PMC:3218875 / 26275-27334
Annnotations
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14064 | 488-491 | Positive_regulation | denotes | via |
T14063 | 455-464 | Binding | denotes | recruited |
T14062 | 421-428 | Positive_regulation | denotes | induced |
T14061 | 360-370 | Gene_expression | denotes | expression |
T14060 | 318-325 | Gene_expression | denotes | produce |
T14058 | 969-973 | Protein | denotes | CYLD |
T14057 | 860-864 | Protein | denotes | RANK |
T14056 | 831-835 | Protein | denotes | CYLD |
T14055 | 718-721 | Protein | denotes | p62 |
T14054 | 621-626 | Protein | denotes | TRAF6 |
T14053 | 587-591 | Protein | denotes | CYLD |
T14052 | 549-563 | Protein | denotes | sequestosome 1 |
T14051 | 530-533 | Protein | denotes | p62 |
T14050 | 496-505 | Protein | denotes | ubiquitin |
T14049 | 482-487 | Protein | denotes | TRAF6 |
T14048 | 415-420 | Protein | denotes | RANKL |
T14047 | 355-359 | Protein | denotes | CYLD |
T14046 | 284-289 | Protein | denotes | RANKL |
T14045 | 145-149 | Protein | denotes | CYLD |
T14044 | 58-62 | Protein | denotes | RANK |
T14043 | 15-19 | Protein | denotes | CYLD |
R9296 | T14047 | T14061 | themeOf | CYLD,expression |
R9297 | T14049 | T14063 | themeOf | TRAF6,recruited |
R9298 | T14052 | T14063 | themeOf | sequestosome 1,recruited |
R9299 | T14052 | T14064 | causeOf | sequestosome 1,via |
R9300 | T14063 | T14064 | themeOf | recruited,via |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15018 | 1058-1059 | . | denotes | . |
T15017 | 1056-1058 | NNP | denotes | RA |
T15016 | 1053-1055 | IN | denotes | as |
T15015 | 1048-1052 | JJ | denotes | such |
T15014 | 1038-1047 | NNS | denotes | disorders |
T15013 | 1033-1037 | NN | denotes | bone |
T15012 | 1030-1032 | IN | denotes | of |
T15011 | 1020-1029 | NN | denotes | pathology |
T15010 | 1016-1019 | DT | denotes | the |
T15009 | 1013-1015 | IN | denotes | in |
T15008 | 1004-1012 | VBN | denotes | involved |
T15007 | 997-1003 | NN | denotes | factor |
T15006 | 989-996 | JJ | denotes | genetic |
T15005 | 979-988 | JJ | denotes | potential |
T15004 | 977-978 | DT | denotes | a |
T15003 | 974-976 | IN | denotes | as |
T15002 | 969-973 | NNP | denotes | CYLD |
T15001 | 960-968 | VBP | denotes | indicate |
T15000 | 956-959 | CC | denotes | and |
T14999 | 937-955 | NN | denotes | osteoclastogenesis |
T14998 | 934-936 | IN | denotes | of |
T14997 | 923-933 | NN | denotes | regulation |
T14996 | 914-922 | JJ | denotes | negative |
T14995 | 910-913 | DT | denotes | the |
T14994 | 907-909 | IN | denotes | in |
T14993 | 902-906 | NN | denotes | role |
T14992 | 898-901 | JJ | denotes | key |
T14991 | 896-897 | DT | denotes | a |
T14990 | 890-895 | NNS | denotes | plays |
T14989 | 879-889 | VBG | denotes | signalling |
T14988 | 873-878 | NN | denotes | NF-κB |
T14987 | 860-872 | JJ | denotes | RANK-induced |
T14986 | 857-859 | IN | denotes | of |
T14985 | 845-856 | NN | denotes | inhibi-tion |
T14984 | 831-844 | JJ | denotes | CYLD-mediated |
T14983 | 826-830 | IN | denotes | that |
T14982 | 818-825 | VBP | denotes | suggest |
T14981 | 809-817 | NNS | denotes | findings |
T14980 | 803-808 | DT | denotes | These |
T14979 | 801-802 | . | denotes | . |
T14978 | 800-801 | NNP | denotes | ] |
T14977 | 798-800 | CD | denotes | 66 |
T14976 | 797-798 | NNP | denotes | [ |
T14975 | 792-796 | NN | denotes | loss |
T14974 | 787-791 | NN | denotes | bone |
T14973 | 775-786 | JJ | denotes | progressive |
T14972 | 767-774 | VB | denotes | develop |
T14971 | 763-766 | CC | denotes | and |
T14970 | 744-762 | NN | denotes | osteoclastogenesis |
T14969 | 735-743 | JJ | denotes | abnormal |
T14968 | 727-734 | NN | denotes | display |
T14967 | 722-726 | RB | denotes | also |
T14966 | 718-721 | CD | denotes | p62 |
T14965 | 715-717 | IN | denotes | of |
T14964 | 710-714 | NN | denotes | form |
T14963 | 702-709 | VBN | denotes | mutated |
T14962 | 700-701 | DT | denotes | a |
T14961 | 689-699 | VBG | denotes | expressing |
T14960 | 684-688 | NNS | denotes | mice |
T14959 | 673-683 | JJ | denotes | transgenic |
T14958 | 668-672 | IN | denotes | that |
T14957 | 657-667 | VBG | denotes | mentioning |
T14956 | 651-656 | JJ | denotes | worth |
T14955 | 648-650 | VBZ | denotes | is |
T14954 | 645-647 | PRP | denotes | it |
T14953 | 643-644 | , | denotes | , |
T14952 | 636-643 | NN | denotes | context |
T14951 | 631-635 | DT | denotes | this |
T14950 | 628-630 | IN | denotes | In |
T14949 | 626-627 | . | denotes | . |
T14948 | 621-626 | CD | denotes | TRAF6 |
T14947 | 618-620 | IN | denotes | of |
T14946 | 601-617 | NN | denotes | deubiquitination |
T14945 | 587-600 | JJ | denotes | CYLD-mediated |
T14944 | 583-586 | DT | denotes | the |
T14943 | 580-582 | IN | denotes | by |
T14942 | 571-579 | VBN | denotes | followed |
T14941 | 569-570 | , | denotes | , |
T14940 | 568-569 | NNP | denotes | ] |
T14939 | 566-568 | CD | denotes | 65 |
T14938 | 565-566 | NNP | denotes | [ |
T14937 | 563-564 | -RRB- | denotes | ) |
T14936 | 562-563 | CD | denotes | 1 |
T14935 | 549-561 | JJ | denotes | sequestosome |
T14934 | 546-548 | IN | denotes | as |
T14933 | 540-545 | VBN | denotes | known |
T14932 | 535-539 | RB | denotes | also |
T14931 | 534-535 | -LRB- | denotes | ( |
T14930 | 530-533 | NN | denotes | p62 |
T14929 | 522-529 | NN | denotes | protein |
T14928 | 514-521 | NN | denotes | adaptor |
T14927 | 496-513 | JJ | denotes | ubiquitin-binding |
T14926 | 492-495 | DT | denotes | the |
T14925 | 488-491 | IN | denotes | via |
T14924 | 482-487 | CD | denotes | TRAF6 |
T14923 | 468-481 | VBN | denotes | ubiquitinated |
T14922 | 465-467 | TO | denotes | to |
T14921 | 455-464 | VBN | denotes | recruited |
T14920 | 452-454 | VBZ | denotes | is |
T14919 | 448-451 | CC | denotes | and |
T14918 | 429-447 | NN | denotes | osteoclastogenesis |
T14917 | 415-428 | JJ | denotes | RANKL-induced |
T14916 | 412-414 | IN | denotes | of |
T14915 | 401-411 | NNS | denotes | conditions |
T14914 | 395-400 | IN | denotes | under |
T14913 | 383-394 | VBN | denotes | upregulated |
T14912 | 374-382 | RB | denotes | markedly |
