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PMC:3218875 / 23696-23840 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T12555 94-101 Negative_regulation denotes lacking
T12554 56-63 Gene_expression denotes express
T12553 21-30 Gene_expression denotes expressed
T12530 66-93 Protein denotes truncated and inactive form
T12529 11-17 Protein denotes ABIN-3
R8308 T12529 T12554 themeOf ABIN-3,express
R8309 T12529 T12553 themeOf ABIN-3,expressed

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13372 143-144 . denotes .
T13371 142-143 NNP denotes ]
T13370 140-142 CD denotes 57
T13369 139-140 NNP denotes [
T13368 132-138 NN denotes domain
T13367 114-131 JJ denotes ubiquitin-binding
T13366 106-113 JJ denotes crucial
T13365 102-105 DT denotes the
T13364 94-101 VBG denotes lacking
T13363 89-93 NN denotes form
T13362 80-88 JJ denotes inactive
T13361 76-79 CC denotes and
T13360 66-75 VBN denotes truncated
T13359 64-65 DT denotes a
T13358 56-63 VB denotes express
T13357 51-55 RB denotes only
T13356 46-50 NNS denotes mice
T13355 42-45 CC denotes but
T13354 40-41 , denotes ,
T13353 34-40 NNS denotes humans
T13352 31-33 IN denotes in
T13351 21-30 VBN denotes expressed
T13350 18-20 VBZ denotes is
T13349 11-17 NNP denotes ABIN-3
T13348 0-10 NNP denotes Functional
R8899 T13348 T13349 compound Functional,ABIN-3
R8900 T13349 T13351 nsubjpass ABIN-3,expressed
R8901 T13350 T13351 auxpass is,expressed
R8902 T13351 T13351 ROOT expressed,expressed
R8903 T13352 T13351 prep in,expressed
R8904 T13353 T13352 pobj humans,in
R8905 T13354 T13351 punct ",",expressed
R8906 T13355 T13351 cc but,expressed
R8907 T13356 T13358 nsubj mice,express
R8908 T13357 T13358 advmod only,express
R8909 T13358 T13351 conj express,expressed
R8910 T13359 T13363 det a,form
R8911 T13360 T13363 amod truncated,form
R8912 T13361 T13360 cc and,truncated
R8913 T13362 T13360 conj inactive,truncated
R8914 T13363 T13358 dobj form,express
R8915 T13364 T13363 acl lacking,form
R8916 T13365 T13368 det the,domain
R8917 T13366 T13368 amod crucial,domain
R8918 T13367 T13368 compound ubiquitin-binding,domain
R8919 T13368 T13364 dobj domain,lacking
R8920 T13369 T13371 nmod [,]
R8921 T13370 T13371 nummod 57,]
R8922 T13371 T13368 appos ],domain
R8923 T13372 T13358 punct .,express

DLUT931

Id Subject Object Predicate Lexical cue
T13718 94-101 Negative_regulation denotes lacking
T13717 114-131 Binding denotes ubiquitin-binding
T13716 56-63 Gene_expression denotes express
T13715 21-30 Gene_expression denotes expressed
T13692 66-93 Protein denotes truncated and inactive form
T13691 11-17 Protein denotes ABIN-3
R9195 T13692 T13717 themeOf truncated and inactive form,ubiquitin-binding
R9192 T13691 T13715 themeOf ABIN-3,expressed
R9193 T13691 T13717 themeOf ABIN-3,ubiquitin-binding
R9194 T13692 T13716 themeOf truncated and inactive form,express
R9206 T13717 T13718 themeOf ubiquitin-binding,lacking

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T12723 66-93 Protein denotes truncated and inactive form
T12722 11-17 Protein denotes ABIN-3

2_test

Id Subject Object Predicate Lexical cue
21639951-17088249-4289484 140-142 17088249 denotes 57

