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PMC:3218875 / 27336-28653 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T15442 1238-1248 Gene_expression denotes expression
T15441 1100-1110 Gene_expression denotes expression
T15440 1055-1065 Gene_expression denotes expression
T15439 883-892 Negative_regulation denotes deficient
T15438 562-571 Gene_expression denotes expressed
T15437 280-291 Binding denotes interaction
T15436 217-226 Negative_regulation denotes inhibitor
T15435 1258-1264 Protein denotes SIGIRR
T15434 1174-1180 Protein denotes SIGIRR
T15433 1069-1075 Protein denotes SIGIRR
T15432 876-882 Protein denotes SIGIRR
T15431 832-838 Protein denotes SIGIRR
T15430 683-689 Protein denotes SIGIRR
T15429 507-513 Protein denotes SIGIRR
T15428 477-483 Protein denotes SIGIRR
T15427 381-386 Protein denotes IL-1R
T15426 330-335 Protein denotes TRAF6
T15425 321-326 Protein denotes IRAK1
T15424 314-319 Protein denotes MyD88
T15423 230-235 Protein denotes IL-1R
T15422 128-133 Protein denotes TIR-8
T15421 97-103 Protein denotes SIGIRR
T15420 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15419 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
R10157 T15421 T15420 equivalentTo SIGIRR,Single-immunoglobulin IL-1 receptor-related
R10158 T15423 T15436 themeOf IL-1R,inhibitor
R10159 T15423 T15437 themeOf IL-1R,interaction
R10160 T15424 T15437 themeOf MyD88,interaction
R10161 T15425 T15437 themeOf IRAK1,interaction
R10162 T15426 T15437 themeOf TRAF6,interaction
R10163 T15429 T15438 themeOf SIGIRR,expressed
R10164 T15432 T15439 themeOf SIGIRR,deficient
R10165 T15433 T15440 themeOf SIGIRR,expression
R10166 T15435 T15442 themeOf SIGIRR,expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16027 1138-1149 VB denotes investigate
T16026 1135-1137 TO denotes to
T16025 1132-1134 CC denotes or
T16024 1130-1131 , denotes ,
T16023 1122-1130 NNS denotes patients
T16022 1114-1121 NN denotes control
T16021 1111-1113 IN denotes in
T16020 1100-1110 NN denotes expression
T16019 1096-1099 PRP$ denotes its
T16018 1091-1095 IN denotes with
T16017 1082-1090 NNS denotes patients
T16016 1079-1081 NNP denotes RA
T16015 1076-1078 IN denotes in
T16014 1069-1075 NNP denotes SIGIRR
T16013 1066-1068 IN denotes of
T16012 1055-1065 NN denotes expression
T16011 1051-1054 DT denotes the
T16010 1043-1050 VB denotes compare
T16009 1040-1042 TO denotes to
T16008 1028-1039 JJ denotes interesting
T16007 1025-1027 VB denotes be
T16006 1020-1024 MD denotes will
T16005 1017-1019 PRP denotes It
T16004 1015-1016 . denotes .
T16003 1014-1015 NNP denotes ]
T16002 1012-1014 CD denotes 70
T16001 1011-1012 NNP denotes [
T16000 1004-1010 NNS denotes models
T15999 998-1003 NN denotes mouse
T15998 988-997 NNS denotes arthritis
T15997 971-987 JJ denotes collagen-induced
T15996 968-970 IN denotes as
T15995 963-967 RB denotes well
T15994 960-962 RB denotes as
T15993 958-959 , denotes ,
T15992 949-958 NNS denotes arthritis
T15991 933-948 JJ denotes zymosan-induced
T15990 930-932 IN denotes in
T15989 922-929 NN denotes disease
T15988 915-921 JJ denotes severe
T15987 910-914 RBR denotes more
T15986 908-909 DT denotes a
T15985 898-907 VBD denotes developed
T15984 893-897 NNS denotes mice
T15983 876-892 JJ denotes SIGIRR-deficient
T15982 870-875 IN denotes since
T15981 868-869 , denotes ,
T15980 864-868 NN denotes vivo
T15979 861-863 IN denotes in
T15978 851-860 VBN denotes confirmed
T15977 843-850 JJ denotes further
T15976 839-842 VBD denotes was
T15975 832-838 NNP denotes SIGIRR
T15974 829-831 IN denotes of
T15973 820-828 NN denotes function
T15972 809-819 JJ denotes inhibitory
T15971 804-808 DT denotes This
T15970 802-803 . denotes .
T15969 797-802 NNS denotes cells
T15968 788-796 JJ denotes synovial
T15967 785-787 NNP denotes RA
T15966 779-784 JJ denotes human
T15965 776-778 IN denotes by
T15964 766-775 NNS denotes cytokines
T15963 753-765 JJ denotes inflammatory
T15962 750-752 IN denotes of
T15961 742-749 NN denotes release
T15960 730-741 JJ denotes spontaneous
T15959 726-729 DT denotes the
T15958 718-725 VB denotes inhibit
T15957 715-717 TO denotes to
T15956 709-714 VBN denotes shown
T15955 705-708 VBD denotes was
T15954 690-704 NN denotes overexpression
T15953 683-689 NNP denotes SIGIRR
T15952 681-682 , denotes ,
T15951 673-681 RB denotes Recently
T15950 671-672 . denotes .
T15949 670-671 NNP denotes ]
T15948 665-670 CD denotes 69,70
T15947 664-665 NNP denotes [
T15946 651-663 NNS denotes macro-phages
T15945 644-650 JJ denotes mature
T15944 641-643 IN denotes in
T15943 637-640 RB denotes not
T15942 633-636 CC denotes but
T15941 631-632 , denotes ,
T15940 626-631 NNS denotes cells
T15939 616-625 JJ denotes dendritic
T15938 607-615 NN denotes immature
T15937 603-606 CC denotes and
T15936 593-602 NNS denotes monocytes
T15935 591-592 , denotes ,
T15934 586-591 NNS denotes cells
T15933 575-585 JJ denotes epithelial
T15932 572-574 IN denotes in
T15931 562-571 VBN denotes expressed
T15930 556-561 VBG denotes being
T15929 554-555 , denotes ,
T15928 547-554 NN denotes pattern
T15927 536-546 NN denotes expression
T15926 525-535 VBN denotes restricted
T15925 520-524 RB denotes very
T15924 518-519 DT denotes a
T15923 514-517 VBZ denotes has
T15922 507-513 NNP denotes SIGIRR
T15921 505-506 . denotes .
T15920 497-505 JJ denotes unlikely
T15919 493-496 RB denotes not
T15918 490-492 VBZ denotes is
T15917 487-489 NNP denotes RA
T15916 484-486 IN denotes in
T15915 477-483 NNP denotes SIGIRR
T15914 473-476 IN denotes for
T15913 468-472 NN denotes role
T15912 457-467 JJ denotes regulatory
T15911 455-456 DT denotes a
T15910 453-454 , denotes ,
T15909 452-453 NNP denotes ]
T15908 450-452 CD denotes 68
T15907 449-450 NNP denotes [
T15906 446-448 NNP denotes RA
T15905 443-445 IN denotes in
T15904 434-442 VBD denotes observed
T15903 421-433 NN denotes inflammation
T15902 413-420 JJ denotes chronic
T15901 409-412 DT denotes the
T15900 406-408 IN denotes in
T15899 395-405 VBG denotes signalling
T15898 391-394 NNP denotes TLR
T15897 387-390 CC denotes and
T15896 381-386 NN denotes IL-1R
T15895 378-380 IN denotes of
T15894 373-377 NN denotes role
T15893 363-372 JJ denotes important
T15892 359-362 DT denotes the
T15891 353-358 VBN denotes Given
T15890 351-352 . denotes .
T15889 350-351 -RRB- denotes )
T15888 349-350 CD denotes 1
T15887 342-348 NNP denotes Figure
T15886 341-342 -LRB- denotes (
T15885 339-340 NNP denotes ]
T15884 337-339 CD denotes 67
T15883 336-337 NNP denotes [
T15882 330-335 NNP denotes TRAF6
T15881 327-329 CC denotes or
T15880 321-326 NNP denotes IRAK1
T15879 319-320 , denotes ,
T15878 314-319 NNP denotes MyD88
T15877 312-313 , denotes ,
T15876 303-312 NNS denotes receptors
T15875 297-302 DT denotes these
T15874 292-296 IN denotes with
T15873 280-291 NN denotes interaction
T15872 273-279 JJ denotes direct
T15871 265-272 IN denotes through
T15870 256-264 RB denotes probably
T15869 254-255 , denotes ,
T15868 244-254 NN denotes signalling
T15867 240-243 NNP denotes TLR
T15866 236-239 CC denotes and
T15865 230-235 NN denotes IL-1R
T15864 227-229 IN denotes of
T15863 217-226 NN denotes inhibitor
T15862 214-216 DT denotes an
T15861 211-213 IN denotes as
T15860 197-210 VBN denotes characterised
T15859 185-196 RB denotes extensively
T15858 180-184 VBN denotes been
T15857 176-179 VBZ denotes has
T15856 171-175 WDT denotes that
T15855 164-170 NN denotes family
T15854 162-163 NNP denotes R
T15853 160-162 CD denotes -1
T15852 154-160 NNP denotes TLR/IL
T15851 150-153 DT denotes the
T15850 147-149 IN denotes of
T15849 140-146 NN denotes member
T15848 138-139 DT denotes a
T15847 135-137 VBZ denotes is
T15846 133-134 , denotes ,
T15845 128-133 CD denotes TIR-8
T15844 125-127 IN denotes as
T15843 119-124 VBN denotes known
T15842 114-118 RB denotes also
T15841 112-113 , denotes ,
T15840 105-112 NN denotes protein
T15839 103-104 -RRB- denotes )
T15838 97-103 NNP denotes SIGIRR
T15837 96-97 -LRB- denotes (
T15836 79-95 JJ denotes receptor-related
T15835 74-78 NNP denotes IL-1
T15834 52-73 NN denotes Single-immunoglobulin
T15833 44-51 NN denotes protein
T15832 27-43 JJ denotes receptor-related
T15831 22-26 NNP denotes IL-1
T15830 0-21 NN denotes Single-immunoglobulin
T16056 1316-1317 . denotes .
T16055 1314-1316 NNP denotes RA
T16054 1311-1313 IN denotes in
T16053 1304-1310 NN denotes target
T16052 1292-1303 JJ denotes therapeutic
T16051 1280-1291 JJ denotes interesting
T16050 1277-1279 DT denotes an
T16049 1274-1276 VB denotes be
T16048 1269-1273 RB denotes also
T16047 1265-1268 MD denotes may
T16046 1258-1264 NNP denotes SIGIRR
T16045 1256-1257 , denotes ,
T16044 1249-1256 NN denotes pattern
T16043 1238-1248 NN denotes expression
T16042 1227-1237 VBN denotes restricted
T16041 1223-1226 PRP$ denotes its
T16040 1220-1222 IN denotes of
T16039 1212-1219 IN denotes Because
T16038 1210-1211 . denotes .
T16037 1202-1210 NNS denotes patients
T16036 1199-1201 NNP denotes RA
T16035 1196-1198 IN denotes in
T16034 1184-1195 VBN denotes compromised
T16033 1181-1183 VBZ denotes is
T16032 1174-1180 NNP denotes SIGIRR
T16031 1171-1173 IN denotes of
T16030 1162-1170 NN denotes function