T14911 | 371-373 | VBZ | denotes | is |
T14910 | 360-370 | NN | denotes | expression |
T14909 | 355-359 | NNP | denotes | CYLD |
T14908 | 353-354 | . | denotes | . |
T14907 | 342-353 | NNS | denotes | osteoclasts |
T14906 | 335-341 | JJR | denotes | larger |
T14905 | 331-334 | CC | denotes | and |
T14904 | 326-330 | JJR | denotes | more |
T14903 | 318-325 | VB | denotes | produce |
T14902 | 314-317 | CC | denotes | and |
T14901 | 298-313 | NN | denotes | differentiation |
T14900 | 284-297 | JJ | denotes | RANKL-induced |
T14899 | 281-283 | TO | denotes | to |
T14898 | 264-280 | JJ | denotes | hyper-responsive |
T14897 | 260-263 | VBP | denotes | are |
T14896 | 255-259 | NNS | denotes | mice |
T14895 | 249-254 | DT | denotes | these |
T14894 | 246-248 | IN | denotes | of |
T14893 | 235-245 | NNS | denotes | precursors |
T14892 | 224-234 | NNP | denotes | Osteoclast |
T14891 | 222-223 | . | denotes | . |
T14890 | 210-222 | NN | denotes | osteoporosis |
T14889 | 203-209 | JJ | denotes | severe |
T14888 | 195-202 | VB | denotes | develop |
T14887 | 191-194 | CC | denotes | and |
T14886 | 175-190 | NN | denotes | differentiation |
T14885 | 164-174 | NN | denotes | osteoclast |
T14884 | 155-163 | JJ | denotes | aberrant |
T14883 | 150-154 | VBP | denotes | have |
T14882 | 145-149 | NNP | denotes | CYLD |
T14881 | 142-144 | IN | denotes | of |
T14880 | 131-141 | NN | denotes | deficiency |
T14879 | 123-130 | JJ | denotes | genetic |
T14878 | 121-122 | DT | denotes | a |
T14877 | 116-120 | IN | denotes | with |
T14876 | 111-115 | NN | denotes | Mice |
T14875 | 109-110 | . | denotes | . |
T14874 | 108-109 | NNP | denotes | ] |
T14873 | 106-108 | CD | denotes | 65 |
T14872 | 105-106 | NNP | denotes | [ |
T14871 | 100-104 | NNS | denotes | mice |
T14870 | 97-99 | IN | denotes | in |
T14869 | 78-96 | NN | denotes | osteoclastogenesis |
T14868 | 74-77 | CC | denotes | and |
T14867 | 63-73 | NN | denotes | signalling |
T14866 | 58-62 | NNP | denotes | RANK |
T14865 | 49-57 | VB | denotes | regulate |
T14864 | 38-48 | RB | denotes | negatively |
T14863 | 35-37 | TO | denotes | to |
T14862 | 29-34 | VBN | denotes | shown |
T14861 | 24-28 | VBN | denotes | been |
T14860 | 20-23 | VBZ | denotes | has |
T14859 | 15-19 | NNP | denotes | CYLD |
T14858 | 13-14 | , | denotes | , |
T14857 | 0-13 | RB | denotes | Interestingly |
R9879 | T14857 | T14862 | advmod | Interestingly,shown |
R9880 | T14858 | T14862 | punct | ",",shown |
R9881 | T14859 | T14862 | nsubjpass | CYLD,shown |
R9882 | T14860 | T14862 | aux | has,shown |
R9883 | T14861 | T14862 | auxpass | been,shown |
R9884 | T14862 | T14862 | ROOT | shown,shown |
R9885 | T14863 | T14865 | aux | to,regulate |
R9886 | T14864 | T14865 | advmod | negatively,regulate |
R9887 | T14865 | T14862 | xcomp | regulate,shown |
R9888 | T14866 | T14867 | compound | RANK,signalling |
R9889 | T14867 | T14865 | dobj | signalling,regulate |
R9890 | T14868 | T14867 | cc | and,signalling |
R9891 | T14869 | T14867 | conj | osteoclastogenesis,signalling |
R9892 | T14870 | T14867 | prep | in,signalling |
R9893 | T14871 | T14870 | pobj | mice,in |
R9894 | T14872 | T14874 | nmod | [,] |
R9895 | T14873 | T14874 | nummod | 65,] |
R9896 | T14874 | T14867 | appos | ],signalling |
R9897 | T14875 | T14862 | punct | .,shown |
R9898 | T14876 | T14883 | nsubj | Mice,have |
R9899 | T14877 | T14876 | prep | with,Mice |
R9900 | T14878 | T14880 | det | a,deficiency |
R9901 | T14879 | T14880 | amod | genetic,deficiency |
R9902 | T14880 | T14877 | pobj | deficiency,with |
R9903 | T14881 | T14880 | prep | of,deficiency |
R9904 | T14882 | T14881 | pobj | CYLD,of |
R9905 | T14883 | T14883 | ROOT | have,have |
R9906 | T14884 | T14886 | amod | aberrant,differentiation |
R9907 | T14885 | T14886 | compound | osteoclast,differentiation |
R9908 | T14886 | T14883 | dobj | differentiation,have |
R9909 | T14887 | T14883 | cc | and,have |
R9910 | T14888 | T14883 | conj | develop,have |
R9911 | T14889 | T14890 | amod | severe,osteoporosis |
R9912 | T14890 | T14888 | dobj | osteoporosis,develop |
R9913 | T14891 | T14883 | punct | .,have |
R9914 | T14892 | T14897 | dep | Osteoclast,are |
R9915 | T14893 | T14897 | nsubj | precursors,are |
R9916 | T14894 | T14893 | prep | of,precursors |
R9917 | T14895 | T14896 | det | these,mice |
R9918 | T14896 | T14894 | pobj | mice,of |
R9919 | T14897 | T14897 | ROOT | are,are |
R9920 | T14898 | T14897 | acomp | hyper-responsive,are |
R9921 | T14899 | T14898 | prep | to,hyper-responsive |
R9922 | T14900 | T14901 | amod | RANKL-induced,differentiation |
R9923 | T14901 | T14899 | pobj | differentiation,to |
R9924 | T14902 | T14897 | cc | and,are |
R9925 | T14903 | T14897 | conj | produce,are |
R9926 | T14904 | T14907 | amod | more,osteoclasts |
R9927 | T14905 | T14904 | cc | and,more |
R9928 | T14906 | T14904 | conj | larger,more |
R9929 | T14907 | T14903 | dobj | osteoclasts,produce |
R9930 | T14908 | T14897 | punct | .,are |
R9931 | T14909 | T14910 | compound | CYLD,expression |
R9932 | T14910 | T14913 | nsubjpass | expression,upregulated |
R9933 | T14911 | T14913 | auxpass | is,upregulated |
R9934 | T14912 | T14913 | advmod | markedly,upregulated |
R9935 | T14913 | T14913 | ROOT | upregulated,upregulated |
R9936 | T14914 | T14913 | prep | under,upregulated |
R9937 | T14915 | T14914 | pobj | conditions,under |
R9938 | T14916 | T14915 | prep | of,conditions |
R9939 | T14917 | T14918 | compound | RANKL-induced,osteoclastogenesis |
R9940 | T14918 | T14916 | pobj | osteoclastogenesis,of |
R9941 | T14919 | T14913 | cc | and,upregulated |
R9942 | T14920 | T14921 | auxpass | is,recruited |
R9943 | T14921 | T14913 | conj | recruited,upregulated |
R9944 | T14922 | T14921 | prep | to,recruited |
R9945 | T14923 | T14924 | amod | ubiquitinated,TRAF6 |
R9946 | T14924 | T14922 | pobj | TRAF6,to |
R9947 | T14925 | T14921 | prep | via,recruited |
R9948 | T14926 | T14929 | det | the,protein |
R9949 | T14927 | T14929 | amod | ubiquitin-binding,protein |
R9955 | T14933 | T14930 | acl | known,p62 |
R9956 | T14934 | T14933 | prep | as,known |
R9957 | T14935 | T14934 | pobj | sequestosome,as |
