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PMC:3218875 / 27843-28008 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T15438 55-64 Gene_expression denotes expressed
T15429 0-6 Protein denotes SIGIRR
R10163 T15429 T15438 themeOf SIGIRR,expressed

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15950 164-165 . denotes .
T15949 163-164 NNP denotes ]
T15948 158-163 CD denotes 69,70
T15947 157-158 NNP denotes [
T15946 144-156 NNS denotes macro-phages
T15945 137-143 JJ denotes mature
T15944 134-136 IN denotes in
T15943 130-133 RB denotes not
T15942 126-129 CC denotes but
T15941 124-125 , denotes ,
T15940 119-124 NNS denotes cells
T15939 109-118 JJ denotes dendritic
T15938 100-108 NN denotes immature
T15937 96-99 CC denotes and
T15936 86-95 NNS denotes monocytes
T15935 84-85 , denotes ,
T15934 79-84 NNS denotes cells
T15933 68-78 JJ denotes epithelial
T15932 65-67 IN denotes in
T15931 55-64 VBN denotes expressed
T15930 49-54 VBG denotes being
T15929 47-48 , denotes ,
T15928 40-47 NN denotes pattern
T15927 29-39 NN denotes expression
T15926 18-28 VBN denotes restricted
T15925 13-17 RB denotes very
T15924 11-12 DT denotes a
T15923 7-10 VBZ denotes has
T15922 0-6 NNP denotes SIGIRR
R10530 T15922 T15923 nsubj SIGIRR,has
R10531 T15923 T15923 ROOT has,has
R10532 T15924 T15928 det a,pattern
R10533 T15925 T15926 advmod very,restricted
R10534 T15926 T15928 amod restricted,pattern
R10535 T15927 T15928 compound expression,pattern
R10536 T15928 T15923 dobj pattern,has
R10537 T15929 T15928 punct ",",pattern
R10538 T15930 T15931 auxpass being,expressed
R10539 T15931 T15928 acl expressed,pattern
R10540 T15932 T15931 prep in,expressed
R10541 T15933 T15934 amod epithelial,cells
R10542 T15934 T15932 pobj cells,in
R10543 T15935 T15934 punct ",",cells
R10544 T15936 T15934 conj monocytes,cells
R10545 T15937 T15936 cc and,monocytes
R10546 T15938 T15940 amod immature,cells
R10547 T15939 T15940 amod dendritic,cells
R10548 T15940 T15936 conj cells,monocytes
R10549 T15941 T15931 punct ",",expressed
R10550 T15942 T15931 cc but,expressed
R10551 T15943 T15944 neg not,in
R10552 T15944 T15923 prep in,has
R10553 T15945 T15946 amod mature,macro-phages
R10554 T15946 T15944 pobj macro-phages,in
R10555 T15947 T15949 compound [,]
R10556 T15948 T15949 compound "69,70",]
R10557 T15949 T15944 conj ],in
R10558 T15950 T15923 punct .,has

DLUT931

Id Subject Object Predicate Lexical cue
T16104 55-64 Gene_expression denotes expressed
T16103 29-39 Gene_expression denotes expression
T16094 0-6 Protein denotes SIGIRR
R10687 T16094 T16103 themeOf SIGIRR,expression
R10688 T16094 T16104 themeOf SIGIRR,expressed

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15540 0-6 Protein denotes SIGIRR

2_test

Id Subject Object Predicate Lexical cue
21639951-14715412-4289500 158-160 14715412 denotes 69
21639951-20506350-4289501 161-163 20506350 denotes 70

