Id Subject Object Predicate Lexical cue
T17438 0-135 Sentence denotes They bind the 3'-UTR of target mRNAs leading to the repression of protein expression and the promotion of target mRNA degradation [77].
T175 0-135 Sentence denotes They bind the 3'-UTR of target mRNAs leading to the repression of protein expression and the promotion of target mRNA degradation [77].

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T18866 103-129 Protein_catabolism denotes of target mRNA degradation
T18856 89-134 Positive_regulation denotes the promotion of target mRNA degradation [77]
T18853 63-84 Gene_expression denotes of protein expression
T18811 113-117 Protein denotes mRNA
T18792 24-134 Protein denotes target mRNAs leading to the repression of protein expression and the promotion of target mRNA degradation [77]
T18786 66-73 Protein denotes protein
R12451 T18786 T18853 themeOf protein,of protein expression
R12452 T18811 T18866 themeOf mRNA,of target mRNA degradation
R12464 T18866 T18856 themeOf of target mRNA degradation,the promotion of target mRNA degradation [77]

test3

Id Subject Object Predicate Lexical cue
T17392 5-9 Binding denotes bind