R9958 | T14936 | T14935 | nummod | 1,sequestosome |
R9959 | T14937 | T14930 | punct | ),p62 |
R9960 | T14938 | T14940 | nmod | [,] |
R9961 | T14939 | T14940 | nummod | 65,] |
R9962 | T14940 | T14940 | ROOT | ],] |
R9963 | T14941 | T14940 | punct | ",",] |
R9964 | T14942 | T14940 | acl | followed,] |
R9965 | T14943 | T14942 | agent | by,followed |
R9966 | T14944 | T14946 | det | the,deubiquitination |
R9967 | T14945 | T14946 | amod | CYLD-mediated,deubiquitination |
R9968 | T14946 | T14943 | pobj | deubiquitination,by |
R9969 | T14947 | T14946 | prep | of,deubiquitination |
R9970 | T14948 | T14947 | pobj | TRAF6,of |
R9971 | T14949 | T14913 | punct | .,upregulated |
R9972 | T14950 | T14955 | prep | In,is |
R9973 | T14951 | T14952 | det | this,context |
R9974 | T14952 | T14950 | pobj | context,In |
R9975 | T14953 | T14955 | punct | ",",is |
R9976 | T14954 | T14955 | nsubj | it,is |
R9977 | T14955 | T14955 | ROOT | is,is |
R9978 | T14956 | T14955 | acomp | worth,is |
R9979 | T14957 | T14956 | xcomp | mentioning,worth |
R9980 | T14958 | T14968 | mark | that,display |
R9981 | T14959 | T14960 | amod | transgenic,mice |
R9982 | T14960 | T14968 | nsubj | mice,display |
R9983 | T14961 | T14960 | acl | expressing,mice |
R9984 | T14962 | T14964 | det | a,form |
R9985 | T14963 | T14964 | amod | mutated,form |
R9986 | T14964 | T14961 | dobj | form,expressing |
R9987 | T14965 | T14964 | prep | of,form |
R9988 | T14966 | T14965 | pobj | p62,of |
R9989 | T14967 | T14968 | advmod | also,display |
R9990 | T14968 | T14955 | ccomp | display,is |
R9991 | T14969 | T14970 | amod | abnormal,osteoclastogenesis |
R9992 | T14970 | T14968 | dobj | osteoclastogenesis,display |
R9993 | T14971 | T14968 | cc | and,display |
R9994 | T14972 | T14968 | conj | develop,display |
R9995 | T14973 | T14975 | amod | progressive,loss |
R9996 | T14974 | T14975 | compound | bone,loss |
R9997 | T14975 | T14972 | dobj | loss,develop |
R9998 | T14976 | T14978 | nmod | [,] |
R9999 | T14977 | T14978 | nummod | 66,] |
R10000 | T14978 | T14975 | appos | ],loss |
R10001 | T14979 | T14955 | punct | .,is |
R10002 | T14980 | T14981 | det | These,findings |
R10003 | T14981 | T14982 | nsubj | findings,suggest |
R10004 | T14982 | T14982 | ROOT | suggest,suggest |
R10005 | T14983 | T15001 | mark | that,indicate |
R10006 | T14984 | T14985 | amod | CYLD-mediated,inhibi-tion |
R10007 | T14985 | T15001 | nsubj | inhibi-tion,indicate |
R10008 | T14986 | T14985 | prep | of,inhibi-tion |
R10009 | T14987 | T14988 | amod | RANK-induced,NF-κB |
R10010 | T14988 | T14989 | nsubj | NF-κB,signalling |
R10011 | T14989 | T14986 | pcomp | signalling,of |
R10012 | T14990 | T14989 | dobj | plays,signalling |
R10013 | T14991 | T14993 | det | a,role |
R10014 | T14992 | T14993 | amod | key,role |
R10015 | T14993 | T14989 | oprd | role,signalling |
R10016 | T14994 | T14993 | prep | in,role |
R10017 | T14995 | T14997 | det | the,regulation |
R10018 | T14996 | T14997 | amod | negative,regulation |
R10019 | T14997 | T14994 | pobj | regulation,in |
R10020 | T14998 | T14997 | prep | of,regulation |
R10021 | T14999 | T14998 | pobj | osteoclastogenesis,of |
R10022 | T15000 | T14989 | cc | and,signalling |
R10023 | T15001 | T14982 | ccomp | indicate,suggest |
R10029 | T15007 | T15003 | pobj | factor,as |
R10030 | T15008 | T15007 | acl | involved,factor |
R10031 | T15009 | T15008 | prep | in,involved |
R10032 | T15010 | T15011 | det | the,pathology |
R10033 | T15011 | T15009 | pobj | pathology,in |
R10034 | T15012 | T15011 | prep | of,pathology |
R10035 | T15013 | T15014 | compound | bone,disorders |
R10036 | T15014 | T15012 | pobj | disorders,of |
R10037 | T15015 | T15016 | amod | such,as |
R10038 | T15016 | T15014 | prep | as,disorders |
R10039 | T15017 | T15016 | pobj | RA,as |
R10040 | T15018 | T14982 | punct | .,suggest |
R9950 | T14928 | T14929 | compound | adaptor,protein |
R9951 | T14929 | T14925 | pobj | protein,via |
R9952 | T14930 | T14921 | conj | p62,recruited |
R9953 | T14931 | T14933 | punct | (,known |
R9954 | T14932 | T14933 | advmod | also,known |
R10024 | T15002 | T15001 | dobj | CYLD,indicate |
R10025 | T15003 | T15001 | prep | as,indicate |
R10026 | T15004 | T15007 | det | a,factor |
R10027 | T15005 | T15007 | amod | potential,factor |
R10028 | T15006 | T15007 | amod | genetic,factor |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15108 | 360-370 | Gene_expression | denotes | expression |
T15107 | 131-141 | Negative_regulation | denotes | deficiency |
T15105 | 969-973 | Protein | denotes | CYLD |
T15104 | 860-864 | Protein | denotes | RANK |
T15103 | 831-835 | Protein | denotes | CYLD |
T15102 | 718-721 | Protein | denotes | p62 |
T15101 | 621-626 | Protein | denotes | TRAF6 |
T15100 | 587-591 | Protein | denotes | CYLD |
T15099 | 549-563 | Protein | denotes | sequestosome 1 |
T15098 | 530-533 | Protein | denotes | p62 |
T15097 | 496-505 | Protein | denotes | ubiquitin |
T15096 | 482-487 | Protein | denotes | TRAF6 |
T15095 | 415-420 | Protein | denotes | RANKL |
T15094 | 355-359 | Protein | denotes | CYLD |
T15093 | 284-289 | Protein | denotes | RANKL |
T15092 | 145-149 | Protein | denotes | CYLD |
T15091 | 58-62 | Protein | denotes | RANK |
T15090 | 15-19 | Protein | denotes | CYLD |
T15114 | 689-699 | Gene_expression | denotes | expressing |
T15113 | 601-617 | Negative_regulation | denotes | deubiquitination |
T15112 | 506-513 | Binding | denotes | binding |
T15111 | 468-481 | Positive_regulation | denotes | ubiquitinated |
T15110 | 455-464 | Binding | denotes | recruited |
T15109 | 383-394 | Positive_regulation | denotes | upregulated |
R10052 | T15092 | T15107 | themeOf | CYLD,deficiency |
R10053 | T15094 | T15108 | themeOf | CYLD,expression |
R10054 | T15096 | T15110 | themeOf | TRAF6,recruited |
R10055 | T15096 | T15111 | themeOf | TRAF6,ubiquitinated |
R10056 | T15097 | T15112 | themeOf | ubiquitin,binding |
R10057 | T15098 | T15110 | themeOf | p62,recruited |
R10058 | T15098 | T15112 | themeOf | p62,binding |
R10059 | T15101 | T15113 | themeOf | TRAF6,deubiquitination |
R10060 | T15102 | T15114 | themeOf | p62,expressing |