T16029 1158-1161 DT denotes the
T16028 1150-1157 IN denotes whether
R10438 T15830 T15847 nsubj Single-immunoglobulin,is
R10439 T15831 T15833 amod IL-1,protein
R10440 T15832 T15833 amod receptor-related,protein
R10441 T15833 T15847 nsubj protein,is
R10442 T15834 T15840 nmod Single-immunoglobulin,protein
R10443 T15835 T15836 compound IL-1,receptor-related
R10444 T15836 T15840 compound receptor-related,protein
R10445 T15837 T15838 punct (,SIGIRR
R10446 T15838 T15836 appos SIGIRR,receptor-related
R10447 T15839 T15838 punct ),SIGIRR
R10448 T15840 T15833 appos protein,protein
R10449 T15841 T15840 punct ",",protein
R10450 T15842 T15843 advmod also,known
R10451 T15843 T15833 acl known,protein
R10452 T15844 T15843 prep as,known
R10453 T15845 T15844 pobj TIR-8,as
R10454 T15846 T15833 punct ",",protein
R10455 T15847 T15847 ROOT is,is
R10456 T15848 T15849 det a,member
R10457 T15849 T15847 attr member,is
R10458 T15850 T15849 prep of,member
R10459 T15851 T15855 det the,family
R10460 T15852 T15855 compound TLR/IL,family
R10461 T15853 T15854 nummod -1,R
R10462 T15854 T15855 compound R,family
R10463 T15855 T15850 pobj family,of
R10464 T15856 T15860 nsubjpass that,characterised
R10465 T15857 T15860 aux has,characterised
R10466 T15858 T15860 auxpass been,characterised
R10467 T15859 T15860 advmod extensively,characterised
R10468 T15860 T15855 relcl characterised,family
R10469 T15861 T15860 prep as,characterised
R10470 T15862 T15863 det an,inhibitor
R10471 T15863 T15861 pobj inhibitor,as
R10472 T15864 T15863 prep of,inhibitor
R10473 T15865 T15864 pobj IL-1R,of
R10474 T15866 T15865 cc and,IL-1R
R10475 T15867 T15868 compound TLR,signalling
R10476 T15868 T15865 conj signalling,IL-1R
R10477 T15869 T15847 punct ",",is
R10478 T15870 T15871 advmod probably,through
R10479 T15871 T15847 prep through,is
R10480 T15872 T15873 amod direct,interaction
R10481 T15873 T15871 pobj interaction,through
R10482 T15874 T15873 prep with,interaction
R10483 T15875 T15876 det these,receptors
R10484 T15876 T15874 pobj receptors,with
R10485 T15877 T15873 punct ",",interaction
R10486 T15878 T15873 conj MyD88,interaction
R10487 T15879 T15878 punct ",",MyD88
R10488 T15880 T15878 conj IRAK1,MyD88
R10489 T15881 T15880 cc or,IRAK1
R10490 T15882 T15883 compound TRAF6,[
R10491 T15883 T15880 conj [,IRAK1
R10492 T15884 T15885 nummod 67,]
R10493 T15885 T15880 conj ],IRAK1
R10494 T15886 T15887 punct (,Figure
R10495 T15887 T15885 appos Figure,]
R10496 T15888 T15887 nummod 1,Figure
R10497 T15889 T15887 punct ),Figure
R10498 T15890 T15847 punct .,is
R10499 T15891 T15904 prep Given,observed
R10500 T15892 T15894 det the,role
R10501 T15893 T15894 amod important,role
R10502 T15894 T15891 pobj role,Given
R10503 T15895 T15894 prep of,role
R10504 T15896 T15895 pobj IL-1R,of
R10505 T15897 T15896 cc and,IL-1R
R10506 T15898 T15896 conj TLR,IL-1R
R10507 T15899 T15894 acl signalling,role
R10508 T15900 T15899 prep in,signalling
R10509 T15901 T15903 det the,inflammation
R10510 T15902 T15903 amod chronic,inflammation
R10511 T15903 T15900 pobj inflammation,in
R10512 T15904 T15904 ROOT observed,observed
R10513 T15905 T15904 prep in,observed
R10514 T15906 T15907 compound RA,[
R10515 T15907 T15905 pobj [,in
R10516 T15908 T15909 nummod 68,]
R10517 T15909 T15918 nsubj ],is
R10518 T15910 T15909 punct ",",]
R10519 T15911 T15913 det a,role
R10520 T15912 T15913 amod regulatory,role
R10521 T15913 T15909 appos role,]
R10522 T15914 T15913 prep for,role
R10523 T15915 T15914 pobj SIGIRR,for
R10524 T15916 T15913 prep in,role
R10525 T15917 T15916 pobj RA,in
R10526 T15918 T15904 ccomp is,observed
R10527 T15919 T15918 neg not,is
R10528 T15920 T15918 acomp unlikely,is
R10529 T15921 T15904 punct .,observed
R10530 T15922 T15923 nsubj SIGIRR,has
R10531 T15923 T15923 ROOT has,has
R10532 T15924 T15928 det a,pattern
R10533 T15925 T15926 advmod very,restricted
R10534 T15926 T15928 amod restricted,pattern
R10535 T15927 T15928 compound expression,pattern
R10536 T15928 T15923 dobj pattern,has
R10537 T15929 T15928 punct ",",pattern
R10538 T15930 T15931 auxpass being,expressed
R10539 T15931 T15928 acl expressed,pattern
R10540 T15932 T15931 prep in,expressed
R10541 T15933 T15934 amod epithelial,cells
R10542 T15934 T15932 pobj cells,in
R10543 T15935 T15934 punct ",",cells
R10544 T15936 T15934 conj monocytes,cells
R10545 T15937 T15936 cc and,monocytes
R10546 T15938 T15940 amod immature,cells
R10547 T15939 T15940 amod dendritic,cells
R10548 T15940 T15936 conj cells,monocytes
R10549 T15941 T15931 punct ",",expressed
R10550 T15942 T15931 cc but,expressed
R10551 T15943 T15944 neg not,in
R10552 T15944 T15923 prep in,has
R10553 T15945 T15946 amod mature,macro-phages
R10554 T15946 T15944 pobj macro-phages,in
R10555 T15947 T15949 compound [,]
R10556 T15948 T15949 compound "69,70",]
R10557 T15949 T15944 conj ],in
R10558 T15950 T15923 punct .,has
R10559 T15951 T15956 advmod Recently,shown
R10560 T15952 T15956 punct ",",shown
R10561 T15953 T15954 compound SIGIRR,overexpression
R10562 T15954 T15956 nsubjpass overexpression,shown
R10563 T15955 T15956 auxpass was,shown
R10564 T15956 T15956 ROOT shown,shown
R10565 T15957 T15958 aux to,inhibit
R10566 T15958 T15956 xcomp inhibit,shown
R10567 T15959 T15961 det the,release
R10568 T15960 T15961 amod spontaneous,release
R10569 T15961 T15958 dobj release,inhibit
R10570 T15962 T15961 prep of,release
R10571 T15963 T15964 amod inflammatory,cytokines
R10572 T15964 T15962 pobj cytokines,of
R10573 T15965 T15961 prep by,release
R10574 T15966 T15969 amod human,cells
R10575 T15967 T15969 nmod RA,cells
R10576 T15968 T15969 amod synovial,cells
R10577 T15969 T15965 pobj cells,by
R10578 T15970 T15956 punct .,shown
R10579 T15971 T15973 det This,function
R10580 T15972 T15973 amod inhibitory,function
R10581 T15973 T15978 nsubjpass function,confirmed
R10582 T15974 T15973 prep of,function
R10583 T15975 T15974 pobj SIGIRR,of
R10584 T15976 T15978 auxpass was,confirmed
R10585 T15977 T15978 advmod further,confirmed
R10586 T15978 T15978 ROOT confirmed,confirmed
R10587 T15979 T15978 prep in,confirmed
R10588 T15980 T15979 pobj vivo,in
R10589 T15981 T15978 punct ",",confirmed
R10590 T15982 T15985 mark since,developed
R10591 T15983 T15984 amod SIGIRR-deficient,mice
R10592 T15984 T15985 nsubj mice,developed
R10593 T15985 T15978 advcl developed,confirmed
R10594 T15986 T15989 det a,disease
R10595 T15987 T15988 advmod more,severe
R10596 T15988 T15989 amod severe,disease
R10597 T15989 T15985 dobj disease,developed
R10598 T15990 T15989 prep in,disease
R10599 T15991 T15992 amod zymosan-induced,arthritis
R10600 T15992 T15990 pobj arthritis,in
R10601 T15993 T15989 punct ",",disease
R10602 T15994 T15996 advmod as,as
R10603 T15995 T15996 advmod well,as
R10604 T15996 T15989 cc as,disease
R10605 T15997 T16000 amod collagen-induced,models
R10606 T15998 T15999 compound arthritis,mouse
R10607 T15999 T16000 compound mouse,models
R10608 T16000 T15989 conj models,disease
R10609 T16001 T16001 ROOT [,[
R10610 T16002 T16003 nummod 70,]
R10611 T16003 T16003 ROOT ],]
R10612 T16004 T15978 punct .,confirmed
R10613 T16005 T16007 nsubj It,be
R10614 T16006 T16007 aux will,be
R10615 T16007 T16007 ROOT be,be
R10616 T16008 T16007 acomp interesting,be
R10617 T16009 T16010 aux to,compare
R10618 T16010 T16007 xcomp compare,be
R10619 T16011 T16012 det the,expression
R10620 T16012 T16010 dobj expression,compare
R10621 T16013 T16012 prep of,expression
R10622 T16014 T16013 pobj SIGIRR,of
R10623 T16015 T16010 prep in,compare
R10624 T16016 T16017 compound RA,patients
R10625 T16017 T16015 pobj patients,in
R10626 T16018 T16010 prep with,compare
R10627 T16019 T16020 poss its,expression
R10628 T16020 T16018 pobj expression,with
R10629 T16021 T16020 prep in,expression
R10630 T16022 T16023 compound control,patients
R10631 T16023 T16021 pobj patients,in
R10632 T16024 T16020 punct ",",expression
R10633 T16025 T16010 cc or,compare
R10634 T16026 T16027 aux to,investigate
R10635 T16027 T16010 conj investigate,compare
R10636 T16028 T16034 mark whether,compromised
R10637 T16029 T16030 det the,function
R10638 T16030 T16034 nsubjpass function,compromised
R10639 T16031 T16030 prep of,function
R10640 T16032 T16031 pobj SIGIRR,of
R10641 T16033 T16034 auxpass is,compromised
R10642 T16034 T16027 ccomp compromised,investigate
R10643 T16035 T16034 prep in,compromised
R10644 T16036 T16037 compound RA,patients
R10645 T16037 T16035 pobj patients,in
R10646 T16038 T16007 punct .,be
R10647 T16039 T16049 prep Because,be
R10648 T16040 T16039 pcomp of,Because
R10649 T16041 T16044 poss its,pattern
R10650 T16042 T16044 amod restricted,pattern
R10651 T16043 T16044 compound expression,pattern
R10652 T16044 T16039 pobj pattern,Because
R10653 T16045 T16049 punct ",",be
R10654 T16046 T16049 nsubj SIGIRR,be
R10655 T16047 T16049 aux may,be
R10656 T16048 T16049 advmod also,be
R10657 T16049 T16049 ROOT be,be
R10658 T16050 T16053 det an,target
R10659 T16051 T16053 amod interesting,target
R10660 T16052 T16053 amod therapeutic,target
R10661 T16053 T16049 attr target,be
R10662 T16054 T16049 prep in,be
R10663 T16055 T16054 pobj RA,in
R10664 T16056 T16049 punct .,be