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12890 142-143 -RRB- denotes ]
T12889 140-142 CD denotes 57
T12888 139-140 -LRB- denotes [
T12887 132-138 NN denotes domain
T12886 114-131 JJ denotes ubiquitin-binding
T12885 106-113 JJ denotes crucial
T12884 102-105 DT denotes the
T12883 94-101 VB denotes lacking
T12882 89-93 NN denotes form
T12881 80-88 JJ denotes inactive
T12880 76-79 CC denotes and
T12879 66-75 VB denotes truncated
T12878 64-65 DT denotes a
T12877 56-63 VB denotes express
T12876 51-55 RB denotes only
T12875 46-50 NN denotes mice
T12874 42-45 CC denotes but
T12873 40-41 -COMMA- denotes ,
T12872 34-40 NN denotes humans
T12871 31-33 IN denotes in
T12870 21-30 VB denotes expressed
T12869 18-20 VB denotes is
T12868 11-17 NN denotes ABIN-3
T12867 0-10 JJ denotes Functional
R8502 T12868 T12867 arg1Of ABIN-3,Functional
R8503 T12868 T12869 arg1Of ABIN-3,is
R8504 T12868 T12870 arg2Of ABIN-3,expressed
R8505 T12870 T12869 arg2Of expressed,is
R8506 T12870 T12871 arg1Of expressed,in
R8507 T12870 T12874 arg1Of expressed,but
R8508 T12872 T12871 arg2Of humans,in
R8509 T12874 T12873 arg1Of but,","
R8510 T12875 T12877 arg1Of mice,express
R8511 T12877 T12874 arg2Of express,but
R8512 T12877 T12876 arg1Of express,only
R8513 T12879 T12880 arg1Of truncated,and
R8514 T12881 T12880 arg2Of inactive,and
R8515 T12882 T12877 arg2Of form,express
R8516 T12882 T12878 arg1Of form,a
R8517 T12882 T12879 arg1Of form,truncated
R8518 T12882 T12881 arg1Of form,inactive
R8519 T12882 T12883 arg1Of form,lacking
R8520 T12887 T12883 arg2Of domain,lacking
R8521 T12887 T12884 arg1Of domain,the
R8522 T12887 T12885 arg1Of domain,crucial
R8523 T12887 T12886 arg1Of domain,ubiquitin-binding
R8524 T12887 T12888 arg1Of domain,[
R8525 T12889 T12888 arg2Of 57,[
R8526 T12890 T12888 arg3Of ],[

GO-MF

Id Subject Object Predicate Lexical cue
T13150 114-131 http://purl.obolibrary.org/obo/GO_0043130 denotes ubiquitin-binding
T13148 114-123 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin
T13146 124-131 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T12647 0-144 Sentence denotes Functional ABIN-3 is expressed in humans, but mice only express a truncated and inactive form lacking the crucial ubiquitin-binding domain [57].
T131 0-144 Sentence denotes Functional ABIN-3 is expressed in humans, but mice only express a truncated and inactive form lacking the crucial ubiquitin-binding domain [57].

simple1

Id Subject Object Predicate Lexical cue
T13187 66-93 Protein denotes truncated and inactive form
T13186 11-17 Protein denotes ABIN-3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T13883 56-63 Gene_expression denotes express
T13882 21-30 Gene_expression denotes expressed
T13860 66-93 Protein denotes truncated and inactive form
T13859 11-17 Protein denotes ABIN-3
R9274 T13859 T13882 themeOf ABIN-3,expressed
R9275 T13860 T13883 themeOf truncated and inactive form,express

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13668 56-63 Gene_expression denotes express
T13667 21-30 Gene_expression denotes expressed
T13666 94-101 Negative_regulation denotes lacking
T13645 66-93 Protein denotes truncated and inactive form
T13644 11-17 Protein denotes ABIN-3
R9165 T13644 T13667 themeOf ABIN-3,expressed
R9166 T13645 T13668 themeOf truncated and inactive form,express
R9167 T13645 T13666 themeOf truncated and inactive form,lacking

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T13957 0-40 Gene_expression denotes Functional ABIN-3 is expressed in humans
T13912 46-50 Protein denotes mice
T13902 0-17 Protein denotes Functional ABIN-3
T13895 114-143 Entity denotes ubiquitin-binding domain [57]
T13893 66-93 Protein denotes truncated and inactive form
R9284 T13902 T13957 themeOf Functional ABIN-3,Functional ABIN-3 is expressed in humans

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13783 114-123 Protein denotes ubiquitin

test3

Id Subject Object Predicate Lexical cue
T12621 123-138 Entity denotes -binding domain
T12620 66-93 Protein denotes truncated and inactive form
T12619 21-30 Gene_expression denotes expressed
T12618 11-17 Protein denotes ABIN-3
T12581 66-93 Protein denotes truncated and inactive form
T12580 11-17 Protein denotes ABIN-3
R8330 T12618 T12620 themeOf ABIN-3,truncated and inactive form
R8331 T12618 T12619 themeOf ABIN-3,expressed
R8332 T12619 T12620 themeOf expressed,truncated and inactive form