R10061 | T15108 | T15109 | themeOf | expression,upregulated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15028 | 549-563 | http://www.uniprot.org/uniprot/Q13501 | denotes | sequestosome 1 |
T15023 | 621-626 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
T15022 | 482-487 | http://www.uniprot.org/uniprot/Q9Y4K3 | denotes | TRAF6 |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14243 | 969-973 | Protein | denotes | CYLD |
T14242 | 860-864 | Protein | denotes | RANK |
T14241 | 831-835 | Protein | denotes | CYLD |
T14240 | 718-721 | Protein | denotes | p62 |
T14239 | 621-626 | Protein | denotes | TRAF6 |
T14238 | 587-591 | Protein | denotes | CYLD |
T14237 | 549-563 | Protein | denotes | sequestosome 1 |
T14236 | 530-533 | Protein | denotes | p62 |
T14235 | 496-505 | Protein | denotes | ubiquitin |
T14234 | 482-487 | Protein | denotes | TRAF6 |
T14233 | 415-420 | Protein | denotes | RANKL |
T14232 | 355-359 | Protein | denotes | CYLD |
T14231 | 284-289 | Protein | denotes | RANKL |
T14230 | 145-149 | Protein | denotes | CYLD |
T14229 | 58-62 | Protein | denotes | RANK |
T14228 | 15-19 | Protein | denotes | CYLD |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
21639951-18382763-4289495 | 106-108 | 18382763 | denotes | 65 |
21639951-18382763-4289496 | 566-568 | 18382763 | denotes | 65 |
21639951-17187080-4289497 | 798-800 | 17187080 | denotes | 66 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14577 | 1056-1058 | NN | denotes | RA |
T14576 | 1053-1055 | IN | denotes | as |
T14575 | 1048-1052 | JJ | denotes | such |
T14574 | 1038-1047 | NN | denotes | disorders |
T14573 | 1033-1037 | NN | denotes | bone |
T14572 | 1030-1032 | IN | denotes | of |
T14571 | 1020-1029 | NN | denotes | pathology |
T14570 | 1016-1019 | DT | denotes | the |
T14569 | 1013-1015 | IN | denotes | in |
T14568 | 1004-1012 | VB | denotes | involved |
T14567 | 997-1003 | NN | denotes | factor |
T14566 | 989-996 | JJ | denotes | genetic |
T14565 | 979-988 | JJ | denotes | potential |
T14564 | 977-978 | DT | denotes | a |
T14563 | 974-976 | IN | denotes | as |
T14562 | 969-973 | NN | denotes | CYLD |
T14561 | 960-968 | VB | denotes | indicate |
T14560 | 956-959 | CC | denotes | and |
T14559 | 937-955 | NN | denotes | osteoclastogenesis |
T14558 | 934-936 | IN | denotes | of |
T14557 | 923-933 | NN | denotes | regulation |
T14556 | 914-922 | JJ | denotes | negative |
T14555 | 910-913 | DT | denotes | the |
T14554 | 907-909 | IN | denotes | in |
T14553 | 902-906 | NN | denotes | role |
T14552 | 898-901 | JJ | denotes | key |
T14551 | 896-897 | DT | denotes | a |
T14550 | 890-895 | VB | denotes | plays |
T14549 | 879-889 | NN | denotes | signalling |
T14548 | 873-878 | NN | denotes | NF-κB |
T14547 | 860-872 | JJ | denotes | RANK-induced |
T14546 | 857-859 | IN | denotes | of |
T14545 | 845-856 | NN | denotes | inhibi-tion |
T14544 | 831-844 | JJ | denotes | CYLD-mediated |
T14543 | 826-830 | IN | denotes | that |
T14542 | 818-825 | VB | denotes | suggest |
T14541 | 809-817 | NN | denotes | findings |
T14540 | 803-808 | DT | denotes | These |
T14539 | 800-801 | -RRB- | denotes | ] |
T14538 | 798-800 | CD | denotes | 66 |
T14537 | 797-798 | -LRB- | denotes | [ |
T14536 | 792-796 | NN | denotes | loss |
T14535 | 787-791 | NN | denotes | bone |
T14534 | 775-786 | JJ | denotes | progressive |
T14533 | 767-774 | VB | denotes | develop |
T14532 | 763-766 | CC | denotes | and |
T14531 | 744-762 | NN | denotes | osteoclastogenesis |
T14530 | 735-743 | JJ | denotes | abnormal |
T14529 | 727-734 | VB | denotes | display |
T14528 | 722-726 | RB | denotes | also |
T14527 | 718-721 | NN | denotes | p62 |
T14526 | 715-717 | IN | denotes | of |
T14525 | 710-714 | NN | denotes | form |
T14524 | 702-709 | VB | denotes | mutated |
T14523 | 700-701 | DT | denotes | a |
T14522 | 689-699 | VB | denotes | expressing |
T14521 | 684-688 | NN | denotes | mice |
T14520 | 673-683 | JJ | denotes | transgenic |
T14519 | 668-672 | IN | denotes | that |
T14518 | 657-667 | VB | denotes | mentioning |
T14517 | 651-656 | JJ | denotes | worth |
T14516 | 648-650 | VB | denotes | is |
T14515 | 645-647 | PRP | denotes | it |
T14514 | 643-644 | -COMMA- | denotes | , |
T14513 | 636-643 | NN | denotes | context |
T14512 | 631-635 | DT | denotes | this |
T14511 | 628-630 | IN | denotes | In |
T14510 | 621-626 | NN | denotes | TRAF6 |
T14509 | 618-620 | IN | denotes | of |
T14508 | 601-617 | NN | denotes | deubiquitination |
T14507 | 587-600 | JJ | denotes | CYLD-mediated |
T14506 | 583-586 | DT | denotes | the |
T14505 | 580-582 | IN | denotes | by |
T14504 | 571-579 | VB | denotes | followed |
T14503 | 569-570 | -COMMA- | denotes | , |
T14502 | 568-569 | -RRB- | denotes | ] |
T14501 | 566-568 | CD | denotes | 65 |
T14500 | 565-566 | -LRB- | denotes | [ |
T14499 | 563-564 | -RRB- | denotes | ) |
T14498 | 562-563 | CD | denotes | 1 |
T14497 | 549-561 | NN | denotes | sequestosome |
T14496 | 546-548 | IN | denotes | as |
T14495 | 540-545 | VB | denotes | known |
T14494 | 535-539 | RB | denotes | also |
T14493 | 534-535 | -LRB- | denotes | ( |
T14492 | 530-533 | NN | denotes | p62 |
T14491 | 522-529 | NN | denotes | protein |
T14490 | 514-521 | NN | denotes | adaptor |
T14489 | 496-513 | JJ | denotes | ubiquitin-binding |
T14488 | 492-495 | DT | denotes | the |
T14487 | 488-491 | IN | denotes | via |
T14486 | 482-487 | NN | denotes | TRAF6 |
T14485 | 468-481 | VB | denotes | ubiquitinated |
T14484 | 465-467 | TO | denotes | to |
T14483 | 455-464 | VB | denotes | recruited |
T14482 | 452-454 | VB | denotes | is |
T14481 | 448-451 | CC | denotes | and |
T14480 | 429-447 | NN | denotes | osteoclastogenesis |
T14479 | 415-428 | JJ | denotes | RANKL-induced |
T14478 | 412-414 | IN | denotes | of |
T14477 | 401-411 | NN | denotes | conditions |
T14476 | 395-400 | IN | denotes | under |
T14475 | 383-394 | VB | denotes | upregulated |
T14474 | 374-382 | RB | denotes | markedly |
T14473 | 371-373 | VB | denotes | is |
T14472 | 360-370 | NN | denotes | expression |
T14471 | 355-359 | NN | denotes | CYLD |