DLUT931

Id Subject Object Predicate Lexical cue
T16109 1238-1248 Gene_expression denotes expression
T16108 1184-1195 Negative_regulation denotes compromised
T16107 1055-1065 Gene_expression denotes expression
T16106 883-892 Negative_regulation denotes deficient
T16105 690-704 Positive_regulation denotes overexpression
T16104 562-571 Gene_expression denotes expressed
T16103 536-546 Gene_expression denotes expression
T16102 280-291 Binding denotes interaction
T16101 217-226 Negative_regulation denotes inhibitor
T16100 1258-1264 Protein denotes SIGIRR
T16099 1174-1180 Protein denotes SIGIRR
T16098 1069-1075 Protein denotes SIGIRR
T16097 876-882 Protein denotes SIGIRR
T16096 832-838 Protein denotes SIGIRR
T16095 683-689 Protein denotes SIGIRR
T16094 507-513 Protein denotes SIGIRR
T16093 381-386 Protein denotes IL-1R
T16092 477-483 Protein denotes SIGIRR
T16091 330-335 Protein denotes TRAF6
T16090 321-326 Protein denotes IRAK1
T16089 314-319 Protein denotes MyD88
T16088 230-235 Protein denotes IL-1R
T16087 128-133 Protein denotes TIR-8
T16086 97-103 Protein denotes SIGIRR
T16085 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T16084 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
R10680 T16088 T16101 themeOf IL-1R,inhibitor
R10681 T16088 T16102 themeOf IL-1R,interaction
R10682 T16088 T16102 themeOf IL-1R,interaction
R10683 T16088 T16102 themeOf IL-1R,interaction
R10684 T16089 T16101 themeOf MyD88,inhibitor
R10685 T16090 T16101 themeOf IRAK1,inhibitor
R10686 T16091 T16101 themeOf TRAF6,inhibitor
R10687 T16094 T16103 themeOf SIGIRR,expression
R10688 T16094 T16104 themeOf SIGIRR,expressed
R10689 T16095 T16105 themeOf SIGIRR,overexpression
R10690 T16097 T16106 themeOf SIGIRR,deficient
R10691 T16098 T16107 themeOf SIGIRR,expression
R10692 T16099 T16108 themeOf SIGIRR,compromised
R10693 T16100 T16109 themeOf SIGIRR,expression
R10694 T16102 T16101 themeOf interaction,inhibitor
R10695 T16102 T16101 themeOf interaction,inhibitor
R10696 T16102 T16101 themeOf interaction,inhibitor
R10677 T16085 T16102 themeOf Single-immunoglobulin IL-1 receptor-related,interaction
R10678 T16086 T16102 themeOf SIGIRR,interaction
R10679 T16087 T16102 themeOf TIR-8,interaction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T16058 330-335 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6
T16057 314-319 http://www.uniprot.org/uniprot/Q99836 denotes MyD88