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15641 40-47 NN denotes pattern
T15640 29-39 NN denotes expression
T15639 18-28 JJ denotes restricted
T15638 13-17 RB denotes very
T15637 11-12 DT denotes a
T15636 7-10 VB denotes has
T15635 0-6 NN denotes SIGIRR
T15662 163-164 -RRB- denotes ]
T15661 158-163 CD denotes 69,70
T15660 157-158 -LRB- denotes [
T15659 144-156 NN denotes macro-phages
T15658 137-143 JJ denotes mature
T15657 134-136 IN denotes in
T15656 130-133 RB denotes not
T15655 126-129 CC denotes but
T15654 124-125 -COMMA- denotes ,
T15653 119-124 NN denotes cells
T15652 109-118 JJ denotes dendritic
T15651 100-108 JJ denotes immature
T15650 96-99 CC denotes and
T15649 86-95 NN denotes monocytes
T15648 84-85 -COMMA- denotes ,
T15647 79-84 NN denotes cells
T15646 68-78 JJ denotes epithelial
T15645 65-67 IN denotes in
T15644 55-64 VB denotes expressed
T15643 49-54 VB denotes being
T15642 47-48 -COMMA- denotes ,
R10292 T15635 T15636 arg1Of SIGIRR,has
R10293 T15635 T15643 arg1Of SIGIRR,being
R10294 T15635 T15644 arg2Of SIGIRR,expressed
R10295 T15636 T15642 arg1Of has,","
R10296 T15639 T15638 arg1Of restricted,very
R10297 T15641 T15636 arg2Of pattern,has
R10298 T15641 T15637 arg1Of pattern,a
R10299 T15641 T15639 arg1Of pattern,restricted
R10300 T15641 T15640 arg1Of pattern,expression
R10301 T15644 T15642 arg2Of expressed,","
R10302 T15644 T15643 arg2Of expressed,being
R10303 T15644 T15645 arg1Of expressed,in
R10304 T15644 T15657 arg1Of expressed,in
R10305 T15644 T15660 arg1Of expressed,[
R10306 T15645 T15655 arg1Of in,but
R10307 T15647 T15646 arg1Of cells,epithelial
R10308 T15647 T15648 arg1Of cells,","
R10309 T15648 T15650 arg1Of ",",and
R10310 T15649 T15648 arg2Of monocytes,","
R10311 T15650 T15645 arg2Of and,in
R10312 T15653 T15650 arg2Of cells,and
R10313 T15653 T15651 arg1Of cells,immature
R10314 T15653 T15652 arg1Of cells,dendritic
R10315 T15655 T15654 arg1Of but,","
R10316 T15657 T15655 arg2Of in,but
R10317 T15657 T15656 arg1Of in,not
R10318 T15659 T15657 arg2Of macro-phages,in
R10319 T15659 T15658 arg1Of macro-phages,mature
R10320 T15661 T15660 arg2Of "69,70",[
R10321 T15662 T15660 arg3Of ],[

GO-CC

Id Subject Object Predicate Lexical cue
T15785 119-124 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T15784 79-84 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T15487 0-165 Sentence denotes SIGIRR has a very restricted expression pattern, being expressed in epithelial cells, monocytes and immature dendritic cells, but not in mature macro-phages [69,70].
T155 0-165 Sentence denotes SIGIRR has a very restricted expression pattern, being expressed in epithelial cells, monocytes and immature dendritic cells, but not in mature macro-phages [69,70].

simple1

Id Subject Object Predicate Lexical cue
T15823 0-6 Protein denotes SIGIRR

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16194 55-64 Gene_expression denotes expressed
T16185 0-6 Protein denotes SIGIRR
R10728 T16185 T16194 themeOf SIGIRR,expressed

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16078 55-64 Gene_expression denotes expressed
T16069 0-6 Protein denotes SIGIRR
R10671 T16069 T16078 themeOf SIGIRR,expressed

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16239 11-39 Negative_regulation denotes a very restricted expression
T16228 0-6 Protein denotes SIGIRR
T16222 100-125 Entity denotes immature dendritic cells,
T16220 137-156 Entity denotes mature macro-phages
T16214 68-84 Entity denotes epithelial cells
T16205 86-95 Entity denotes monocytes

test3

Id Subject Object Predicate Lexical cue
T15473 55-64 Gene_expression denotes expressed
T15472 0-6 Protein denotes SIGIRR
T15453 0-6 Protein denotes SIGIRR
R10175 T15472 T15473 themeOf SIGIRR,expressed