T14470 | 342-353 | NN | denotes | osteoclasts |
T14469 | 335-341 | JJ | denotes | larger |
T14468 | 331-334 | CC | denotes | and |
T14467 | 326-330 | JJ | denotes | more |
T14466 | 318-325 | VB | denotes | produce |
T14465 | 314-317 | CC | denotes | and |
T14464 | 298-313 | NN | denotes | differentiation |
T14463 | 284-297 | JJ | denotes | RANKL-induced |
T14462 | 281-283 | TO | denotes | to |
T14461 | 264-280 | JJ | denotes | hyper-responsive |
T14460 | 260-263 | VB | denotes | are |
T14459 | 255-259 | NN | denotes | mice |
T14458 | 249-254 | DT | denotes | these |
T14457 | 246-248 | IN | denotes | of |
T14456 | 235-245 | NN | denotes | precursors |
T14455 | 224-234 | NN | denotes | Osteoclast |
T14454 | 210-222 | NN | denotes | osteoporosis |
T14453 | 203-209 | JJ | denotes | severe |
T14452 | 195-202 | VB | denotes | develop |
T14451 | 191-194 | CC | denotes | and |
T14450 | 175-190 | NN | denotes | differentiation |
T14449 | 164-174 | NN | denotes | osteoclast |
T14448 | 155-163 | JJ | denotes | aberrant |
T14447 | 150-154 | VB | denotes | have |
T14446 | 145-149 | NN | denotes | CYLD |
T14445 | 142-144 | IN | denotes | of |
T14444 | 131-141 | NN | denotes | deficiency |
T14443 | 123-130 | JJ | denotes | genetic |
T14442 | 121-122 | DT | denotes | a |
T14441 | 116-120 | IN | denotes | with |
T14440 | 111-115 | NN | denotes | Mice |
T14439 | 108-109 | -RRB- | denotes | ] |
T14438 | 106-108 | CD | denotes | 65 |
T14437 | 105-106 | -LRB- | denotes | [ |
T14436 | 100-104 | NN | denotes | mice |
T14435 | 97-99 | IN | denotes | in |
T14434 | 78-96 | NN | denotes | osteoclastogenesis |
T14433 | 74-77 | CC | denotes | and |
T14432 | 63-73 | NN | denotes | signalling |
T14431 | 58-62 | NN | denotes | RANK |
T14430 | 49-57 | VB | denotes | regulate |
T14429 | 38-48 | RB | denotes | negatively |
T14428 | 35-37 | TO | denotes | to |
T14427 | 29-34 | VB | denotes | shown |
T14426 | 24-28 | VB | denotes | been |
T14425 | 20-23 | VB | denotes | has |
T14424 | 15-19 | NN | denotes | CYLD |
T14423 | 13-14 | -COMMA- | denotes | , |
T14422 | 0-13 | RB | denotes | Interestingly |
R9626 | T14515 | T14516 | arg1Of | it,is |
R9627 | T14515 | T14517 | arg1Of | it,worth |
R9628 | T14516 | T14511 | arg1Of | is,In |
R9529 | T14424 | T14425 | arg1Of | CYLD,has |
R9530 | T14424 | T14426 | arg1Of | CYLD,been |
R9531 | T14424 | T14427 | arg2Of | CYLD,shown |
R9532 | T14424 | T14430 | arg1Of | CYLD,regulate |
R9533 | T14427 | T14422 | arg1Of | shown,Interestingly |
R9534 | T14427 | T14423 | arg1Of | shown,"," |
R9535 | T14427 | T14425 | arg2Of | shown,has |
R9536 | T14427 | T14426 | arg2Of | shown,been |
R9537 | T14430 | T14427 | arg3Of | regulate,shown |
R9538 | T14430 | T14428 | arg1Of | regulate,to |
R9539 | T14430 | T14429 | arg1Of | regulate,negatively |
R9540 | T14432 | T14431 | arg1Of | signalling,RANK |
R9541 | T14432 | T14433 | arg1Of | signalling,and |
R9542 | T14433 | T14430 | arg2Of | and,regulate |
R9543 | T14433 | T14435 | arg1Of | and,in |
R9544 | T14434 | T14433 | arg2Of | osteoclastogenesis,and |
R9545 | T14436 | T14435 | arg2Of | mice,in |
R9546 | T14436 | T14437 | arg1Of | mice,[ |
R9547 | T14438 | T14437 | arg2Of | 65,[ |
R9548 | T14439 | T14437 | arg3Of | ],[ |
R9549 | T14440 | T14441 | arg1Of | Mice,with |
R9550 | T14440 | T14447 | arg1Of | Mice,have |
R9551 | T14440 | T14452 | arg1Of | Mice,develop |
R9552 | T14444 | T14441 | arg2Of | deficiency,with |
R9553 | T14444 | T14442 | arg1Of | deficiency,a |
R9554 | T14444 | T14443 | arg1Of | deficiency,genetic |
R9555 | T14444 | T14445 | arg1Of | deficiency,of |
R9556 | T14446 | T14445 | arg2Of | CYLD,of |
R9557 | T14447 | T14451 | arg1Of | have,and |
R9558 | T14450 | T14447 | arg2Of | differentiation,have |
R9559 | T14450 | T14448 | arg1Of | differentiation,aberrant |
R9560 | T14450 | T14449 | arg1Of | differentiation,osteoclast |
R9561 | T14452 | T14451 | arg2Of | develop,and |
R9562 | T14454 | T14452 | arg2Of | osteoporosis,develop |
R9563 | T14454 | T14453 | arg1Of | osteoporosis,severe |
R9564 | T14456 | T14455 | arg1Of | precursors,Osteoclast |
R9565 | T14456 | T14457 | arg1Of | precursors,of |
R9566 | T14456 | T14460 | arg1Of | precursors,are |
R9567 | T14456 | T14461 | arg1Of | precursors,hyper-responsive |
R9568 | T14456 | T14466 | arg1Of | precursors,produce |
R9569 | T14459 | T14457 | arg2Of | mice,of |
R9570 | T14459 | T14458 | arg1Of | mice,these |
R9571 | T14460 | T14465 | arg1Of | are,and |
R9572 | T14461 | T14460 | arg2Of | hyper-responsive,are |
R9573 | T14461 | T14462 | arg1Of | hyper-responsive,to |
R9574 | T14464 | T14462 | arg2Of | differentiation,to |
R9575 | T14464 | T14463 | arg1Of | differentiation,RANKL-induced |
R9576 | T14466 | T14465 | arg2Of | produce,and |
R9577 | T14467 | T14468 | arg1Of | more,and |
R9578 | T14469 | T14468 | arg2Of | larger,and |
R9579 | T14470 | T14466 | arg2Of | osteoclasts,produce |
R9580 | T14470 | T14467 | arg1Of | osteoclasts,more |
R9581 | T14470 | T14469 | arg1Of | osteoclasts,larger |
R9582 | T14472 | T14471 | arg1Of | expression,CYLD |
R9583 | T14472 | T14473 | arg1Of | expression,is |
R9584 | T14472 | T14475 | arg2Of | expression,upregulated |
R9585 | T14472 | T14482 | arg1Of | expression,is |
R9586 | T14472 | T14483 | arg2Of | expression,recruited |
R9587 | T14475 | T14473 | arg2Of | upregulated,is |
R9588 | T14475 | T14474 | arg1Of | upregulated,markedly |
R9589 | T14475 | T14476 | arg1Of | upregulated,under |
R9590 | T14475 | T14481 | arg1Of | upregulated,and |
R9591 | T14477 | T14476 | arg2Of | conditions,under |
R9592 | T14477 | T14478 | arg1Of | conditions,of |
R9593 | T14480 | T14478 | arg2Of | osteoclastogenesis,of |
R9594 | T14480 | T14479 | arg1Of | osteoclastogenesis,RANKL-induced |
R9595 | T14481 | T14503 | arg1Of | and,"," |
R9596 | T14481 | T14504 | modOf | and,followed |
R9597 | T14483 | T14481 | arg2Of | recruited,and |
R9598 | T14483 | T14482 | arg2Of | recruited,is |
R9599 | T14483 | T14484 | arg1Of | recruited,to |
R9600 | T14483 | T14487 | arg1Of | recruited,via |
R9601 | T14483 | T14500 | arg1Of | recruited,[ |