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15546 1258-1264 Protein denotes SIGIRR
T15545 1174-1180 Protein denotes SIGIRR
T15544 1069-1075 Protein denotes SIGIRR
T15543 876-882 Protein denotes SIGIRR
T15542 832-838 Protein denotes SIGIRR
T15541 683-689 Protein denotes SIGIRR
T15540 507-513 Protein denotes SIGIRR
T15539 477-483 Protein denotes SIGIRR
T15538 381-386 Protein denotes IL-1R
T15537 330-335 Protein denotes TRAF6
T15536 321-326 Protein denotes IRAK1
T15535 314-319 Protein denotes MyD88
T15534 230-235 Protein denotes IL-1R
T15533 128-133 Protein denotes TIR-8
T15532 97-103 Protein denotes SIGIRR
T15531 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15530 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T15529 1258-1264 Antecedent denotes SIGIRR
T15528 1223-1226 Anaphor denotes its
T15527 1069-1075 Antecedent denotes SIGIRR
T15526 1096-1099 Anaphor denotes its
T15525 230-235 Antecedent denotes IL-1R
T15524 297-312 Anaphor denotes these receptors
T15523 128-133 Antecedent denotes TIR-8
T15522 171-175 Anaphor denotes that
R10198 T15522 T15523 boundBy that,TIR-8
R10199 T15524 T15525 boundBy these receptors,IL-1R
R10200 T15526 T15527 boundBy its,SIGIRR
R10201 T15528 T15529 boundBy its,SIGIRR

2_test

Id Subject Object Predicate Lexical cue
21639951-12925853-4289498 337-339 12925853 denotes 67
21639951-19835640-4289499 450-452 19835640 denotes 68
21639951-14715412-4289500 665-667 14715412 denotes 69
21639951-20506350-4289501 668-670 20506350 denotes 70
21639951-20506350-4289502 1012-1014 20506350 denotes 70

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15641 547-554 NN denotes pattern
T15640 536-546 NN denotes expression
T15639 525-535 JJ denotes restricted
T15638 520-524 RB denotes very
T15637 518-519 DT denotes a
T15636 514-517 VB denotes has
T15635 507-513 NN denotes SIGIRR
T15634 497-505 JJ denotes unlikely
T15633 493-496 RB denotes not
T15632 490-492 VB denotes is
T15631 487-489 NN denotes RA
T15630 484-486 IN denotes in
T15629 477-483 NN denotes SIGIRR
T15628 473-476 IN denotes for
T15627 468-472 NN denotes role
T15626 457-467 JJ denotes regulatory
T15625 455-456 DT denotes a
T15624 453-454 -COMMA- denotes ,
T15623 452-453 -RRB- denotes ]
T15622 450-452 CD denotes 68
T15621 449-450 -LRB- denotes [
T15620 446-448 NN denotes RA
T15619 443-445 IN denotes in
T15618 434-442 VB denotes observed
T15617 421-433 NN denotes inflammation
T15616 413-420 JJ denotes chronic
T15615 409-412 DT denotes the
T15614 406-408 IN denotes in
T15613 395-405 NN denotes signalling
T15612 391-394 NN denotes TLR
T15611 387-390 CC denotes and
T15610 381-386 NN denotes IL-1R
T15609 378-380 IN denotes of
T15608 373-377 NN denotes role
T15607 363-372 JJ denotes important
T15606 359-362 DT denotes the
T15605 353-358 VB denotes Given
T15604 350-351 -RRB- denotes )
T15603 349-350 CD denotes 1
T15602 342-348 NN denotes Figure
T15601 341-342 -LRB- denotes (
T15600 339-340 -RRB- denotes ]
T15599 337-339 CD denotes 67
T15598 336-337 -LRB- denotes [
T15597 330-335 NN denotes TRAF6
T15596 327-329 CC denotes or
T15595 321-326 NN denotes IRAK1
T15594 319-320 -COMMA- denotes ,
T15593 314-319 NN denotes MyD88
T15592 312-313 -COMMA- denotes ,
T15591 303-312 NN denotes receptors
T15590 297-302 DT denotes these
T15589 292-296 IN denotes with
T15588 280-291 NN denotes interaction
T15587 273-279 JJ denotes direct
T15586 265-272 IN denotes through
T15585 256-264 RB denotes probably
T15584 254-255 -COMMA- denotes ,
T15583 244-254 NN denotes signalling
T15582 240-243 NN denotes TLR
T15581 236-239 CC denotes and
T15580 230-235 NN denotes IL-1R
T15579 227-229 IN denotes of
T15578 217-226 NN denotes inhibitor
T15577 214-216 DT denotes an
T15576 211-213 IN denotes as
T15575 197-210 VB denotes characterised
T15574 185-196 RB denotes extensively
T15573 180-184 VB denotes been
T15572 176-179 VB denotes has
T15571 171-175 WDT denotes that
T15570 164-170 NN denotes family
T15569 154-163 NN denotes TLR/IL-1R
T15568 150-153 DT denotes the
T15567 147-149 IN denotes of
T15566 140-146 NN denotes member
T15565 138-139 DT denotes a
T15564 135-137 VB denotes is
T15563 133-134 -COMMA- denotes ,
T15562 128-133 NN denotes TIR-8
T15561 125-127 IN denotes as
T15560 119-124 VB denotes known
T15559 114-118 RB denotes also
T15558 112-113 -COMMA- denotes ,
T15557 105-112 NN denotes protein
T15556 103-104 -RRB- denotes )
T15555 97-103 NN denotes SIGIRR
T15554 96-97 -LRB- denotes (
T15553 79-95 JJ denotes receptor-related
T15552 74-78 NN denotes IL-1
T15551 52-73 JJ denotes Single-immunoglobulin
T15550 44-51 NN denotes protein
T15549 27-43 JJ denotes receptor-related
T15547 0-21 JJ denotes Single-immunoglobulin
T15764 1314-1316 NN denotes RA
T15763 1311-1313 IN denotes in
T15762 1304-1310 NN denotes target
T15761 1292-1303 JJ denotes therapeutic
T15760 1280-1291 JJ denotes interesting
T15759 1277-1279 DT denotes an
T15758 1274-1276 VB denotes be
T15757 1269-1273 RB denotes also
T15756 1265-1268 MD denotes may
T15755 1258-1264 NN denotes SIGIRR
T15754 1256-1257 -COMMA- denotes ,
T15753 1249-1256 NN denotes pattern
T15752 1238-1248 NN denotes expression
T15751 1227-1237 JJ denotes restricted
T15750 1223-1226 PRP-DOLLAR- denotes its
T15749 1220-1222 IN denotes of
T15748 1212-1219 IN denotes Because
T15747 1202-1210 NN denotes patients
T15746 1199-1201 NN denotes RA
T15745 1196-1198 IN denotes in
T15744 1184-1195 VB denotes compromised
T15743 1181-1183 VB denotes is
T15742 1174-1180 NN denotes SIGIRR
T15741 1171-1173 IN denotes of
T15740 1162-1170 NN denotes function
T15739 1158-1161 DT denotes the
T15738 1150-1157 IN denotes whether
T15737 1138-1149 VB denotes investigate
T15736 1135-1137 TO denotes to
T15735 1132-1134 CC denotes or
T15734 1130-1131 -COMMA- denotes ,
T15733 1122-1130 NN denotes patients
T15732 1114-1121 NN denotes control
T15731 1111-1113 IN denotes in
T15730 1100-1110 NN denotes expression
T15729 1096-1099 PRP-DOLLAR- denotes its
T15728 1091-1095 IN denotes with
T15727 1082-1090 NN denotes patients
T15726 1079-1081 NN denotes RA
T15725 1076-1078 IN denotes in
T15724 1069-1075 NN denotes SIGIRR
T15723 1066-1068 IN denotes of
T15722 1055-1065 NN denotes expression
T15721 1051-1054 DT denotes the
T15720 1043-1050 VB denotes compare
T15719 1040-1042 TO denotes to
T15718 1028-1039 JJ denotes interesting
T15717 1025-1027 VB denotes be
T15716 1020-1024 MD denotes will
T15715 1017-1019 PRP denotes It
T15714 1014-1015 -RRB- denotes ]
T15713 1012-1014 CD denotes 70
T15712 1011-1012 -LRB- denotes [
T15711 1004-1010 NN denotes models
T15710 998-1003 NN denotes mouse
T15709 988-997 NN denotes arthritis
T15708 971-987 JJ denotes collagen-induced
T15707 968-970 IN denotes as
T15706 963-967 RB denotes well
T15705 960-962 RB denotes as
T15704 958-959 -COMMA- denotes ,
T15703 949-958 NN denotes arthritis
T15702 933-948 JJ denotes zymosan-induced
T15701 930-932 IN denotes in
T15700 922-929 NN denotes disease
T15699 915-921 JJ denotes severe
T15698 910-914 RB denotes more
T15697 908-909 DT denotes a
T15696 898-907 VB denotes developed
T15695 893-897 NN denotes mice
T15694 876-892 JJ denotes SIGIRR-deficient
T15693 870-875 IN denotes since
T15692 868-869 -COMMA- denotes ,
T15691 864-868 FW denotes vivo
T15690 861-863 FW denotes in
T15689 851-860 VB denotes confirmed
T15688 843-850 RB denotes further
T15687 839-842 VB denotes was
T15686 832-838 NN denotes SIGIRR
T15685 829-831 IN denotes of
T15684 820-828 NN denotes function
T15683 809-819 JJ denotes inhibitory
T15682 804-808 DT denotes This
T15681 797-802 NN denotes cells
T15680 788-796 JJ denotes synovial
T15679 785-787 NN denotes RA
T15678 779-784 JJ denotes human
T15677 776-778 IN denotes by
T15676 766-775 NN denotes cytokines
T15675 753-765 JJ denotes inflammatory
T15674 750-752 IN denotes of
T15673 742-749 NN denotes release
T15672 730-741 JJ denotes spontaneous
T15671 726-729 DT denotes the
T15670 718-725 VB denotes inhibit
T15669 715-717 TO denotes to
T15668 709-714 VB denotes shown
T15667 705-708 VB denotes was
T15666 690-704 NN denotes overexpression
T15665 683-689 NN denotes SIGIRR
T15664 681-682 -COMMA- denotes ,
T15663 673-681 RB denotes Recently
T15662 670-671 -RRB- denotes ]
T15661 665-670 CD denotes 69,70
T15660 664-665 -LRB- denotes [
T15659 651-663 NN denotes macro-phages
T15658 644-650 JJ denotes mature
T15657 641-643 IN denotes in
T15656 637-640 RB denotes not
T15655 633-636 CC denotes but
T15654 631-632 -COMMA- denotes ,
T15653 626-631 NN denotes cells
T15652 616-625 JJ denotes dendritic
T15651 607-615 JJ denotes immature
T15650 603-606 CC denotes and
T15649 593-602 NN denotes monocytes
T15648 591-592 -COMMA- denotes ,
T15647 586-591 NN denotes cells
T15646 575-585 JJ denotes epithelial
T15645 572-574 IN denotes in
T15644 562-571 VB denotes expressed
T15643 556-561 VB denotes being
T15642 554-555 -COMMA- denotes ,
T15548 22-26 NN denotes IL-1
R10202 T15550 T15547 arg1Of protein,Single-immunoglobulin
R10203 T15550 T15548 arg1Of protein,IL-1
R10204 T15550 T15549 arg1Of protein,receptor-related
R10205 T15555 T15554 arg2Of SIGIRR,(
R10206 T15556 T15554 arg3Of ),(
R10207 T15557 T15551 arg1Of protein,Single-immunoglobulin
R10208 T15557 T15552 arg1Of protein,IL-1
R10209 T15557 T15553 arg1Of protein,receptor-related
R10210 T15557 T15554 arg1Of protein,(
R10211 T15557 T15558 arg1Of protein,","
R10212 T15557 T15559 arg1Of protein,also
R10213 T15557 T15560 arg2Of protein,known
R10214 T15557 T15564 arg1Of protein,is
R10215 T15560 T15561 arg1Of known,as
R10216 T15562 T15561 arg2Of TIR-8,as
R10217 T15564 T15563 arg1Of is,","
R10218 T15566 T15564 arg2Of member,is
R10219 T15566 T15565 arg1Of member,a
R10220 T15566 T15567 arg1Of member,of
R10221 T15570 T15567 arg2Of family,of
R10222 T15570 T15568 arg1Of family,the
R10223 T15570 T15569 arg1Of family,TLR/IL-1R
R10224 T15570 T15571 arg1Of family,that