R9602 | T14486 | T14484 | arg2Of | TRAF6,to |
R9603 | T14486 | T14485 | arg2Of | TRAF6,ubiquitinated |
R9604 | T14492 | T14487 | arg2Of | p62,via |
R9605 | T14492 | T14488 | arg1Of | p62,the |
R9606 | T14492 | T14489 | arg1Of | p62,ubiquitin-binding |
R9607 | T14492 | T14490 | arg1Of | p62,adaptor |
R9608 | T14492 | T14491 | arg1Of | p62,protein |
R9609 | T14492 | T14493 | arg1Of | p62,( |
R9610 | T14495 | T14493 | arg2Of | known,( |
R9611 | T14495 | T14494 | arg1Of | known,also |
R9612 | T14495 | T14496 | arg1Of | known,as |
R9613 | T14497 | T14496 | arg2Of | sequestosome,as |
R9614 | T14497 | T14498 | arg1Of | sequestosome,1 |
R9615 | T14499 | T14493 | arg3Of | ),( |
R9616 | T14501 | T14500 | arg2Of | 65,[ |
R9617 | T14502 | T14500 | arg3Of | ],[ |
R9618 | T14508 | T14504 | arg1Of | deubiquitination,followed |
R9619 | T14508 | T14505 | arg2Of | deubiquitination,by |
R9620 | T14508 | T14506 | arg1Of | deubiquitination,the |
R9621 | T14508 | T14507 | arg1Of | deubiquitination,CYLD-mediated |
R9622 | T14508 | T14509 | arg1Of | deubiquitination,of |
R9623 | T14510 | T14509 | arg2Of | TRAF6,of |
R9624 | T14513 | T14511 | arg2Of | context,In |
R9625 | T14513 | T14512 | arg1Of | context,this |
R9629 | T14516 | T14514 | arg1Of | is,"," |
R9630 | T14517 | T14516 | arg2Of | worth,is |
R9631 | T14518 | T14517 | arg2Of | mentioning,worth |
R9632 | T14521 | T14520 | arg1Of | mice,transgenic |
R9633 | T14521 | T14522 | arg1Of | mice,expressing |
R9634 | T14521 | T14529 | arg1Of | mice,display |
R9635 | T14521 | T14533 | arg1Of | mice,develop |
R9636 | T14525 | T14522 | arg2Of | form,expressing |
R9637 | T14525 | T14523 | arg1Of | form,a |
R9638 | T14525 | T14524 | arg2Of | form,mutated |
R9639 | T14525 | T14526 | arg1Of | form,of |
R9640 | T14527 | T14526 | arg2Of | p62,of |
R9641 | T14529 | T14532 | arg1Of | display,and |
R9642 | T14531 | T14529 | arg2Of | osteoclastogenesis,display |
R9643 | T14531 | T14530 | arg1Of | osteoclastogenesis,abnormal |
R9644 | T14532 | T14518 | arg2Of | and,mentioning |
R9645 | T14532 | T14519 | arg1Of | and,that |
R9646 | T14532 | T14528 | arg1Of | and,also |
R9647 | T14533 | T14532 | arg2Of | develop,and |
R9648 | T14533 | T14537 | arg1Of | develop,[ |
R9649 | T14536 | T14533 | arg2Of | loss,develop |
R9650 | T14536 | T14534 | arg1Of | loss,progressive |
R9651 | T14536 | T14535 | arg1Of | loss,bone |
R9652 | T14538 | T14537 | arg2Of | 66,[ |
R9653 | T14539 | T14537 | arg3Of | ],[ |
R9654 | T14541 | T14540 | arg1Of | findings,These |
R9655 | T14541 | T14542 | arg1Of | findings,suggest |
R9656 | T14545 | T14544 | arg1Of | inhibi-tion,CYLD-mediated |
R9657 | T14545 | T14546 | arg1Of | inhibi-tion,of |
R9658 | T14545 | T14550 | arg1Of | inhibi-tion,plays |
R9659 | T14545 | T14561 | arg1Of | inhibi-tion,indicate |
R9660 | T14549 | T14546 | arg2Of | signalling,of |
R9661 | T14549 | T14547 | arg1Of | signalling,RANK-induced |
R9662 | T14549 | T14548 | arg1Of | signalling,NF-κB |
R9663 | T14550 | T14554 | arg1Of | plays,in |
R9664 | T14550 | T14560 | arg1Of | plays,and |
R9665 | T14553 | T14550 | arg2Of | role,plays |
R9666 | T14553 | T14551 | arg1Of | role,a |
R9667 | T14553 | T14552 | arg1Of | role,key |
R9668 | T14557 | T14554 | arg2Of | regulation,in |
R9669 | T14557 | T14555 | arg1Of | regulation,the |
R9670 | T14557 | T14556 | arg1Of | regulation,negative |
R9671 | T14557 | T14558 | arg1Of | regulation,of |
R9672 | T14559 | T14558 | arg2Of | osteoclastogenesis,of |
R9673 | T14560 | T14542 | arg2Of | and,suggest |
R9674 | T14560 | T14543 | arg1Of | and,that |
R9675 | T14561 | T14560 | arg2Of | indicate,and |
R9676 | T14561 | T14563 | arg1Of | indicate,as |
R9677 | T14562 | T14561 | arg2Of | CYLD,indicate |
R9678 | T14567 | T14563 | arg2Of | factor,as |
R9679 | T14567 | T14564 | arg1Of | factor,a |
R9680 | T14567 | T14565 | arg1Of | factor,potential |
R9681 | T14567 | T14566 | arg1Of | factor,genetic |
R9682 | T14567 | T14568 | arg2Of | factor,involved |
R9683 | T14568 | T14569 | arg1Of | involved,in |
R9684 | T14571 | T14569 | arg2Of | pathology,in |
R9685 | T14571 | T14570 | arg1Of | pathology,the |
R9686 | T14571 | T14572 | arg1Of | pathology,of |
R9687 | T14574 | T14572 | arg2Of | disorders,of |
R9688 | T14574 | T14573 | arg1Of | disorders,bone |
R9689 | T14574 | T14576 | arg1Of | disorders,as |
R9690 | T14576 | T14575 | arg1Of | as,such |
R9691 | T14577 | T14576 | arg2Of | RA,as |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14593 | 923-933 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
T14592 | 601-617 | http://purl.obolibrary.org/obo/GO_0016579 | denotes | deubiquitination |
T14591 | 164-190 | http://purl.obolibrary.org/obo/GO_0030316 | denotes | osteoclast differentiation |
T14589 | 879-889 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
T14588 | 63-73 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14599 | 506-513 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T14598 | 496-513 | http://purl.obolibrary.org/obo/GO_0043130 | denotes | ubiquitin-binding |
T14597 | 496-505 | http://purl.obolibrary.org/obo/GO_0031386 | denotes | ubiquitin |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14151 | 803-1059 | Sentence | denotes | These findings suggest that CYLD-mediated inhibi-tion of RANK-induced NF-κB signalling plays a key role in the negative regulation of osteoclastogenesis and indicate CYLD as a potential genetic factor involved in the pathology of bone disorders such as RA. |
T14150 | 628-802 | Sentence | denotes | In this context, it is worth mentioning that transgenic mice expressing a mutated form of p62 also display abnormal osteoclastogenesis and develop progressive bone loss [66]. |
T14149 | 355-627 | Sentence | denotes | CYLD expression is markedly upregulated under conditions of RANKL-induced osteoclastogenesis and is recruited to ubiquitinated TRAF6 via the ubiquitin-binding adaptor protein p62 (also known as sequestosome 1) [65], followed by the CYLD-mediated deubiquitination of TRAF6. |
T14148 | 224-354 | Sentence | denotes | Osteoclast precursors of these mice are hyper-responsive to RANKL-induced differentiation and produce more and larger osteoclasts. |