R10225 T15570 T15572 arg1Of family,has
R10226 T15570 T15573 arg1Of family,been
R10227 T15570 T15575 arg2Of family,characterised
R10228 T15575 T15572 arg2Of characterised,has
R10229 T15575 T15573 arg2Of characterised,been
R10230 T15575 T15574 arg1Of characterised,extensively
R10231 T15575 T15576 arg1Of characterised,as
R10232 T15575 T15584 arg1Of characterised,","
R10233 T15575 T15586 arg1Of characterised,through
R10234 T15575 T15598 arg1Of characterised,[
R10235 T15575 T15601 arg1Of characterised,(
R10236 T15578 T15576 arg2Of inhibitor,as
R10237 T15578 T15577 arg1Of inhibitor,an
R10238 T15578 T15579 arg1Of inhibitor,of
R10239 T15580 T15581 arg1Of IL-1R,and
R10240 T15582 T15581 arg2Of TLR,and
R10241 T15583 T15579 arg2Of signalling,of
R10242 T15583 T15580 arg1Of signalling,IL-1R
R10243 T15583 T15582 arg1Of signalling,TLR
R10244 T15586 T15585 arg1Of through,probably
R10245 T15588 T15587 arg1Of interaction,direct
R10246 T15588 T15589 arg1Of interaction,with
R10247 T15588 T15594 arg1Of interaction,","
R10248 T15591 T15589 arg2Of receptors,with
R10249 T15591 T15590 arg1Of receptors,these
R10250 T15591 T15592 arg1Of receptors,","
R10251 T15593 T15592 arg2Of MyD88,","
R10252 T15594 T15596 arg1Of ",",or
R10253 T15595 T15594 arg2Of IRAK1,","
R10254 T15596 T15586 arg2Of or,through
R10255 T15597 T15596 arg2Of TRAF6,or
R10256 T15599 T15598 arg2Of 67,[
R10257 T15600 T15598 arg3Of ],[
R10258 T15602 T15601 arg2Of Figure,(
R10259 T15602 T15603 arg1Of Figure,1
R10260 T15604 T15601 arg3Of ),(
R10261 T15608 T15605 arg2Of role,Given
R10262 T15608 T15606 arg1Of role,the
R10263 T15608 T15607 arg1Of role,important
R10264 T15608 T15609 arg1Of role,of
R10265 T15608 T15614 arg1Of role,in
R10266 T15610 T15611 arg1Of IL-1R,and
R10267 T15612 T15611 arg2Of TLR,and
R10268 T15613 T15609 arg2Of signalling,of
R10269 T15613 T15610 arg1Of signalling,IL-1R
R10270 T15613 T15612 arg1Of signalling,TLR
R10271 T15617 T15614 arg2Of inflammation,in
R10272 T15617 T15615 arg1Of inflammation,the
R10273 T15617 T15616 arg1Of inflammation,chronic
R10274 T15617 T15618 arg2Of inflammation,observed
R10275 T15618 T15619 arg1Of observed,in
R10276 T15620 T15619 arg2Of RA,in
R10277 T15620 T15621 arg1Of RA,[
R10278 T15622 T15621 arg2Of 68,[
R10279 T15623 T15621 arg3Of ],[
R10280 T15627 T15625 arg1Of role,a
R10281 T15627 T15626 arg1Of role,regulatory
R10282 T15627 T15628 arg1Of role,for
R10283 T15627 T15630 arg1Of role,in
R10284 T15627 T15632 arg1Of role,is
R10285 T15627 T15634 arg1Of role,unlikely
R10286 T15629 T15628 arg2Of SIGIRR,for
R10287 T15631 T15630 arg2Of RA,in
R10288 T15632 T15605 arg1Of is,Given
R10289 T15632 T15624 arg1Of is,","
R10290 T15632 T15633 arg1Of is,not
R10291 T15634 T15632 arg2Of unlikely,is
R10292 T15635 T15636 arg1Of SIGIRR,has
R10293 T15635 T15643 arg1Of SIGIRR,being
R10294 T15635 T15644 arg2Of SIGIRR,expressed
R10295 T15636 T15642 arg1Of has,","
R10296 T15639 T15638 arg1Of restricted,very
R10297 T15641 T15636 arg2Of pattern,has
R10298 T15641 T15637 arg1Of pattern,a
R10299 T15641 T15639 arg1Of pattern,restricted
R10300 T15641 T15640 arg1Of pattern,expression
R10301 T15644 T15642 arg2Of expressed,","
R10302 T15644 T15643 arg2Of expressed,being
R10303 T15644 T15645 arg1Of expressed,in
R10304 T15644 T15657 arg1Of expressed,in
R10305 T15644 T15660 arg1Of expressed,[
R10306 T15645 T15655 arg1Of in,but
R10307 T15647 T15646 arg1Of cells,epithelial
R10308 T15647 T15648 arg1Of cells,","
R10309 T15648 T15650 arg1Of ",",and
R10310 T15649 T15648 arg2Of monocytes,","
R10311 T15650 T15645 arg2Of and,in
R10312 T15653 T15650 arg2Of cells,and
R10313 T15653 T15651 arg1Of cells,immature
R10314 T15653 T15652 arg1Of cells,dendritic
R10315 T15655 T15654 arg1Of but,","
R10316 T15657 T15655 arg2Of in,but
R10317 T15657 T15656 arg1Of in,not
R10318 T15659 T15657 arg2Of macro-phages,in
R10319 T15659 T15658 arg1Of macro-phages,mature
R10320 T15661 T15660 arg2Of "69,70",[
R10321 T15662 T15660 arg3Of ],[
R10322 T15666 T15665 arg1Of overexpression,SIGIRR
R10323 T15666 T15667 arg1Of overexpression,was
R10324 T15666 T15668 arg2Of overexpression,shown
R10325 T15666 T15670 arg1Of overexpression,inhibit
R10326 T15668 T15663 arg1Of shown,Recently
R10327 T15668 T15664 arg1Of shown,","
R10328 T15668 T15667 arg2Of shown,was
R10329 T15670 T15668 arg3Of inhibit,shown
R10330 T15670 T15669 arg1Of inhibit,to
R10331 T15673 T15670 arg2Of release,inhibit
R10332 T15673 T15671 arg1Of release,the
R10333 T15673 T15672 arg1Of release,spontaneous
R10334 T15673 T15674 arg1Of release,of
R10335 T15673 T15677 arg1Of release,by
R10336 T15676 T15674 arg2Of cytokines,of
R10337 T15676 T15675 arg1Of cytokines,inflammatory
R10338 T15681 T15677 arg2Of cells,by
R10339 T15681 T15678 arg1Of cells,human
R10340 T15681 T15679 arg1Of cells,RA
R10341 T15681 T15680 arg1Of cells,synovial
R10342 T15684 T15682 arg1Of function,This
R10343 T15684 T15683 arg1Of function,inhibitory
R10344 T15684 T15685 arg1Of function,of
R10345 T15684 T15687 arg1Of function,was
R10346 T15684 T15689 arg2Of function,confirmed
R10347 T15686 T15685 arg2Of SIGIRR,of
R10348 T15689 T15687 arg2Of confirmed,was
R10349 T15689 T15688 arg1Of confirmed,further
R10350 T15689 T15691 arg1Of confirmed,vivo
R10351 T15689 T15692 arg1Of confirmed,","
R10352 T15689 T15693 arg1Of confirmed,since
R10353 T15691 T15690 arg1Of vivo,in
R10354 T15695 T15694 arg1Of mice,SIGIRR-deficient
R10355 T15695 T15696 arg1Of mice,developed
R10356 T15696 T15693 arg2Of developed,since
R10357 T15696 T15712 arg1Of developed,[
R10358 T15699 T15698 arg1Of severe,more
R10359 T15700 T15697 arg1Of disease,a
R10360 T15700 T15699 arg1Of disease,severe
R10361 T15700 T15701 arg1Of disease,in
R10362 T15700 T15707 arg1Of disease,as
R10363 T15703 T15701 arg2Of arthritis,in
R10364 T15703 T15702 arg1Of arthritis,zymosan-induced
R10365 T15707 T15696 arg2Of as,developed
R10366 T15707 T15704 arg1Of as,","
R10367 T15707 T15705 arg1Of as,as
R10368 T15707 T15706 arg1Of as,well
R10369 T15711 T15707 arg2Of models,as
R10370 T15711 T15708 arg1Of models,collagen-induced
R10371 T15711 T15709 arg1Of models,arthritis
R10372 T15711 T15710 arg1Of models,mouse
R10373 T15713 T15712 arg2Of 70,[
R10374 T15714 T15712 arg3Of ],[
R10375 T15717 T15716 arg2Of be,will
R10376 T15718 T15717 arg2Of interesting,be
R10377 T15720 T15719 arg1Of compare,to
R10378 T15720 T15735 arg1Of compare,or
R10379 T15722 T15720 arg2Of expression,compare
R10380 T15722 T15721 arg1Of expression,the
R10381 T15722 T15723 arg1Of expression,of
R10382 T15722 T15725 arg1Of expression,in
R10383 T15724 T15723 arg2Of SIGIRR,of
R10384 T15727 T15725 arg2Of patients,in
R10385 T15727 T15726 arg1Of patients,RA
R10386 T15727 T15728 arg1Of patients,with
R10387 T15730 T15728 arg2Of expression,with
R10388 T15730 T15729 arg1Of expression,its
R10389 T15730 T15731 arg1Of expression,in
R10390 T15733 T15731 arg2Of patients,in
R10391 T15733 T15732 arg1Of patients,control
R10392 T15735 T15715 arg1Of or,It
R10393 T15735 T15716 arg1Of or,will
R10394 T15735 T15717 arg1Of or,be
R10395 T15735 T15718 arg1Of or,interesting
R10396 T15735 T15734 arg1Of or,","
R10397 T15737 T15735 arg2Of investigate,or
R10398 T15737 T15736 arg1Of investigate,to
R10399 T15740 T15739 arg1Of function,the
R10400 T15740 T15741 arg1Of function,of
R10401 T15740 T15743 arg1Of function,is
R10402 T15740 T15744 arg2Of function,compromised
R10403 T15742 T15741 arg2Of SIGIRR,of
R10404 T15744 T15737 arg2Of compromised,investigate
R10405 T15744 T15738 arg1Of compromised,whether
R10406 T15744 T15743 arg2Of compromised,is
R10407 T15744 T15745 arg1Of compromised,in
R10408 T15747 T15745 arg2Of patients,in
R10409 T15747 T15746 arg1Of patients,RA
R10410 T15748 T15749 arg1Of Because,of
R10411 T15753 T15748 arg2Of pattern,Because
R10412 T15753 T15750 arg1Of pattern,its
R10413 T15753 T15751 arg1Of pattern,restricted
R10414 T15753 T15752 arg1Of pattern,expression
R10415 T15755 T15756 arg1Of SIGIRR,may
R10416 T15755 T15758 arg1Of SIGIRR,be
R10417 T15758 T15748 arg1Of be,Because
R10418 T15758 T15754 arg1Of be,","
R10419 T15758 T15756 arg2Of be,may
R10420 T15758 T15757 arg1Of be,also
R10421 T15762 T15758 arg2Of target,be
R10422 T15762 T15759 arg1Of target,an
R10423 T15762 T15760 arg1Of target,interesting
R10424 T15762 T15761 arg1Of target,therapeutic
R10425 T15762 T15763 arg1Of target,in
R10426 T15764 T15763 arg2Of RA,in

UBERON-AE

Id Subject Object Predicate Lexical cue
T15483 185-196 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensively

GO-BP

Id Subject Object Predicate Lexical cue
T15772 421-433 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T15771 395-405 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T15770 244-254 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T15769 381-386 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15768 230-235 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15767 158-163 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15766 74-87 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1 receptor
T15765 22-35 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1 receptor

GO-MF

Id Subject Object Predicate Lexical cue
T15783 381-386 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15782 230-235 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15781 158-163 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1R
T15780 74-87 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1 receptor
T15779 22-35 http://purl.obolibrary.org/obo/GO_0004908 denotes IL-1 receptor
T15778 74-78 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T15777 22-26 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T15776 59-73 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin
T15775 7-21 http://purl.obolibrary.org/obo/GO_0003823 denotes immunoglobulin

GO-CC

Id Subject Object Predicate Lexical cue
T15786 797-802 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T15785 626-631 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T15784 586-591 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T15491 1212-1317 Sentence denotes Because of its restricted expression pattern, SIGIRR may also be an interesting therapeutic target in RA.
T15490 1017-1211 Sentence denotes It will be interesting to compare the expression of SIGIRR in RA patients with its expression in control patients, or to investigate whether the function of SIGIRR is compromised in RA patients.
T15489 804-1016 Sentence denotes This inhibitory function of SIGIRR was further confirmed in vivo, since SIGIRR-deficient mice developed a more severe disease in zymosan-induced arthritis, as well as collagen-induced arthritis mouse models [70].
T15488 673-803 Sentence denotes Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells.
T15487 507-672 Sentence denotes SIGIRR has a very restricted expression pattern, being expressed in epithelial cells, monocytes and immature dendritic cells, but not in mature macro-phages [69,70].
T15486 353-506 Sentence denotes Given the important role of IL-1R and TLR signalling in the chronic inflammation observed in RA [68], a regulatory role for SIGIRR in RA is not unlikely.
T15485 52-352 Sentence denotes Single-immunoglobulin IL-1 receptor-related (SIGIRR) protein, also known as TIR-8, is a member of the TLR/IL-1R family that has been extensively characterised as an inhibitor of IL-1R and TLR signalling, probably through direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1).
T15484 0-51 Sentence denotes Single-immunoglobulin IL-1 receptor-related protein
T152 0-51 Sentence denotes Single-immunoglobulin IL-1 receptor-related protein
T153 52-352 Sentence denotes Single-immunoglobulin IL-1 receptor-related (SIGIRR) protein, also known as TIR-8, is a member of the TLR/IL-1R family that has been extensively characterised as an inhibitor of IL-1R and TLR signalling, probably through direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1).
T154 353-506 Sentence denotes Given the important role of IL-1R and TLR signalling in the chronic inflammation observed in RA [68], a regulatory role for SIGIRR in RA is not unlikely.
T155 507-672 Sentence denotes SIGIRR has a very restricted expression pattern, being expressed in epithelial cells, monocytes and immature dendritic cells, but not in mature macro-phages [69,70].
T156 673-803 Sentence denotes Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells.
T157 804-1016 Sentence denotes This inhibitory function of SIGIRR was further confirmed in vivo, since SIGIRR-deficient mice developed a more severe disease in zymosan-induced arthritis, as well as collagen-induced arthritis mouse models [70].
T158 1017-1211 Sentence denotes It will be interesting to compare the expression of SIGIRR in RA patients with its expression in control patients, or to investigate whether the function of SIGIRR is compromised in RA patients.
T159 1212-1317 Sentence denotes Because of its restricted expression pattern, SIGIRR may also be an interesting therapeutic target in RA.

ICD10

Id Subject Object Predicate Lexical cue
T15774 988-997 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis
T15773 949-958 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

simple1

Id Subject Object Predicate Lexical cue
T15829 1258-1264 Protein denotes SIGIRR
T15828 1174-1180 Protein denotes SIGIRR
T15827 1069-1075 Protein denotes SIGIRR
T15826 876-882 Protein denotes SIGIRR
T15825 832-838 Protein denotes SIGIRR
T15824 683-689 Protein denotes SIGIRR
T15823 507-513 Protein denotes SIGIRR
T15822 477-483 Protein denotes SIGIRR
T15821 381-386 Protein denotes IL-1R
T15820 330-335 Protein denotes TRAF6
T15819 321-326 Protein denotes IRAK1
T15818 314-319 Protein denotes MyD88
T15817 230-235 Protein denotes IL-1R
T15816 128-133 Protein denotes TIR-8
T15815 97-103 Protein denotes SIGIRR
T15814 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15813 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16200 1238-1248 Gene_expression denotes expression
T16199 1304-1310 Regulation denotes target
T16198 1055-1065 Gene_expression denotes expression
T16197 883-892 Negative_regulation denotes deficient
T16196 690-704 Positive_regulation denotes overexpression
T16195 690-704 Gene_expression denotes overexpression
T16194 562-571 Gene_expression denotes expressed
T16193 280-291 Binding denotes interaction
T16192 217-226 Negative_regulation denotes inhibitor
T16191 1258-1264 Protein denotes SIGIRR
T16190 1174-1180 Protein denotes SIGIRR
T16189 1069-1075 Protein denotes SIGIRR
T16188 876-882 Protein denotes SIGIRR
T16187 832-838 Protein denotes SIGIRR
T16186 683-689 Protein denotes SIGIRR
T16185 507-513 Protein denotes SIGIRR
T16184 381-386 Protein denotes IL-1R
T16183 477-483 Protein denotes SIGIRR
T16182 330-335 Protein denotes TRAF6
T16181 321-326 Protein denotes IRAK1
T16180 314-319 Protein denotes MyD88
T16179 230-235 Protein denotes IL-1R
T16178 128-133 Protein denotes TIR-8
T16177 97-103 Protein denotes SIGIRR
T16176 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T16175 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
R10719 T16176 T16192 themeOf Single-immunoglobulin IL-1 receptor-related,inhibitor
R10720 T16176 T16193 themeOf Single-immunoglobulin IL-1 receptor-related,interaction
R10721 T16177 T16192 themeOf SIGIRR,inhibitor
R10722 T16177 T16193 themeOf SIGIRR,interaction
R10723 T16178 T16192 themeOf TIR-8,inhibitor
R10724 T16178 T16193 themeOf TIR-8,interaction
R10725 T16179 T16192 themeOf IL-1R,inhibitor
R10726 T16181 T16192 themeOf IRAK1,inhibitor
R10727 T16181 T16193 themeOf IRAK1,interaction
R10728 T16185 T16194 themeOf SIGIRR,expressed
R10729 T16186 T16195 themeOf SIGIRR,overexpression
R10730 T16188 T16197 themeOf SIGIRR,deficient
R10731 T16189 T16198 themeOf SIGIRR,expression
R10732 T16191 T16199 themeOf SIGIRR,target
R10733 T16191 T16200 themeOf SIGIRR,expression
R10734 T16195 T16196 themeOf overexpression,overexpression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16083 1238-1248 Gene_expression denotes expression
T16082 1304-1310 Regulation denotes target
T16081 1055-1065 Gene_expression denotes expression
T16080 883-892 Negative_regulation denotes deficient
T16079 690-704 Positive_regulation denotes overexpression
T16078 562-571 Gene_expression denotes expressed
T16077 217-226 Negative_regulation denotes inhibitor
T16076 280-291 Binding denotes interaction
T16075 1258-1264 Protein denotes SIGIRR
T16074 1174-1180 Protein denotes SIGIRR
T16073 1069-1075 Protein denotes SIGIRR
T16072 876-882 Protein denotes SIGIRR
T16064 314-319 Protein denotes MyD88
T16063 230-235 Protein denotes IL-1R
T16062 128-133 Protein denotes TIR-8
T16061 97-103 Protein denotes SIGIRR
T16060 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T16059 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
T16071 832-838 Protein denotes SIGIRR
T16070 683-689 Protein denotes SIGIRR
T16069 507-513 Protein denotes SIGIRR
T16068 381-386 Protein denotes IL-1R
T16067 477-483 Protein denotes SIGIRR
T16066 330-335 Protein denotes TRAF6
T16065 321-326 Protein denotes IRAK1
R10665 T16060 T16076 themeOf Single-immunoglobulin IL-1 receptor-related,interaction
R10666 T16061 T16076 themeOf SIGIRR,interaction
R10667 T16062 T16076 themeOf TIR-8,interaction
R10668 T16063 T16076 themeOf IL-1R,interaction
R10669 T16065 T16077 themeOf IRAK1,inhibitor
R10670 T16065 T16076 themeOf IRAK1,interaction
R10671 T16069 T16078 themeOf SIGIRR,expressed
R10672 T16070 T16079 themeOf SIGIRR,overexpression
R10673 T16072 T16080 themeOf SIGIRR,deficient
R10674 T16073 T16081 themeOf SIGIRR,expression
R10675 T16075 T16082 themeOf SIGIRR,target
R10676 T16075 T16083 themeOf SIGIRR,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16246 683-704 Gene_expression denotes SIGIRR overexpression
T16245 683-704 Positive_regulation denotes SIGIRR overexpression
T16244 673-802 Negative_regulation denotes Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells
T16243 673-802 Negative_regulation denotes Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells
T16242 726-802 Regulation denotes the spontaneous release of inflammatory cytokines by human RA synovial cells
T16241 1040-1121 Gene_expression denotes to compare the expression of SIGIRR in RA patients with its expression in control
T16240 273-351 Binding denotes direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1)
T16239 518-546 Negative_regulation denotes a very restricted expression
T16238 785-787 Protein denotes RA
T16237 297-312 Protein denotes these receptors
T16236 683-689 Protein denotes SIGIRR
T16235 230-235 Protein denotes IL-1R
T16234 128-134 Protein denotes TIR-8,
T16233 321-326 Protein denotes IRAK1
T16232 477-483 Protein denotes SIGIRR
T16231 158-163 Protein denotes IL-1R
T16230 1066-1075 Protein denotes of SIGIRR
T16229 7-21 Protein denotes immunoglobulin
T16228 507-513 Protein denotes SIGIRR
T16227 217-243 Entity denotes inhibitor of IL-1R and TLR
T16226 971-987 Entity denotes collagen-induced
T16225 22-26 Protein denotes IL-1
T16224 52-104 Protein denotes Single-immunoglobulin IL-1 receptor-related (SIGIRR)
T16223 1079-1081 Protein denotes RA
T16222 607-632 Entity denotes immature dendritic cells,
T16221 7-51 Protein denotes immunoglobulin IL-1 receptor-related protein
T16220 644-663 Entity denotes mature macro-phages
T16219 1171-1180 Protein denotes of SIGIRR
T16218 876-897 Protein denotes SIGIRR-deficient mice
T16217 750-775 Protein denotes of inflammatory cytokines
T16216 381-386 Protein denotes IL-1R
T16215 1258-1264 Protein denotes SIGIRR
T16214 575-591 Entity denotes epithelial cells
T16213 22-43 Protein denotes IL-1 receptor-related
T16212 776-802 Entity denotes by human RA synovial cells
T16211 330-340 Protein denotes TRAF6 [67]
T16210 1314-1316 Protein denotes RA
T16209 487-489 Protein denotes RA
T16208 446-453 Protein denotes RA [68]
T16207 1199-1201 Protein denotes RA
T16206 97-103 Protein denotes SIGIRR
T16205 593-602 Entity denotes monocytes
T16204 832-838 Protein denotes SIGIRR
T16203 933-948 Entity denotes zymosan-induced
T16202 314-319 Protein denotes MyD88
T16201 52-112 Protein denotes Single-immunoglobulin IL-1 receptor-related (SIGIRR) protein
R10735 T16202 T16240 themeOf MyD88,"direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1)"
R10736 T16211 T16240 themeOf TRAF6 [67],"direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1)"
R10737 T16212 T16242 causeOf by human RA synovial cells,the spontaneous release of inflammatory cytokines by human RA synovial cells
R10738 T16217 T16242 themeOf of inflammatory cytokines,the spontaneous release of inflammatory cytokines by human RA synovial cells
R10739 T16230 T16241 themeOf of SIGIRR,to compare the expression of SIGIRR in RA patients with its expression in control
R10740 T16233 T16240 themeOf IRAK1,"direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1)"
R10741 T16236 T16245 themeOf SIGIRR,SIGIRR overexpression
R10742 T16236 T16246 themeOf SIGIRR,SIGIRR overexpression
R10743 T16237 T16240 themeOf these receptors,"direct interaction with these receptors, MyD88, IRAK1 or TRAF6 [67] (Figure 1)"
R10744 T16242 T16243 themeOf the spontaneous release of inflammatory cytokines by human RA synovial cells,"Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells"
R10745 T16242 T16244 themeOf the spontaneous release of inflammatory cytokines by human RA synovial cells,"Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells"
R10746 T16245 T16244 causeOf SIGIRR overexpression,"Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells"
R10747 T16246 T16243 causeOf SIGIRR overexpression,"Recently, SIGIRR overexpression was shown to inhibit the spontaneous release of inflammatory cytokines by human RA synovial cells"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T15812 1238-1248 Gene_expression denotes expression
T15811 1258-1264 Protein denotes SIGIRR
T15810 1174-1180 Protein denotes SIGIRR
T15809 971-979 Protein denotes collagen
T15808 832-838 Protein denotes SIGIRR
T15807 690-704 Positive_regulation denotes overexpression
T15806 690-704 Gene_expression denotes overexpression
T15805 683-689 Protein denotes SIGIRR
T15804 373-377 Positive_regulation denotes role
T15803 373-377 Positive_regulation denotes role
T15802 477-483 Protein denotes SIGIRR
T15801 391-394 Protein denotes TLR
T15800 381-386 Protein denotes IL-1R
T15799 217-226 Negative_regulation denotes inhibitor
T15798 217-226 Negative_regulation denotes inhibitor
T15797 280-291 Binding denotes interaction
T15796 280-291 Binding denotes interaction
T15795 330-335 Protein denotes TRAF6
T15794 321-326 Protein denotes IRAK1
T15793 314-319 Protein denotes MyD88
T15792 240-243 Protein denotes TLR
T15791 230-235 Protein denotes IL-1R
T15790 154-170 Protein denotes TLR/IL-1R family
T15789 128-133 Protein denotes TIR-8
T15788 52-87 Protein denotes Single-immunoglobulin IL-1 receptor
T15787 0-35 Protein denotes Single-immunoglobulin IL-1 receptor
R10427 T15788 T15796 themeOf Single-immunoglobulin IL-1 receptor,interaction
R10429 T15794 T15796 themeOf IRAK1,interaction
R10428 T15788 T15797 themeOf Single-immunoglobulin IL-1 receptor,interaction
R10430 T15795 T15797 themeOf TRAF6,interaction
R10431 T15796 T15798 themeOf interaction,inhibitor
R10432 T15797 T15799 themeOf interaction,inhibitor
R10433 T15800 T15803 themeOf IL-1R,role
R10434 T15801 T15804 themeOf TLR,role
R10435 T15805 T15806 themeOf SIGIRR,overexpression
R10436 T15806 T15807 themeOf overexpression,overexpression
R10437 T15811 T15812 themeOf SIGIRR,expression