T14147 | 111-223 | Sentence | denotes | Mice with a genetic deficiency of CYLD have aberrant osteoclast differentiation and develop severe osteoporosis. |
T14146 | 0-110 | Sentence | denotes | Interestingly, CYLD has been shown to negatively regulate RANK signalling and osteoclastogenesis in mice [65]. |
T146 | 0-110 | Sentence | denotes | Interestingly, CYLD has been shown to negatively regulate RANK signalling and osteoclastogenesis in mice [65]. |
T147 | 111-223 | Sentence | denotes | Mice with a genetic deficiency of CYLD have aberrant osteoclast differentiation and develop severe osteoporosis. |
T148 | 224-354 | Sentence | denotes | Osteoclast precursors of these mice are hyper-responsive to RANKL-induced differentiation and produce more and larger osteoclasts. |
T149 | 355-627 | Sentence | denotes | CYLD expression is markedly upregulated under conditions of RANKL-induced osteoclastogenesis and is recruited to ubiquitinated TRAF6 via the ubiquitin-binding adaptor protein p62 (also known as sequestosome 1) [65], followed by the CYLD-mediated deubiquitination of TRAF6. |
T150 | 628-802 | Sentence | denotes | In this context, it is worth mentioning that transgenic mice expressing a mutated form of p62 also display abnormal osteoclastogenesis and develop progressive bone loss [66]. |
T151 | 803-1059 | Sentence | denotes | These findings suggest that CYLD-mediated inhibi-tion of RANK-induced NF-κB signalling plays a key role in the negative regulation of osteoclastogenesis and indicate CYLD as a potential genetic factor involved in the pathology of bone disorders such as RA. |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14595 | 1033-1047 | http://purl.bioontology.org/ontology/ICD10/M89.9 | denotes | bone disorders |
T14594 | 210-222 | http://purl.bioontology.org/ontology/ICD10/M81.9 | denotes | osteoporosis |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14638 | 969-973 | Protein | denotes | CYLD |
T14637 | 860-864 | Protein | denotes | RANK |
T14636 | 831-835 | Protein | denotes | CYLD |
T14635 | 718-721 | Protein | denotes | p62 |
T14634 | 621-626 | Protein | denotes | TRAF6 |
T14633 | 587-591 | Protein | denotes | CYLD |
T14632 | 549-563 | Protein | denotes | sequestosome 1 |
T14631 | 530-533 | Protein | denotes | p62 |
T14630 | 496-505 | Protein | denotes | ubiquitin |
T14629 | 482-487 | Protein | denotes | TRAF6 |
T14628 | 415-420 | Protein | denotes | RANKL |
T14627 | 355-359 | Protein | denotes | CYLD |
T14626 | 284-289 | Protein | denotes | RANKL |
T14625 | 145-149 | Protein | denotes | CYLD |
T14624 | 58-62 | Protein | denotes | RANK |
T14623 | 15-19 | Protein | denotes | CYLD |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15301 | 689-699 | Gene_expression | denotes | expressing |
T15300 | 360-370 | Gene_expression | denotes | expression |
T15299 | 506-513 | Binding | denotes | binding |
T15298 | 601-617 | Negative_regulation | denotes | deubiquitination |
T15297 | 383-394 | Positive_regulation | denotes | upregulated |
T15296 | 131-141 | Negative_regulation | denotes | deficiency |
T15293 | 969-973 | Protein | denotes | CYLD |
T15292 | 860-864 | Protein | denotes | RANK |
T15291 | 831-835 | Protein | denotes | CYLD |
T15290 | 718-721 | Protein | denotes | p62 |
T15289 | 621-626 | Protein | denotes | TRAF6 |
T15288 | 587-591 | Protein | denotes | CYLD |
T15287 | 549-563 | Protein | denotes | sequestosome 1 |
T15286 | 530-533 | Protein | denotes | p62 |
T15285 | 496-505 | Protein | denotes | ubiquitin |
T15284 | 482-487 | Protein | denotes | TRAF6 |
T15283 | 415-420 | Protein | denotes | RANKL |
T15282 | 355-359 | Protein | denotes | CYLD |
T15281 | 284-289 | Protein | denotes | RANKL |
T15280 | 145-149 | Protein | denotes | CYLD |
T15279 | 58-62 | Protein | denotes | RANK |
T15278 | 15-19 | Protein | denotes | CYLD |
R10135 | T15280 | T15296 | themeOf | CYLD,deficiency |
R10136 | T15282 | T15300 | themeOf | CYLD,expression |
R10137 | T15285 | T15299 | themeOf | ubiquitin,binding |
R10138 | T15286 | T15299 | themeOf | p62,binding |
R10139 | T15286 | T15300 | themeOf | p62,expression |
R10140 | T15289 | T15298 | themeOf | TRAF6,deubiquitination |
R10141 | T15290 | T15301 | themeOf | p62,expressing |
R10142 | T15300 | T15297 | themeOf | expression,upregulated |
R10143 | T15300 | T15297 | themeOf | expression,upregulated |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15071 | 689-699 | Gene_expression | denotes | expressing |
T15069 | 383-394 | Positive_regulation | denotes | upregulated |
T15068 | 455-464 | Binding | denotes | recruited |
T15067 | 601-617 | Negative_regulation | denotes | deubiquitination |
T15066 | 360-370 | Gene_expression | denotes | expression |
T15065 | 290-297 | Positive_regulation | denotes | induced |
T15064 | 131-141 | Negative_regulation | denotes | deficiency |
T15062 | 969-973 | Protein | denotes | CYLD |
T15061 | 860-864 | Protein | denotes | RANK |
T15060 | 831-835 | Protein | denotes | CYLD |
T15059 | 718-721 | Protein | denotes | p62 |
T15058 | 621-626 | Protein | denotes | TRAF6 |
T15057 | 587-591 | Protein | denotes | CYLD |
T15056 | 549-563 | Protein | denotes | sequestosome 1 |
T15055 | 530-533 | Protein | denotes | p62 |
T15054 | 496-505 | Protein | denotes | ubiquitin |
T15053 | 482-487 | Protein | denotes | TRAF6 |
T15052 | 415-420 | Protein | denotes | RANKL |
T15051 | 355-359 | Protein | denotes | CYLD |
T15050 | 284-289 | Protein | denotes | RANKL |
T15049 | 145-149 | Protein | denotes | CYLD |
T15048 | 58-62 | Protein | denotes | RANK |
T15047 | 15-19 | Protein | denotes | CYLD |
T15070 | 506-513 | Binding | denotes | binding |
R10042 | T15049 | T15064 | themeOf | CYLD,deficiency |
R10043 | T15050 | T15065 | themeOf | RANKL,induced |
R10044 | T15051 | T15066 | themeOf | CYLD,expression |
R10045 | T15054 | T15070 | themeOf | ubiquitin,binding |
R10046 | T15055 | T15068 | themeOf | p62,recruited |
R10047 | T15055 | T15070 | themeOf | p62,binding |
R10048 | T15058 | T15067 | themeOf | TRAF6,deubiquitination |