test3

Id Subject Object Predicate Lexical cue
T15482 1258-1264 Protein denotes SIGIRR
T15481 1174-1180 Protein denotes SIGIRR
T15480 1100-1110 Gene_expression denotes expression
T15479 1069-1075 Protein denotes SIGIRR
T15478 1055-1065 Gene_expression denotes expression
T15477 883-892 Negative_regulation denotes deficient
T15476 876-882 Protein denotes SIGIRR
T15475 832-838 Protein denotes SIGIRR
T15474 683-689 Protein denotes SIGIRR
T15473 562-571 Gene_expression denotes expressed
T15472 507-513 Protein denotes SIGIRR
T15471 477-483 Protein denotes SIGIRR
T15470 381-386 Protein denotes IL-1R
T15469 330-335 Protein denotes TRAF6
T15468 321-326 Protein denotes IRAK1
T15467 314-319 Protein denotes MyD88
T15466 280-291 Binding denotes interaction
T15465 230-235 Protein denotes IL-1R
T15464 217-226 Negative_regulation denotes inhibitor
T15463 128-133 Protein denotes TIR-8
T15462 97-103 Protein denotes SIGIRR
T15461 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15460 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15459 1258-1264 Protein denotes SIGIRR
T15458 1174-1180 Protein denotes SIGIRR
T15457 1069-1075 Protein denotes SIGIRR
T15456 876-882 Protein denotes SIGIRR
T15455 832-838 Protein denotes SIGIRR
T15454 683-689 Protein denotes SIGIRR
T15453 507-513 Protein denotes SIGIRR
T15452 477-483 Protein denotes SIGIRR
T15451 381-386 Protein denotes IL-1R
T15450 330-335 Protein denotes TRAF6
T15449 321-326 Protein denotes IRAK1
T15448 314-319 Protein denotes MyD88
T15447 230-235 Protein denotes IL-1R
T15446 128-133 Protein denotes TIR-8
T15445 97-103 Protein denotes SIGIRR
T15444 52-95 Protein denotes Single-immunoglobulin IL-1 receptor-related
T15443 0-43 Protein denotes Single-immunoglobulin IL-1 receptor-related
R10167 T15461 T15466 themeOf Single-immunoglobulin IL-1 receptor-related,interaction
R10168 T15462 T15461 equivalentTo SIGIRR,Single-immunoglobulin IL-1 receptor-related
R10169 T15463 T15466 themeOf TIR-8,interaction
R10170 T15463 T15461 equivalentTo TIR-8,Single-immunoglobulin IL-1 receptor-related
R10171 T15465 T15466 themeOf IL-1R,interaction
R10172 T15467 T15466 themeOf MyD88,interaction
R10173 T15468 T15466 themeOf IRAK1,interaction
R10174 T15469 T15466 themeOf TRAF6,interaction
R10175 T15472 T15473 themeOf SIGIRR,expressed
R10176 T15476 T15477 themeOf SIGIRR,deficient
R10177 T15479 T15478 themeOf SIGIRR,expression
R10178 T15479 T15480 themeOf SIGIRR,expression