R10049 | T15059 | T15071 | themeOf | p62,expressing |
R10050 | T15066 | T15069 | themeOf | expression,upregulated |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15367 | 468-487 | Ubiquitination | denotes | ubiquitinated TRAF6 |
T15365 | 0-109 | Regulation | denotes | Interestingly, CYLD has been shown to negatively regulate RANK signalling and osteoclastogenesis in mice [65] |
T15362 | 580-626 | Regulation | denotes | by the CYLD-mediated deubiquitination of TRAF6 |
T15361 | 355-370 | Gene_expression | denotes | CYLD expression |
T15357 | 415-428 | Protein | denotes | RANKL-induced |
T15356 | 831-844 | Protein | denotes | CYLD-mediated |
T15353 | 715-721 | Protein | denotes | of p62 |
T15352 | 224-259 | Entity | denotes | Osteoclast precursors of these mice |
T15351 | 1033-1058 | Protein | denotes | bone disorders such as RA |
T15346 | 969-973 | Protein | denotes | CYLD |
T15345 | 58-109 | Protein | denotes | RANK signalling and osteoclastogenesis in mice [65] |
T15343 | 15-19 | Protein | denotes | CYLD |
T15341 | 549-563 | Protein | denotes | sequestosome 1 |
T15337 | 142-149 | Protein | denotes | of CYLD |
T15334 | 618-626 | Protein | denotes | of TRAF6 |
T15330 | 468-487 | Protein | denotes | ubiquitinated TRAF6 |
T15327 | 860-889 | Protein | denotes | RANK-induced NF-κB signalling |
T15326 | 335-353 | Entity | denotes | larger osteoclasts |
T15325 | 514-533 | Protein | denotes | adaptor protein p62 |
T15323 | 111-149 | Protein | denotes | Mice with a genetic deficiency of CYLD |
T15322 | 860-872 | Protein | denotes | RANK-induced |
T15320 | 514-533 | Protein | denotes | adaptor protein p62 |
T15318 | 492-513 | Protein | denotes | the ubiquitin-binding |
T15314 | 355-359 | Protein | denotes | CYLD |
T15312 | 587-600 | Protein | denotes | CYLD-mediated |
T15311 | 284-289 | Protein | denotes | RANKL |
T15303 | 100-109 | Protein | denotes | mice [65] |
R10148 | T15312 | T15362 | causeOf | CYLD-mediated,by the CYLD-mediated deubiquitination of TRAF6 |
R10149 | T15314 | T15361 | themeOf | CYLD,CYLD expression |
R10151 | T15330 | T15367 | themeOf | ubiquitinated TRAF6,ubiquitinated TRAF6 |
R10153 | T15343 | T15365 | causeOf | CYLD,"Interestingly, CYLD has been shown to negatively regulate RANK signalling and osteoclastogenesis in mice [65]" |
R10154 | T15345 | T15365 | themeOf | RANK signalling and osteoclastogenesis in mice [65],"Interestingly, CYLD has been shown to negatively regulate RANK signalling and osteoclastogenesis in mice [65]" |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15167 | 969-973 | Protein | denotes | CYLD |
T15166 | 873-878 | Protein | denotes | NF-κB |
T15165 | 860-864 | Protein | denotes | RANK |
T15164 | 689-699 | Gene_expression | denotes | expressing |
T15163 | 718-721 | Protein | denotes | p62 |
T15162 | 455-464 | Negative_regulation | denotes | recruited |
T15161 | 383-394 | Positive_regulation | denotes | upregulated |
T15160 | 360-370 | Gene_expression | denotes | expression |
T15159 | 621-626 | Protein | denotes | TRAF6 |
T15158 | 530-533 | Protein | denotes | p62 |
T15157 | 496-505 | Protein | denotes | ubiquitin |
T15156 | 468-487 | Protein | denotes | ubiquitinated TRAF6 |
T15155 | 415-420 | Protein | denotes | RANKL |
T15154 | 355-359 | Protein | denotes | CYLD |
T15153 | 284-289 | Protein | denotes | RANKL |
T15152 | 131-141 | Negative_regulation | denotes | deficiency |
T15151 | 145-149 | Protein | denotes | CYLD |
T15150 | 49-57 | Regulation | denotes | regulate |
T15149 | 58-62 | Protein | denotes | RANK |
T15148 | 15-19 | Protein | denotes | CYLD |
R10087 | T15149 | T15150 | themeOf | RANK,regulate |
R10088 | T15150 | T15148 | Cause | regulate,CYLD |
R10089 | T15151 | T15152 | themeOf | CYLD,deficiency |
R10090 | T15154 | T15160 | themeOf | CYLD,expression |
R10091 | T15160 | T15161 | themeOf | expression,upregulated |
R10092 | T15160 | T15162 | themeOf | expression,recruited |
R10093 | T15163 | T15164 | themeOf | p62,expressing |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14138 | 969-973 | Protein | denotes | CYLD |
T14137 | 860-864 | Protein | denotes | RANK |
T14136 | 831-835 | Protein | denotes | CYLD |
T14135 | 718-721 | Protein | denotes | p62 |
T14134 | 621-626 | Protein | denotes | TRAF6 |
T14133 | 592-600 | Positive_regulation | denotes | mediated |
T14132 | 587-591 | Protein | denotes | CYLD |
T14131 | 549-563 | Protein | denotes | sequestosome 1 |
T14130 | 530-533 | Protein | denotes | p62 |
T14129 | 506-513 | Binding | denotes | binding |
T14128 | 496-505 | Protein | denotes | ubiquitin |
T14127 | 488-491 | Positive_regulation | denotes | via |
T14126 | 482-487 | Protein | denotes | TRAF6 |
T14125 | 455-464 | Binding | denotes | recruited |
T14124 | 421-428 | Positive_regulation | denotes | induced |
T14123 | 415-420 | Protein | denotes | RANKL |
T14122 | 355-359 | Protein | denotes | CYLD |
T14121 | 284-289 | Protein | denotes | RANKL |
T14120 | 145-149 | Protein | denotes | CYLD |
T14119 | 58-62 | Protein | denotes | RANK |
T14118 | 15-19 | Protein | denotes | CYLD |
T14098 | 969-973 | Protein | denotes | CYLD |
T14097 | 860-864 | Protein | denotes | RANK |
T14096 | 831-835 | Protein | denotes | CYLD |
T14095 | 718-721 | Protein | denotes | p62 |
T14094 | 621-626 | Protein | denotes | TRAF6 |
T14093 | 587-591 | Protein | denotes | CYLD |
T14092 | 549-563 | Protein | denotes | sequestosome 1 |
T14091 | 530-533 | Protein | denotes | p62 |
T14090 | 496-505 | Protein | denotes | ubiquitin |
T14089 | 482-487 | Protein | denotes | TRAF6 |
T14088 | 415-420 | Protein | denotes | RANKL |
T14087 | 355-359 | Protein | denotes | CYLD |
T14086 | 284-289 | Protein | denotes | RANKL |
T14085 | 145-149 | Protein | denotes | CYLD |
T14084 | 58-62 | Protein | denotes | RANK |
T14083 | 15-19 | Protein | denotes | CYLD |
R9306 | T14118 | T14119 | themeOf | CYLD,RANK |
R9307 | T14123 | T14124 | causeOf | RANKL,induced |
R9308 | T14126 | T14125 | themeOf | TRAF6,recruited |
R9309 | T14130 | T14129 | themeOf | p62,binding |
R9310 | T14131 | T14127 | causeOf | sequestosome 1,via |
R9311 | T14132 | T14133 | causeOf | CYLD,mediated |